| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yaiN [C]
Identifier: 21244776
GI number: 21244776
Start: 4755187
End: 4755459
Strand: Reverse
Name: yaiN [C]
Synonym: XAC4059
Alternate gene names: 21244776
Gene position: 4755459-4755187 (Counterclockwise)
Preceding gene: 21244778
Following gene: 21244774
Centisome position: 91.88
GC content: 63.37
Gene sequence:
>273_bases ATGGCACATCTCAATCAGGACAAATCCAGACTGCTCGCGCGCGTGCGCAGGATCCGCGGGCAGGTGGAAGGGCTGGAAAA AGCCCTGGCGCAGGACGTGGACTGCACCGCGTTGCTGACCCAGGTGGCCGCGTTTCGCGGCGCGGCGCAAGGCTTGATGG TCGAGTTGCTCAGCGAGCATCTGAAGCATCACGTCGCCGCACCCGAGGCACCGGGCGAGCGTGAGCTGGCGGTGGATGAC ATCACCGCCATCCTCAAGACCTATCTGAAGTAA
Upstream 100 bases:
>100_bases TGGGTGCAATGCGGCGCGGCGTGCGTGATCGACATCGGCGGTGGCTCTGGCTAAGGTACCCCCACAGGGTATCCTAAATA CCCCTGGGGGGTATACGGCG
Downstream 100 bases:
>100_bases GCGCGGCCGACAGACAATTGCGCCCACCCTGGGCCGGCTGTGGTCCATGCGCGTGGCACGGTCTGCATGGGCGGGTCGCG CCCCGTCGTTCTAACGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MAHLNQDKSRLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPEAPGERELAVDD ITAILKTYLK
Sequences:
>Translated_90_residues MAHLNQDKSRLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPEAPGERELAVDD ITAILKTYLK >Mature_89_residues AHLNQDKSRLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPEAPGERELAVDDI TAILKTYLK
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI87081725, Length=92, Percent_Identity=42.3913043478261, Blast_Score=77, Evalue=3e-16, Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=40, Blast_Score=69, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 9882; Mature: 9750
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLNQDKSRLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LKHHVAAPEAPGERELAVDDITAILKTYLK HHHHHCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AHLNQDKSRLLARVRRIRGQVEGLEKALAQDVDCTALLTQVAAFRGAAQGLMVELLSEH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LKHHVAAPEAPGERELAVDDITAILKTYLK HHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA