| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244710
Identifier: 21244710
GI number: 21244710
Start: 4683542
End: 4684384
Strand: Reverse
Name: 21244710
Synonym: XAC3992
Alternate gene names: NA
Gene position: 4684384-4683542 (Counterclockwise)
Preceding gene: 21244711
Following gene: 21244707
Centisome position: 90.51
GC content: 60.85
Gene sequence:
>843_bases ATGCCAGCCGCGCGCAGGTACACTGCACAGCATCGAAAACACGGCGAGCGATGCATGAAATGTCTGTGGCTGTCGGGCCT GCTGCTGGTGTGCGCCTTCAACGCATCCGCCGAGCAATACAAGATATTGGTGGCTGCCATTCCCAACCAGTATCACCACG ACTATATCCCCGTGGCCAAGCCGCAATTCGAAGCGATGGCGCGCAAACATTATGTCGAGATGGTATGGGCGTGGAACGCC AAGGCGTTCGATGGCGACCTGTCGCAATACGCGGCCATCGTATTGCTCAATACGCCGGCCACCGATCTGGACCCGACGCA GCGGGCCAACTTTCAAAAATACGTGCGTAACGGCGGCGGCGTGGTCGCGGTGCACAAGGCCTTTGCGATCAAACGCGGGG ACTGGGAGTGGTACGACCACATGATCGGCCGCTCGTTCCGCACGCACCCTTACATGCAAACGGCGATGGTGGATGTGGCC GACGCCAATTTCCCGGCCACTGCCGGCCTGCCCAAGCGCTGGGTGTGGAGCGACGAATGGTACGAATACGATCCGCCCTA CGGCGACGATCTGGTCACGCTGCTCACCGTCGACGAACGCAGTTACGACCCCACCCTGATCTGGCCGGGCCAGGTCGCCA AGGGCATGGGCAAACAGCACCCGGTGGCGTGGTACCACCATTTCGAAGGTGGCCGCGTCTTCGCCACTGCACTAGGCCAT CTGGCCGAAGCCTATAACGACCCACGCTACCTGGAGCATTTGTACGGTGGGATCTATTGGGCCGCCACCGGCAAGGGCAT CGAATCATCTGCGCCAGCGGCCAAAACAAAACGCCAGCACTAG
Upstream 100 bases:
>100_bases TCGCAGAAGCGATGCGATCGCACCAGGCTGCAGCCACTGAAGCGGTGGCATCCGTTACATCGGCAAGCGATCCACAGCGA TTCCAAATGCCGGCCAAAGC
Downstream 100 bases:
>100_bases CCCTCCCCCTCGGGAGAGGGGTGAGGGTATGAGGCAAAGCCACTCCAGACGGCAGTTAACCCGATGTTTCGTCCGCACCC TCATCCGCCCCTGCGGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Glycosyl Hydrolase; PKD Domain Containing Protein; Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Sigma-70 Factor; Cytochrome C Class I; Crp/Fnr Family Transcriptional Regulator; Glucose/Sorbosone Dehydrogenase; LOW QUALITY PROTEIN Sigma-70 Factor; LPXTG-Motif Cell Wall Anchor Domain Protein; FG-GAP Repeat Protein; Pkd Domain Containing Protein; Class I Glutamine Amidotransferase-Like Protein; Secreted Protein
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MPAARRYTAQHRKHGERCMKCLWLSGLLLVCAFNASAEQYKILVAAIPNQYHHDYIPVAKPQFEAMARKHYVEMVWAWNA KAFDGDLSQYAAIVLLNTPATDLDPTQRANFQKYVRNGGGVVAVHKAFAIKRGDWEWYDHMIGRSFRTHPYMQTAMVDVA DANFPATAGLPKRWVWSDEWYEYDPPYGDDLVTLLTVDERSYDPTLIWPGQVAKGMGKQHPVAWYHHFEGGRVFATALGH LAEAYNDPRYLEHLYGGIYWAATGKGIESSAPAAKTKRQH
Sequences:
>Translated_280_residues MPAARRYTAQHRKHGERCMKCLWLSGLLLVCAFNASAEQYKILVAAIPNQYHHDYIPVAKPQFEAMARKHYVEMVWAWNA KAFDGDLSQYAAIVLLNTPATDLDPTQRANFQKYVRNGGGVVAVHKAFAIKRGDWEWYDHMIGRSFRTHPYMQTAMVDVA DANFPATAGLPKRWVWSDEWYEYDPPYGDDLVTLLTVDERSYDPTLIWPGQVAKGMGKQHPVAWYHHFEGGRVFATALGH LAEAYNDPRYLEHLYGGIYWAATGKGIESSAPAAKTKRQH >Mature_279_residues PAARRYTAQHRKHGERCMKCLWLSGLLLVCAFNASAEQYKILVAAIPNQYHHDYIPVAKPQFEAMARKHYVEMVWAWNAK AFDGDLSQYAAIVLLNTPATDLDPTQRANFQKYVRNGGGVVAVHKAFAIKRGDWEWYDHMIGRSFRTHPYMQTAMVDVAD ANFPATAGLPKRWVWSDEWYEYDPPYGDDLVTLLTVDERSYDPTLIWPGQVAKGMGKQHPVAWYHHFEGGRVFATALGHL AEAYNDPRYLEHLYGGIYWAATGKGIESSAPAAKTKRQH
Specific function: Unknown
COG id: COG3828
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31874; Mature: 31743
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAARRYTAQHRKHGERCMKCLWLSGLLLVCAFNASAEQYKILVAAIPNQYHHDYIPVAK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCC PQFEAMARKHYVEMVWAWNAKAFDGDLSQYAAIVLLNTPATDLDPTQRANFQKYVRNGGG HHHHHHHHHHHEEEEEEECCCCCCCCHHHEEEEEEEECCCCCCCCHHHHHHHHHHHCCCC VVAVHKAFAIKRGDWEWYDHMIGRSFRTHPYMQTAMVDVADANFPATAGLPKRWVWSDEW EEEEEEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCC YEYDPPYGDDLVTLLTVDERSYDPTLIWPGQVAKGMGKQHPVAWYHHFEGGRVFATALGH EECCCCCCCCEEEEEEECCCCCCCEEEECHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH LAEAYNDPRYLEHLYGGIYWAATGKGIESSAPAAKTKRQH HHHHHCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAARRYTAQHRKHGERCMKCLWLSGLLLVCAFNASAEQYKILVAAIPNQYHHDYIPVAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCC PQFEAMARKHYVEMVWAWNAKAFDGDLSQYAAIVLLNTPATDLDPTQRANFQKYVRNGGG HHHHHHHHHHHEEEEEEECCCCCCCCHHHEEEEEEEECCCCCCCCHHHHHHHHHHHCCCC VVAVHKAFAIKRGDWEWYDHMIGRSFRTHPYMQTAMVDVADANFPATAGLPKRWVWSDEW EEEEEEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCC YEYDPPYGDDLVTLLTVDERSYDPTLIWPGQVAKGMGKQHPVAWYHHFEGGRVFATALGH EECCCCCCCCEEEEEEECCCCCCCEEEECHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH LAEAYNDPRYLEHLYGGIYWAATGKGIESSAPAAKTKRQH HHHHHCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA