| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244737
Identifier: 21244737
GI number: 21244737
Start: 4710449
End: 4711651
Strand: Reverse
Name: 21244737
Synonym: XAC4020
Alternate gene names: NA
Gene position: 4711651-4710449 (Counterclockwise)
Preceding gene: 21244738
Following gene: 21244735
Centisome position: 91.04
GC content: 64.67
Gene sequence:
>1203_bases ATGCCGCGGGAGTACACCATGCAACGACGTCAATTTCTGCTTGCCTCTGCAGCCGCTGCAAGCATGCCGTGGGCCGGTCG TCTGTTCGCTGCGCCACGCGATAGCGCACGCATGCTGGTGGTGTTTCTGCGTGGCGGCTACGACAGCAATAATCTGCTGG TGCCGCATGGCAGCGATTTTTATTATCAGTCGCGGCCGAGCCTGGCCATTGCGCGGCCGGATCCGGCCAATCCAAACAGT GCTGTAGCGCTGAACGCGCAGTGGGGTCTCAACCCGGTGATGCGCGAGACGCTGCTGCCACTATGGGAACGCAAGCAAGT GGCCTTCGTGCCGTTTGCCGGCACCGACGACCTGTCGCGCAGTCACTTCGAAACCCAGGACGATATCGAATCCGGCCAGG CCGGCAAGCACCGCGATTACCGCTCCGGGTTCATGGCGCGCCTGTCGGGGGTGCTCAGTGGCGTGCCGGCCATCGCGTTC ACCGATTCGTTGCCGCTGACGTTCCAGGGTGGTGGCGATTTACCCAATGTGTCGTTGCGGAGTATCGGCAAAGGCGGGCT GGATGCGCGGCAGGCACAGATCCTGTCGCAGATGTACGACAGTACGCCGCTGGCGGCCGCTGCGCGCGAGGGCTTGGCGC TGCGTCAGCAGGTCACCGCGCAGTTGCGCGAAGAGATGGAGCAGGCCGGCCGTGGCGCCGCCAGTGCACGCACCTTCGCC GATGAAACCCGGCGCATGGCCACCTTGATGCGCGAGCGCTATCGCCTGGGCTTCGTCGATGTCGGTGGCTGGGACACGCA TGCCAACCAGGGTAGCGTGGAAGGTGGCCTGGCCAACAACCTGCGCAATCTCGGCGAAGGGCTGGCTGCCTATGCCGATG CGTTGGGCCCGGCCTGGAACGACACCGTGGTGGTCGTCATCTCCGAATTCGGCCGCACCTTCCGCGAGAACGGCAGCAAG GGCACCGATCACGGGCACGGCACCACGTACTGGGTGCTGGGAGGTGGCTTGCGCGGCGGTCGCATCGCTGGCGAACAGCT GGCGGTCGAACAGGCGCAGCTGCTGCAGAATCGCGATTACCCAGTGCTCAACAATTACCGCAGCCTGTTCAGCGGGATGC TCAGCCGTCTGTGGGGGCTGTCGCCAGCGCAGTTGGATCGGGTGTTCCCGGGTGCCAAGCCACGCGATCTTGGATTGGTG TGA
Upstream 100 bases:
>100_bases GGGCATGGCGCCGATTCGGATTCGCCGATTCAAGGCCCACGATTCACGTTCGCAGAATAAAAACAACCGATCCAGCGATT TAATCAATGCCAGGCGGTCA
Downstream 100 bases:
>100_bases ATCTGCTTGGTGAACGATCGCACAGGCGAGGCCATGTGCGTGATGTCGACCGCGGGTTTGCGTCGATCCTGCGGCATCTG CTTCAAGCGACGGCTGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MPREYTMQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHGSDFYYQSRPSLAIARPDPANPNS AVALNAQWGLNPVMRETLLPLWERKQVAFVPFAGTDDLSRSHFETQDDIESGQAGKHRDYRSGFMARLSGVLSGVPAIAF TDSLPLTFQGGGDLPNVSLRSIGKGGLDARQAQILSQMYDSTPLAAAAREGLALRQQVTAQLREEMEQAGRGAASARTFA DETRRMATLMRERYRLGFVDVGGWDTHANQGSVEGGLANNLRNLGEGLAAYADALGPAWNDTVVVVISEFGRTFRENGSK GTDHGHGTTYWVLGGGLRGGRIAGEQLAVEQAQLLQNRDYPVLNNYRSLFSGMLSRLWGLSPAQLDRVFPGAKPRDLGLV
Sequences:
>Translated_400_residues MPREYTMQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHGSDFYYQSRPSLAIARPDPANPNS AVALNAQWGLNPVMRETLLPLWERKQVAFVPFAGTDDLSRSHFETQDDIESGQAGKHRDYRSGFMARLSGVLSGVPAIAF TDSLPLTFQGGGDLPNVSLRSIGKGGLDARQAQILSQMYDSTPLAAAAREGLALRQQVTAQLREEMEQAGRGAASARTFA DETRRMATLMRERYRLGFVDVGGWDTHANQGSVEGGLANNLRNLGEGLAAYADALGPAWNDTVVVVISEFGRTFRENGSK GTDHGHGTTYWVLGGGLRGGRIAGEQLAVEQAQLLQNRDYPVLNNYRSLFSGMLSRLWGLSPAQLDRVFPGAKPRDLGLV >Mature_399_residues PREYTMQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHGSDFYYQSRPSLAIARPDPANPNSA VALNAQWGLNPVMRETLLPLWERKQVAFVPFAGTDDLSRSHFETQDDIESGQAGKHRDYRSGFMARLSGVLSGVPAIAFT DSLPLTFQGGGDLPNVSLRSIGKGGLDARQAQILSQMYDSTPLAAAAREGLALRQQVTAQLREEMEQAGRGAASARTFAD ETRRMATLMRERYRLGFVDVGGWDTHANQGSVEGGLANNLRNLGEGLAAYADALGPAWNDTVVVVISEFGRTFRENGSKG TDHGHGTTYWVLGGGLRGGRIAGEQLAVEQAQLLQNRDYPVLNNYRSLFSGMLSRLWGLSPAQLDRVFPGAKPRDLGLV
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43542; Mature: 43410
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPREYTMQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHGSDF CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEEECCCCCCCEEECCCCCC YYQSRPSLAIARPDPANPNSAVALNAQWGLNPVMRETLLPLWERKQVAFVPFAGTDDLSR EECCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCH SHFETQDDIESGQAGKHRDYRSGFMARLSGVLSGVPAIAFTDSLPLTFQGGGDLPNVSLR HCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCCCHHH SIGKGGLDARQAQILSQMYDSTPLAAAAREGLALRQQVTAQLREEMEQAGRGAASARTFA HCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DETRRMATLMRERYRLGFVDVGGWDTHANQGSVEGGLANNLRNLGEGLAAYADALGPAWN HHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC DTVVVVISEFGRTFRENGSKGTDHGHGTTYWVLGGGLRGGRIAGEQLAVEQAQLLQNRDY CEEEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC PVLNNYRSLFSGMLSRLWGLSPAQLDRVFPGAKPRDLGLV CHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PREYTMQRRQFLLASAAAASMPWAGRLFAAPRDSARMLVVFLRGGYDSNNLLVPHGSDF CCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEEECCCCCCCEEECCCCCC YYQSRPSLAIARPDPANPNSAVALNAQWGLNPVMRETLLPLWERKQVAFVPFAGTDDLSR EECCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCH SHFETQDDIESGQAGKHRDYRSGFMARLSGVLSGVPAIAFTDSLPLTFQGGGDLPNVSLR HCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCCCHHH SIGKGGLDARQAQILSQMYDSTPLAAAAREGLALRQQVTAQLREEMEQAGRGAASARTFA HCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DETRRMATLMRERYRLGFVDVGGWDTHANQGSVEGGLANNLRNLGEGLAAYADALGPAWN HHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC DTVVVVISEFGRTFRENGSKGTDHGHGTTYWVLGGGLRGGRIAGEQLAVEQAQLLQNRDY CEEEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC PVLNNYRSLFSGMLSRLWGLSPAQLDRVFPGAKPRDLGLV CHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA