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The map label for this gene is prtR

Identifier: 21244706

GI number: 21244706

Start: 4680188

End: 4680940

Strand: Reverse

Name: prtR

Synonym: XAC3988

Alternate gene names: NA

Gene position: 4680940-4680188 (Counterclockwise)

Preceding gene: 21244707

Following gene: 21244702

Centisome position: 90.44

GC content: 67.2

Gene sequence:

>753_bases
ATGACCGCCATACCGCCCGACGAACACGCGCTGCACGCATACGTCGATGGCCGCCTGGCGCCGGAGCAACATGCAGCAGT
GGCAGCCTGGCTACAGGCGCATCCCGCTCACGCTGCACGCGTAGCCGGCTGGAAGCGCGATGCCGAAGCGCTGCGTGCCG
CACACGCCGGCCTGATGCCGGAGATGAGCGCTGTTGCATTCACGCCTGCGACGATTCGCCGTGGCCTGCAACAGCGCCGT
CGTGCCGTGTTTGCCGTGGCCGCCAGTTGCGTGCTGGCACTTGGCCTGGGTACCGGGTTGGGTTGGCAGCTGCATGCGAG
CCGGATCGCCAGCCAACGCGTGCCGATGGCCGATGCAGTGGCCGCGTACCGCCTGTTCGCCGATGCCGACGCGCATCAGG
GCATTGCGTTGGACGTGCAGCGCCGCGCCGAACTGGAACCGTGGTTGCGCACGCATTTCGGCAACGCAGGCGTCGTGCCG
GATCTGCGTGCGCAGGGTTATACGTTACGCGGTGGGCAACTGCTTTCCACATCGGAAGGCGCGGCCGCGATGCTGGTATA
TAGCGATGCCGGCGGCGCACGCATCGGTCTGTATCTGCGTCCACGCAGCGGACCGATGCCGACCGGCGAGCGCCGCGATG
GTCGGCTGTTGGCGCAGTACTGGGCAGAAGGCGACACCGCATTTGCATTGGTCGGCCCGGAAACGCAGACACGCATGCGC
ACGATCGCGCCGTTGTTGCGTCGCCAGGGATGA

Upstream 100 bases:

>100_bases
CGATCGGCACCGTGATGTCGCGCCTGTCGCGTGCGCGCGAACGCCTGCGTGCCGTGAACGAAGGCCAGGTGAAACACGCA
CCTGCATTGAGGATCCTGAA

Downstream 100 bases:

>100_bases
CCAGCGCAGCTGAAGGCGAGTTGTGCTCGCCTCAGACTGACAGCAGCGCTCGCCGCGCTCAACCGCCGTAGCGTTGCTGC
AGCATCGCGAACGCCGAGCG

Product: transmembrane regulator protein PrtR

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Transmembrane Regulator PrtR; Anti-Sigma Factor; Transmembrane Regulator; Transmembrane Protein; Transmembrane Activator Of PrtI; Transmembrane Transcription Activator Of PrtI; Transmembrane Regulatory Protein; Transmembrane Regulator Protein PrtR

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTAIPPDEHALHAYVDGRLAPEQHAAVAAWLQAHPAHAARVAGWKRDAEALRAAHAGLMPEMSAVAFTPATIRRGLQQRR
RAVFAVAASCVLALGLGTGLGWQLHASRIASQRVPMADAVAAYRLFADADAHQGIALDVQRRAELEPWLRTHFGNAGVVP
DLRAQGYTLRGGQLLSTSEGAAAMLVYSDAGGARIGLYLRPRSGPMPTGERRDGRLLAQYWAEGDTAFALVGPETQTRMR
TIAPLLRRQG

Sequences:

>Translated_250_residues
MTAIPPDEHALHAYVDGRLAPEQHAAVAAWLQAHPAHAARVAGWKRDAEALRAAHAGLMPEMSAVAFTPATIRRGLQQRR
RAVFAVAASCVLALGLGTGLGWQLHASRIASQRVPMADAVAAYRLFADADAHQGIALDVQRRAELEPWLRTHFGNAGVVP
DLRAQGYTLRGGQLLSTSEGAAAMLVYSDAGGARIGLYLRPRSGPMPTGERRDGRLLAQYWAEGDTAFALVGPETQTRMR
TIAPLLRRQG
>Mature_249_residues
TAIPPDEHALHAYVDGRLAPEQHAAVAAWLQAHPAHAARVAGWKRDAEALRAAHAGLMPEMSAVAFTPATIRRGLQQRRR
AVFAVAASCVLALGLGTGLGWQLHASRIASQRVPMADAVAAYRLFADADAHQGIALDVQRRAELEPWLRTHFGNAGVVPD
LRAQGYTLRGGQLLSTSEGAAAMLVYSDAGGARIGLYLRPRSGPMPTGERRDGRLLAQYWAEGDTAFALVGPETQTRMRT
IAPLLRRQG

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26846; Mature: 26715

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIPPDEHALHAYVDGRLAPEQHAAVAAWLQAHPAHAARVAGWKRDAEALRAAHAGLMP
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCC
EMSAVAFTPATIRRGLQQRRRAVFAVAASCVLALGLGTGLGWQLHASRIASQRVPMADAV
CCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
AAYRLFADADAHQGIALDVQRRAELEPWLRTHFGNAGVVPDLRAQGYTLRGGQLLSTSEG
HHHHHHHCCCCCCCEEEEHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEECCCEEEECCCC
AAAMLVYSDAGGARIGLYLRPRSGPMPTGERRDGRLLAQYWAEGDTAFALVGPETQTRMR
CEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCHHHHHH
TIAPLLRRQG
HHHHHHHCCC
>Mature Secondary Structure 
TAIPPDEHALHAYVDGRLAPEQHAAVAAWLQAHPAHAARVAGWKRDAEALRAAHAGLMP
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCC
EMSAVAFTPATIRRGLQQRRRAVFAVAASCVLALGLGTGLGWQLHASRIASQRVPMADAV
CCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
AAYRLFADADAHQGIALDVQRRAELEPWLRTHFGNAGVVPDLRAQGYTLRGGQLLSTSEG
HHHHHHHCCCCCCCEEEEHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEECCCEEEECCCC
AAAMLVYSDAGGARIGLYLRPRSGPMPTGERRDGRLLAQYWAEGDTAFALVGPETQTRMR
CEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCHHHHHH
TIAPLLRRQG
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA