| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244760
Identifier: 21244760
GI number: 21244760
Start: 4734443
End: 4736290
Strand: Reverse
Name: 21244760
Synonym: XAC4044
Alternate gene names: NA
Gene position: 4736290-4734443 (Counterclockwise)
Preceding gene: 21244763
Following gene: 21244758
Centisome position: 91.51
GC content: 65.91
Gene sequence:
>1848_bases TTGTCGGCGCCGCGTGCTCCGCGTACGGTCGCGCATCGCCCTGTTGGAATCTTCTCGATGAAGCCTCTTGTGATTACCGT CGCTCTGGCGCTAGGCACCTGTTTGCCGCTCCAGGCGCAGACCAGCCAAAGCATTGCCAAGGTACCCGCCAGCCCGGCCT GGGTGCAGACCAGCAACGGCTATGCGCAGATCCTGCTCAATGCGCAGGCGCCGTTCCAACCCGAATACGCCAGCTTCTTC GGCGTGCCCGGCTACGACGATCAGGTCGTCGACCTCGGTCCGGACAACGCCGCGCGCTATCGCGATGCCATGCGCAAGGC GCGCGCCACGCTGCAAACGAAGTTGACCACCGAGCGCGATGCCAACGTGCGCCAGGACCTGCAGATCATGATCGGCGCGG CCGAGCAGAACATCGAAGGCAGCGAGCTCAACGAGCGGTATCTGTTGCCCTGGAGCGATGCTCCCGAGGCGGTCTTCAGT GGCCTCAACGGTCTGCTCTCCGACCAAACCGTGCCCGAGCGCCGCGCCAAGGCGCTGGATCGCCTCAAGCGTTACGTCGG CCTGGTACCGGGAAGCACGCCCACCACCACGCTGGCGCGCCAGCGCTACGAGGAGAAGCTGAGCAACAAGGCGTTGCTGC AGCCCACCCAGCGCGAAGTCGAGCAGGCACTGGCCAATGTGGACACGTATGTGGCCGGTATTGGCGAGCTGTTCGCCAAG TACAAGATCGCCGGCGCCGACGAGGCGCTCAAGGCGATGTCCATGCAACTCAAGGACTACGCCGCCTGGACCCGCAGCAC CGTGCTGCCCAAGGCGCGCAAGGACACCCGCCTGCCCGAGCCGCTGTATGCCTTTCAGCTCAAGCAGGTCGGGATCGATA TCGCCCCGCAGCAGTTGATCCAGCGCGCGCAACTGGAGTTCATGGAGACGCGCTCGGCCATGCGCCAACTGGCGCCGCTG GTGGCCAAGGCCAAGGGCGTGCAGGGCGGCGATTATGTGCAGGTGATCCGCGCCCTCAAGGGCAACAAGATCGCCGACGA CCAGTTGGAAACCCACTACCGCGGCGTGATCGATCAGATCGACCCGATCATCCGCCAGCAGCGCATCGTCGATGTGCCCA ACCGCCCGATGCAGATGCGCCTGGGCAGCGCCGCAGAAAGCGCGGCCCAACCGGCCCCGCACTTCCTGCCGGCCCCATTG ATCGGCAATACCGGCCAGCAGGGCCAGTTCGTGTTGCCGCTGGGCAACCCGACCGCCGATGGCGCCAAGAAGGAGCAGTA CGACGACTTCAACTTCGGCTCGGCCGCCTGGACGCTTAGCGCCCACGAAGGCCGCCCTGGCCACGAACTGCAGTTCACCG CCATGGTCGAACGCGGCGTCTCGCTGGCGCGCAGCATGTTCGCCTTCAACTCGGTCAACGTCGAGGGTTGGGCGCTGTAT GCCGAAGCGGAAATGGTGCCGTACGAACCGCTCGACGGCCAGCTCATCGCCCTGCAGTTCCGCCTGTTGCGCGCCGCCCG CGCCATGCTCGACCCGATGCTCAACCTGGGCCTGATCGACCGCGAACGCGCGCGCCAGGTACTGGAAGACGACGTCGGCC TGTCGCCGGCCATGACCCGCCAGGAACTGGACCGCTACACCGTCCGCGCGCCCGGCCAGGCCGGCAGCTACTTCTACGGC TACACCCGCATCCTCGAACTGCGCATGCGCACCGAACTGGCCCTGGGCAAGAAGTTCGACCGCCTGGCCTTCAACAACTT CCTGCTCGACCAGGGACTGCTGCCACCGGACCAGCTGGCCAAGGCGGTGGAGACGCAGTTCATTCCCGCGCAACAAGCCA AGCGCTAA
Upstream 100 bases:
>100_bases CCGCTTAATGCATGAATCGCTTCGCCTGTCTCCTTGCATCGATTCTTTGTGTGCGGCGAGGAAGTGGACTGTGGCAGCAG GCACGATGACCTTCGGCAGG
Downstream 100 bases:
>100_bases CCAGCTCCGGCGGATGCAAAACCACAGGGCGCAATGGAAGGCTGCAAACAGTCATCCATCGCGCCCTGGTGCATTGATGC AGGTGAATCTTGCGGGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MSAPRAPRTVAHRPVGIFSMKPLVITVALALGTCLPLQAQTSQSIAKVPASPAWVQTSNGYAQILLNAQAPFQPEYASFF GVPGYDDQVVDLGPDNAARYRDAMRKARATLQTKLTTERDANVRQDLQIMIGAAEQNIEGSELNERYLLPWSDAPEAVFS GLNGLLSDQTVPERRAKALDRLKRYVGLVPGSTPTTTLARQRYEEKLSNKALLQPTQREVEQALANVDTYVAGIGELFAK YKIAGADEALKAMSMQLKDYAAWTRSTVLPKARKDTRLPEPLYAFQLKQVGIDIAPQQLIQRAQLEFMETRSAMRQLAPL VAKAKGVQGGDYVQVIRALKGNKIADDQLETHYRGVIDQIDPIIRQQRIVDVPNRPMQMRLGSAAESAAQPAPHFLPAPL IGNTGQQGQFVLPLGNPTADGAKKEQYDDFNFGSAAWTLSAHEGRPGHELQFTAMVERGVSLARSMFAFNSVNVEGWALY AEAEMVPYEPLDGQLIALQFRLLRAARAMLDPMLNLGLIDRERARQVLEDDVGLSPAMTRQELDRYTVRAPGQAGSYFYG YTRILELRMRTELALGKKFDRLAFNNFLLDQGLLPPDQLAKAVETQFIPAQQAKR
Sequences:
>Translated_615_residues MSAPRAPRTVAHRPVGIFSMKPLVITVALALGTCLPLQAQTSQSIAKVPASPAWVQTSNGYAQILLNAQAPFQPEYASFF GVPGYDDQVVDLGPDNAARYRDAMRKARATLQTKLTTERDANVRQDLQIMIGAAEQNIEGSELNERYLLPWSDAPEAVFS GLNGLLSDQTVPERRAKALDRLKRYVGLVPGSTPTTTLARQRYEEKLSNKALLQPTQREVEQALANVDTYVAGIGELFAK YKIAGADEALKAMSMQLKDYAAWTRSTVLPKARKDTRLPEPLYAFQLKQVGIDIAPQQLIQRAQLEFMETRSAMRQLAPL VAKAKGVQGGDYVQVIRALKGNKIADDQLETHYRGVIDQIDPIIRQQRIVDVPNRPMQMRLGSAAESAAQPAPHFLPAPL IGNTGQQGQFVLPLGNPTADGAKKEQYDDFNFGSAAWTLSAHEGRPGHELQFTAMVERGVSLARSMFAFNSVNVEGWALY AEAEMVPYEPLDGQLIALQFRLLRAARAMLDPMLNLGLIDRERARQVLEDDVGLSPAMTRQELDRYTVRAPGQAGSYFYG YTRILELRMRTELALGKKFDRLAFNNFLLDQGLLPPDQLAKAVETQFIPAQQAKR >Mature_614_residues SAPRAPRTVAHRPVGIFSMKPLVITVALALGTCLPLQAQTSQSIAKVPASPAWVQTSNGYAQILLNAQAPFQPEYASFFG VPGYDDQVVDLGPDNAARYRDAMRKARATLQTKLTTERDANVRQDLQIMIGAAEQNIEGSELNERYLLPWSDAPEAVFSG LNGLLSDQTVPERRAKALDRLKRYVGLVPGSTPTTTLARQRYEEKLSNKALLQPTQREVEQALANVDTYVAGIGELFAKY KIAGADEALKAMSMQLKDYAAWTRSTVLPKARKDTRLPEPLYAFQLKQVGIDIAPQQLIQRAQLEFMETRSAMRQLAPLV AKAKGVQGGDYVQVIRALKGNKIADDQLETHYRGVIDQIDPIIRQQRIVDVPNRPMQMRLGSAAESAAQPAPHFLPAPLI GNTGQQGQFVLPLGNPTADGAKKEQYDDFNFGSAAWTLSAHEGRPGHELQFTAMVERGVSLARSMFAFNSVNVEGWALYA EAEMVPYEPLDGQLIALQFRLLRAARAMLDPMLNLGLIDRERARQVLEDDVGLSPAMTRQELDRYTVRAPGQAGSYFYGY TRILELRMRTELALGKKFDRLAFNNFLLDQGLLPPDQLAKAVETQFIPAQQAKR
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68103; Mature: 67972
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPRAPRTVAHRPVGIFSMKPLVITVALALGTCLPLQAQTSQSIAKVPASPAWVQTSNG CCCCCCCCHHCCCCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCC YAQILLNAQAPFQPEYASFFGVPGYDDQVVDLGPDNAARYRDAMRKARATLQTKLTTERD EEEEEEECCCCCCCCHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC ANVRQDLQIMIGAAEQNIEGSELNERYLLPWSDAPEAVFSGLNGLLSDQTVPERRAKALD CCHHHHHHHEEECHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH RLKRYVGLVPGSTPTTTLARQRYEEKLSNKALLQPTQREVEQALANVDTYVAGIGELFAK HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YKIAGADEALKAMSMQLKDYAAWTRSTVLPKARKDTRLPEPLYAFQLKQVGIDIAPQQLI HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHCCCCCCHHHHH QRAQLEFMETRSAMRQLAPLVAKAKGVQGGDYVQVIRALKGNKIADDQLETHYRGVIDQI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH DPIIRQQRIVDVPNRPMQMRLGSAAESAAQPAPHFLPAPLIGNTGQQGQFVLPLGNPTAD HHHHHHHHHCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC GAKKEQYDDFNFGSAAWTLSAHEGRPGHELQFTAMVERGVSLARSMFAFNSVNVEGWALY CCCHHCCCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEE AEAEMVPYEPLDGQLIALQFRLLRAARAMLDPMLNLGLIDRERARQVLEDDVGLSPAMTR EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH QELDRYTVRAPGQAGSYFYGYTRILELRMRTELALGKKFDRLAFNNFLLDQGLLPPDQLA HHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHH KAVETQFIPAQQAKR HHHHHHCCCHHHCCC >Mature Secondary Structure SAPRAPRTVAHRPVGIFSMKPLVITVALALGTCLPLQAQTSQSIAKVPASPAWVQTSNG CCCCCCCHHCCCCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCC YAQILLNAQAPFQPEYASFFGVPGYDDQVVDLGPDNAARYRDAMRKARATLQTKLTTERD EEEEEEECCCCCCCCHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC ANVRQDLQIMIGAAEQNIEGSELNERYLLPWSDAPEAVFSGLNGLLSDQTVPERRAKALD CCHHHHHHHEEECHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH RLKRYVGLVPGSTPTTTLARQRYEEKLSNKALLQPTQREVEQALANVDTYVAGIGELFAK HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YKIAGADEALKAMSMQLKDYAAWTRSTVLPKARKDTRLPEPLYAFQLKQVGIDIAPQQLI HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHCCCCCCHHHHH QRAQLEFMETRSAMRQLAPLVAKAKGVQGGDYVQVIRALKGNKIADDQLETHYRGVIDQI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH DPIIRQQRIVDVPNRPMQMRLGSAAESAAQPAPHFLPAPLIGNTGQQGQFVLPLGNPTAD HHHHHHHHHCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC GAKKEQYDDFNFGSAAWTLSAHEGRPGHELQFTAMVERGVSLARSMFAFNSVNVEGWALY CCCHHCCCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEE AEAEMVPYEPLDGQLIALQFRLLRAARAMLDPMLNLGLIDRERARQVLEDDVGLSPAMTR EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH QELDRYTVRAPGQAGSYFYGYTRILELRMRTELALGKKFDRLAFNNFLLDQGLLPPDQLA HHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHH KAVETQFIPAQQAKR HHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA