| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244629
Identifier: 21244629
GI number: 21244629
Start: 4595288
End: 4595629
Strand: Direct
Name: 21244629
Synonym: XAC3910
Alternate gene names: NA
Gene position: 4595288-4595629 (Clockwise)
Preceding gene: 21244628
Following gene: 21244630
Centisome position: 88.79
GC content: 59.65
Gene sequence:
>342_bases ATGGACCCGTCCTTTCTCGACCAGCAACTGACCTGGCTGTACTGGACAGGCATCCATGTGACCGGGTGGAAGCTGATCGG CTATGTCGGCGCGCTGATGTTCGGCGGCCGCTGGCTGGTGCAGTTCGTCGCCTCCAAACGCGCCGGCAAGCCGGTGATTC CGCGCCTGTTCTGGTACATGAGCGTGGTCGGCAGCTTGATGACGCTGAGCTATTTCGTGTTTTCGGCCAAGCAGGATTCG GTCGGTGTGCTGCAGAACCTGTTCCCGGCGTTCACGGCGTTTTACAGCCTGTATCTGGATGTGAAGCATCGTGGGTGGAA GCGGGATAGGGCCAGTCATTGA
Upstream 100 bases:
>100_bases AGTACAACAATCTCAATCGCGCCCTGGTCGGCATCCGCGACCTGCTCGGTGTGGCCTGGCTGATCACCCGCAGCAAGCGC ACAGTGGTGCAGGAACGCTG
Downstream 100 bases:
>100_bases GGCGGGGTTCGGGATTCGGGATTCGAATCGCCTGGTCCGGATGGTTGCCGGTGATCGAACGCTGTTGGTGAGCCGTGGCG GGTGGAGATGATCCCGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipid A Biosynthesis Domain-Containing Protein
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MDPSFLDQQLTWLYWTGIHVTGWKLIGYVGALMFGGRWLVQFVASKRAGKPVIPRLFWYMSVVGSLMTLSYFVFSAKQDS VGVLQNLFPAFTAFYSLYLDVKHRGWKRDRASH
Sequences:
>Translated_113_residues MDPSFLDQQLTWLYWTGIHVTGWKLIGYVGALMFGGRWLVQFVASKRAGKPVIPRLFWYMSVVGSLMTLSYFVFSAKQDS VGVLQNLFPAFTAFYSLYLDVKHRGWKRDRASH >Mature_113_residues MDPSFLDQQLTWLYWTGIHVTGWKLIGYVGALMFGGRWLVQFVASKRAGKPVIPRLFWYMSVVGSLMTLSYFVFSAKQDS VGVLQNLFPAFTAFYSLYLDVKHRGWKRDRASH
Specific function: Unknown
COG id: COG3952
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13058; Mature: 13058
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPSFLDQQLTWLYWTGIHVTGWKLIGYVGALMFGGRWLVQFVASKRAGKPVIPRLFWYM CCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHH SVVGSLMTLSYFVFSAKQDSVGVLQNLFPAFTAFYSLYLDVKHRGWKRDRASH HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDPSFLDQQLTWLYWTGIHVTGWKLIGYVGALMFGGRWLVQFVASKRAGKPVIPRLFWYM CCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHH SVVGSLMTLSYFVFSAKQDSVGVLQNLFPAFTAFYSLYLDVKHRGWKRDRASH HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA