| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244659
Identifier: 21244659
GI number: 21244659
Start: 4632933
End: 4634114
Strand: Direct
Name: 21244659
Synonym: XAC3940
Alternate gene names: NA
Gene position: 4632933-4634114 (Clockwise)
Preceding gene: 21244658
Following gene: 21244668
Centisome position: 89.52
GC content: 60.74
Gene sequence:
>1182_bases GTGGCAAAAGCGAAGGAACAGGCAAGCAGGCCGGATGCGCACTTGGAAGCGATCGTGTTGCAAGCCCAAGCAATCACGGA GGCTTGGGCCAAACGGCACGAGTTTTGGGAGGACTCCACTCACAAGAATCCCTTGGCGCACTACGACACGGAACCTGGGG AAGGCGTATCGATCCTGACGCTGTGCTCTGATGGCATGCCGGCACGATGCCTCAACGAGGGAACCCGAGAGGCCGATGAG CTAGGGGAAGAGTTGGCCCAGATAGGTCTCTACCTCGAGCTGGACGATGCAGTCACTGCCAACTACTACCTCATTGACCA CGAGTCAGCGCTGCAGAAGCAGTTCGATCAATGGGCACAATGGCAGTGGACTTGCCGCCTGATCGAAGCAGACACGGCAG ACGTCTCGGGGGACATCTACCGACACTTTGCGGAACACCCGGAAGATCTTTACCGGCTTCCTCACCGCGACTTCGAAGTA CTGATCAGCAGCGTATTCACTGCACGGGGTTGGAAAACACAGATCGGCCCCGGCACGGCAGATGAAGGCGTGGATGTCCG GATGTGGCTTCAGTCTCCGCTGGGCGATGCACTGACCTTGGTCCAAGCCCGGCGATACGCAAAGCACCGGCTGATTGGCT TGGAGGCCGTGGCCGCATTGGAGGCGCACAGCCTGCGTGAAGAGGCGTCTGGGCTGTTTGTAACGACCTCCCGCTATCGG CAAGTGGCCCAGCGCTTTGCCAGTCGAAACAAGAAGCTCTTGCTGGCAGATTCGTCGGACGTCGCGACCTGGTGCCACGA GGCGTCTGTTACTGTGCAGAGCGCGAAGGCAAAGGCACTGGCCCTTGAGTCGGTTGATCGCCTGCTGGCCGAGGTAAGGG CGGCGGGCACGCACCCGGCCCTGGTGTACTGCCTCAAGCGCTATCCGTCCTTCTGTCTGGTGCTGCGGGAGACTCCGACC GGTGCGCTGCTTATGCCCATTCCAACTGAAGCGACGTCGAGCGACGGGCAGGCCGGATACGTGTTGCCCGTGTTGGATGG GCGCCTGAACTACCAAACGCCAGACCAGGGGGTGTTCCGCGCCATTCGCACGGAGCGAGATGGCGACGTGAGCTACTGGG GAGGGGGAGATCTATACAGTCCTTGGGGAGGGGAAGCCTTGGGCTTCGACTTCTGGGACTGA
Upstream 100 bases:
>100_bases GCAAAGAGCATGCCCGAATCGAGCCCACCGGCCAGCCGTCGGCGGGTGGCGCCGCGGATTCCTCGATGGCAGCATTTGAC TGTCGACAGGGAGGGTGAGC
Downstream 100 bases:
>100_bases TGGCGTGGGCGCCATCGTTAGTCGATGCAGTGCCGCCGGTCTTAGCCGCATGAAGCCTTAAGGCGGCCTTGATATTAAGG CTCGAAGAAGCGTCGGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Mrr Restriction System Protein
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MAKAKEQASRPDAHLEAIVLQAQAITEAWAKRHEFWEDSTHKNPLAHYDTEPGEGVSILTLCSDGMPARCLNEGTREADE LGEELAQIGLYLELDDAVTANYYLIDHESALQKQFDQWAQWQWTCRLIEADTADVSGDIYRHFAEHPEDLYRLPHRDFEV LISSVFTARGWKTQIGPGTADEGVDVRMWLQSPLGDALTLVQARRYAKHRLIGLEAVAALEAHSLREEASGLFVTTSRYR QVAQRFASRNKKLLLADSSDVATWCHEASVTVQSAKAKALALESVDRLLAEVRAAGTHPALVYCLKRYPSFCLVLRETPT GALLMPIPTEATSSDGQAGYVLPVLDGRLNYQTPDQGVFRAIRTERDGDVSYWGGGDLYSPWGGEALGFDFWD
Sequences:
>Translated_393_residues MAKAKEQASRPDAHLEAIVLQAQAITEAWAKRHEFWEDSTHKNPLAHYDTEPGEGVSILTLCSDGMPARCLNEGTREADE LGEELAQIGLYLELDDAVTANYYLIDHESALQKQFDQWAQWQWTCRLIEADTADVSGDIYRHFAEHPEDLYRLPHRDFEV LISSVFTARGWKTQIGPGTADEGVDVRMWLQSPLGDALTLVQARRYAKHRLIGLEAVAALEAHSLREEASGLFVTTSRYR QVAQRFASRNKKLLLADSSDVATWCHEASVTVQSAKAKALALESVDRLLAEVRAAGTHPALVYCLKRYPSFCLVLRETPT GALLMPIPTEATSSDGQAGYVLPVLDGRLNYQTPDQGVFRAIRTERDGDVSYWGGGDLYSPWGGEALGFDFWD >Mature_392_residues AKAKEQASRPDAHLEAIVLQAQAITEAWAKRHEFWEDSTHKNPLAHYDTEPGEGVSILTLCSDGMPARCLNEGTREADEL GEELAQIGLYLELDDAVTANYYLIDHESALQKQFDQWAQWQWTCRLIEADTADVSGDIYRHFAEHPEDLYRLPHRDFEVL ISSVFTARGWKTQIGPGTADEGVDVRMWLQSPLGDALTLVQARRYAKHRLIGLEAVAALEAHSLREEASGLFVTTSRYRQ VAQRFASRNKKLLLADSSDVATWCHEASVTVQSAKAKALALESVDRLLAEVRAAGTHPALVYCLKRYPSFCLVLRETPTG ALLMPIPTEATSSDGQAGYVLPVLDGRLNYQTPDQGVFRAIRTERDGDVSYWGGGDLYSPWGGEALGFDFWD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43782; Mature: 43651
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAKEQASRPDAHLEAIVLQAQAITEAWAKRHEFWEDSTHKNPLAHYDTEPGEGVSILT CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE LCSDGMPARCLNEGTREADELGEELAQIGLYLELDDAVTANYYLIDHESALQKQFDQWAQ EECCCCCHHHHHHCCHHHHHHHHHHHHHCCEEEECCCEEEEEEEEECHHHHHHHHHHHHC WQWTCRLIEADTADVSGDIYRHFAEHPEDLYRLPHRDFEVLISSVFTARGWKTQIGPGTA EEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCEECCCCCCC DEGVDVRMWLQSPLGDALTLVQARRYAKHRLIGLEAVAALEAHSLREEASGLFVTTSRYR CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHH QVAQRFASRNKKLLLADSSDVATWCHEASVTVQSAKAKALALESVDRLLAEVRAAGTHPA HHHHHHHCCCCEEEEECCCCHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHH LVYCLKRYPSFCLVLRETPTGALLMPIPTEATSSDGQAGYVLPVLDGRLNYQTPDQGVFR HHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHH AIRTERDGDVSYWGGGDLYSPWGGEALGFDFWD HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AKAKEQASRPDAHLEAIVLQAQAITEAWAKRHEFWEDSTHKNPLAHYDTEPGEGVSILT CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE LCSDGMPARCLNEGTREADELGEELAQIGLYLELDDAVTANYYLIDHESALQKQFDQWAQ EECCCCCHHHHHHCCHHHHHHHHHHHHHCCEEEECCCEEEEEEEEECHHHHHHHHHHHHC WQWTCRLIEADTADVSGDIYRHFAEHPEDLYRLPHRDFEVLISSVFTARGWKTQIGPGTA EEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCEECCCCCCC DEGVDVRMWLQSPLGDALTLVQARRYAKHRLIGLEAVAALEAHSLREEASGLFVTTSRYR CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHH QVAQRFASRNKKLLLADSSDVATWCHEASVTVQSAKAKALALESVDRLLAEVRAAGTHPA HHHHHHHCCCCEEEEECCCCHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHH LVYCLKRYPSFCLVLRETPTGALLMPIPTEATSSDGQAGYVLPVLDGRLNYQTPDQGVFR HHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHH AIRTERDGDVSYWGGGDLYSPWGGEALGFDFWD HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA