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The map label for this gene is 21244655

Identifier: 21244655

GI number: 21244655

Start: 4630220

End: 4630882

Strand: Direct

Name: 21244655

Synonym: XAC3936

Alternate gene names: NA

Gene position: 4630220-4630882 (Clockwise)

Preceding gene: 21244654

Following gene: 21244656

Centisome position: 89.46

GC content: 62.75

Gene sequence:

>663_bases
GTGGAGCAGTTGTATCGCGAGCAGCAGCTACAAGTCCGGCGCCGCAAGCGCAAGAAGGTACCGGTTGGCGAGCGTCAGCC
GCTGCTGCGGCCAGCGCAGGCCAGCCAGGTGTGGTCGATGGACTTCGTGTTCGACCGCTCCGCCGAAGGGCGAGTGATCA
TGTGTCTGGTGATCGTGGACGACGCAACGCACGAAGCGGTCGCCATCGACGTGGAGCGAGCCATCTCCGGCCATGGCGTG
ACCCGCGTGCTGGACCGGCTGGTACACAGTCGCGGCTTGCCGCAGGTGATCCGTACCGACAACGGCAAGGAGTTTTGCGG
AAAAGCAATGGTCGCTTGGGCGCATGCCCGTGGCGTGCAGTTACGGCTTATCCAACCCGGCAAGCCGAACCAGAACGCCT
ACGTCGAATCCTTCAACGGCCGGCCACGCGACGAATGCCTCAACGAGCACTGGTTCCCGACGTTGCTGCACGCGCGCACC
GAGATCGAACGCTGGCGACGCGGATACAAACGAGGACCGACCCAAGAAAGCAATTGGCGGGATGACGCCAGCTGCCTACG
CCCAACATCTTGCCAACACCGATATCATCAACCCCGGACTCTAAACCCAACCGCTACTCAGGGCGGGGGGACGTCAGTTC
TTTTTCCCCGCATGCGCTGCTGA

Upstream 100 bases:

>100_bases
CGAGCGCATTCTTGCGTTGGCGCATCGCCATCGCCGCTACGGCGTGGGGATGATCTATCTCAAACTGCGACAGGAAGGAC
GCCTGGTGAACTAGAAGAGC

Downstream 100 bases:

>100_bases
CGGAGCGGAGCCTGCGGTGACACCGATTCGGCCTGCGTCATTTGAGCCGCCTGCGTTGAGTGCAAAGAGGCGGTATGCCA
AGACAGTTGCCATAACAACT

Product: IS1389 transposase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MEQLYREQQLQVRRRKRKKVPVGERQPLLRPAQASQVWSMDFVFDRSAEGRVIMCLVIVDDATHEAVAIDVERAISGHGV
TRVLDRLVHSRGLPQVIRTDNGKEFCGKAMVAWAHARGVQLRLIQPGKPNQNAYVESFNGRPRDECLNEHWFPTLLHART
EIERWRRGYKRGPTQESNWRDDASCLRPTSCQHRYHQPRTLNPTATQGGGTSVLFPRMRC

Sequences:

>Translated_220_residues
MEQLYREQQLQVRRRKRKKVPVGERQPLLRPAQASQVWSMDFVFDRSAEGRVIMCLVIVDDATHEAVAIDVERAISGHGV
TRVLDRLVHSRGLPQVIRTDNGKEFCGKAMVAWAHARGVQLRLIQPGKPNQNAYVESFNGRPRDECLNEHWFPTLLHART
EIERWRRGYKRGPTQESNWRDDASCLRPTSCQHRYHQPRTLNPTATQGGGTSVLFPRMRC
>Mature_220_residues
MEQLYREQQLQVRRRKRKKVPVGERQPLLRPAQASQVWSMDFVFDRSAEGRVIMCLVIVDDATHEAVAIDVERAISGHGV
TRVLDRLVHSRGLPQVIRTDNGKEFCGKAMVAWAHARGVQLRLIQPGKPNQNAYVESFNGRPRDECLNEHWFPTLLHART
EIERWRRGYKRGPTQESNWRDDASCLRPTSCQHRYHQPRTLNPTATQGGGTSVLFPRMRC

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 25388; Mature: 25388

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLYREQQLQVRRRKRKKVPVGERQPLLRPAQASQVWSMDFVFDRSAEGRVIMCLVIVD
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEHEEECCCCCCCEEEEEEEEC
DATHEAVAIDVERAISGHGVTRVLDRLVHSRGLPQVIRTDNGKEFCGKAMVAWAHARGVQ
CCCCCEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCE
LRLIQPGKPNQNAYVESFNGRPRDECLNEHWFPTLLHARTEIERWRRGYKRGPTQESNWR
EEEECCCCCCCCCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DDASCLRPTSCQHRYHQPRTLNPTATQGGGTSVLFPRMRC
CCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MEQLYREQQLQVRRRKRKKVPVGERQPLLRPAQASQVWSMDFVFDRSAEGRVIMCLVIVD
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEHEEECCCCCCCEEEEEEEEC
DATHEAVAIDVERAISGHGVTRVLDRLVHSRGLPQVIRTDNGKEFCGKAMVAWAHARGVQ
CCCCCEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCE
LRLIQPGKPNQNAYVESFNGRPRDECLNEHWFPTLLHARTEIERWRRGYKRGPTQESNWR
EEEECCCCCCCCCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DDASCLRPTSCQHRYHQPRTLNPTATQGGGTSVLFPRMRC
CCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]