Click here to switch to the map view.

The map label for this gene is ankB

Identifier: 21244745

GI number: 21244745

Start: 4718551

End: 4719138

Strand: Reverse

Name: ankB

Synonym: XAC4028

Alternate gene names: NA

Gene position: 4719138-4718551 (Counterclockwise)

Preceding gene: 21244746

Following gene: 21244743

Centisome position: 91.18

GC content: 66.16

Gene sequence:

>588_bases
ATGCGCACCCTGTTGTTTCTGATGCTTGGCAGCGTGTCTGCGATTGCCAACGCTGCGTCACCTGCACCCGCATCCGCATC
CGCATCCGCTGCCAGCGCGACGGCCACCGCCACGCCTGAGCAGATCAAGCTGCAGCTGCGCGAGTATTTCTTCGACGCCG
CGCGTGAGGGCCGCCAGGACATGCTGGCCGAGTTCATTCGCTCGCATTACGACCTCAATACCCGCGACGAGAAGGGCTAT
ACCGCCTTGATCCTGGCCGCGTACCACGGTCAGCGGCCAGCGGTGGAGCAGTTGCTGAGCGCCGGCGCCGACCCCTGCGC
GCAGGACAAGCGCGGCAACACCGCACTGATGGGCGCCATCTTCAAGGGCGAGCTGGGGATCGCCAAGCGCTTGATGCAGG
CCGATTGCGCGCCGGACCAGCGCAACAACGCCGGCCAGACCGCTGCGATGTATGCGGCATTGTTCCAACGCACCGACGTG
CTCAAGGACCTCGCCGCCAAGGGAGCGGACCTCAGCCTCAAGGACGGGCAGGGCAACGATGTGACCAAGCTGCAGCGCGG
CGAATTCGCCACCACGCCGGCGCGCTGA

Upstream 100 bases:

>100_bases
TGGCACGGGTCAAGCAGCTGGCCTCCAGCCTGCAGGACTGATCCGCCCCGACGACATCGCGGCTGCGCCGCGATGTCGTC
TTTTTTTTTGGGAGATCCCT

Downstream 100 bases:

>100_bases
GCGCGCCAGTCTTGCCTGCCAGGCCTGCTGCCCACAGCGTGTCGTATCGGCCGCGATGCGCCTATGTGGTTGCGCTTTAC
CTGCTAGAAGCAGCGGGCGG

Product: ankyrin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MRTLLFLMLGSVSAIANAASPAPASASASAASATATATPEQIKLQLREYFFDAAREGRQDMLAEFIRSHYDLNTRDEKGY
TALILAAYHGQRPAVEQLLSAGADPCAQDKRGNTALMGAIFKGELGIAKRLMQADCAPDQRNNAGQTAAMYAALFQRTDV
LKDLAAKGADLSLKDGQGNDVTKLQRGEFATTPAR

Sequences:

>Translated_195_residues
MRTLLFLMLGSVSAIANAASPAPASASASAASATATATPEQIKLQLREYFFDAAREGRQDMLAEFIRSHYDLNTRDEKGY
TALILAAYHGQRPAVEQLLSAGADPCAQDKRGNTALMGAIFKGELGIAKRLMQADCAPDQRNNAGQTAAMYAALFQRTDV
LKDLAAKGADLSLKDGQGNDVTKLQRGEFATTPAR
>Mature_195_residues
MRTLLFLMLGSVSAIANAASPAPASASASAASATATATPEQIKLQLREYFFDAAREGRQDMLAEFIRSHYDLNTRDEKGY
TALILAAYHGQRPAVEQLLSAGADPCAQDKRGNTALMGAIFKGELGIAKRLMQADCAPDQRNNAGQTAAMYAALFQRTDV
LKDLAAKGADLSLKDGQGNDVTKLQRGEFATTPAR

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI89363047, Length=127, Percent_Identity=33.8582677165354, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI225543463, Length=129, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI225543461, Length=129, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 20783; Mature: 20783

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLLFLMLGSVSAIANAASPAPASASASAASATATATPEQIKLQLREYFFDAAREGRQD
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHH
MLAEFIRSHYDLNTRDEKGYTALILAAYHGQRPAVEQLLSAGADPCAQDKRGNTALMGAI
HHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHH
FKGELGIAKRLMQADCAPDQRNNAGQTAAMYAALFQRTDVLKDLAAKGADLSLKDGQGND
HHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
VTKLQRGEFATTPAR
CHHHCCCCCCCCCCC
>Mature Secondary Structure
MRTLLFLMLGSVSAIANAASPAPASASASAASATATATPEQIKLQLREYFFDAAREGRQD
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHH
MLAEFIRSHYDLNTRDEKGYTALILAAYHGQRPAVEQLLSAGADPCAQDKRGNTALMGAI
HHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHH
FKGELGIAKRLMQADCAPDQRNNAGQTAAMYAALFQRTDVLKDLAAKGADLSLKDGQGND
HHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
VTKLQRGEFATTPAR
CHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]