Click here to switch to the map view.

The map label for this gene is 21244654

Identifier: 21244654

GI number: 21244654

Start: 4629977

End: 4630213

Strand: Direct

Name: 21244654

Synonym: XAC3935

Alternate gene names: NA

Gene position: 4629977-4630213 (Clockwise)

Preceding gene: 21244653

Following gene: 21244655

Centisome position: 89.46

GC content: 66.24

Gene sequence:

>237_bases
GTGGTGAGCGCACCGGCGCGTCGTGCGCTGGTGTGCGAGTGGATCGGGCGTGGTGCCAGCGAGCGTCGTGCCTTGGCGGC
GATCGGCATGAGCGCCAGCGCGCTGCGCTATTGCCCACGCCAAGACCGCAATGGCGAACTGCGCGAGCGCATTCTTGCGT
TGGCGCATCGCCATCGCCGCTACGGCGTGGGGATGATCTATCTCAAACTGCGACAGGAAGGACGCCTGGTGAACTAG

Upstream 100 bases:

>100_bases
TGAGCCGTATACGACCTGGGCGAGAGTTTTCACTTTGATCCTCAAGCTTGCAGTTTAAATGTACCTGGCTCTTGCGATAT
CAAGGATGCGTTGCGAAAAA

Downstream 100 bases:

>100_bases
AAGAGCGTGGAGCAGTTGTATCGCGAGCAGCAGCTACAAGTCCGGCGCCGCAAGCGCAAGAAGGTACCGGTTGGCGAGCG
TCAGCCGCTGCTGCGGCCAG

Product: IS1389 transposase

Products: NA

Alternate protein names: ISXoo3 Transposase ORF A; ISXoo3 Transposase OrfB; Pseudogene

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MVSAPARRALVCEWIGRGASERRALAAIGMSASALRYCPRQDRNGELRERILALAHRHRRYGVGMIYLKLRQEGRLVN

Sequences:

>Translated_78_residues
MVSAPARRALVCEWIGRGASERRALAAIGMSASALRYCPRQDRNGELRERILALAHRHRRYGVGMIYLKLRQEGRLVN
>Mature_78_residues
MVSAPARRALVCEWIGRGASERRALAAIGMSASALRYCPRQDRNGELRERILALAHRHRRYGVGMIYLKLRQEGRLVN

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8876; Mature: 8876

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAPARRALVCEWIGRGASERRALAAIGMSASALRYCPRQDRNGELRERILALAHRHRR
CCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
YGVGMIYLKLRQEGRLVN
CCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MVSAPARRALVCEWIGRGASERRALAAIGMSASALRYCPRQDRNGELRERILALAHRHRR
CCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
YGVGMIYLKLRQEGRLVN
CCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA