| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244578
Identifier: 21244578
GI number: 21244578
Start: 4538874
End: 4539626
Strand: Reverse
Name: 21244578
Synonym: XAC3854
Alternate gene names: NA
Gene position: 4539626-4538874 (Counterclockwise)
Preceding gene: 21244579
Following gene: 21244577
Centisome position: 87.71
GC content: 63.88
Gene sequence:
>753_bases ATGAGCTCACTTGCACAGCGCGACGGCCAGGCGATCCAACTGGTCGGCTTCGATGGCGACGATACCCTCTGGAAAAGCGA GGACTATTACCGCACTGCCGAAGCGGATTTCGAAGCGATCCTGGCCGGGTACCTGGATCTGGGCGACAGCCGCATGCAGC AGCATCTGCTGGCGGTGGAGCGGCGCAACCTCAAGGTCTTCGGGTATGGCGCCAAGGGCATGACGCTGTCGATGATCGAA ACCGCGATCGAACTGACCCAGGCGCGCATTGCCGCGCACGATATCCAGCGCATCGTCGAGATCGGCCGTGCCACGCTGCA GCATCCGGTGGAAGTGATTGCCGGCGTACGCGAGGCAGTCGGTGTGATTGCCGCCGATTATCAGGTGGTGCTGATCACCA AGGGCGACCTGTTTCACCAGGAGCAGAAGATCGAGCAATCTGGCCTGGCCGATCTGTTCCCGCGCGTGGAAGTGGTGTCC GAAAAGGATCCCCGGACCTATGCGCGCGTGCTCGGCGAATTCGGTTTGCCGGCGCAGCAGTTTGCAATGATCGGCAATTC GCTGCGTTCGGATGTGGAACCGGTGCTGGCCATCGGGGGTTGGGGCATTTACACCCCGTACGCAGTGACCTGGGCGCACG AACAGGAGCACGGTGTCGCTGCCGACGAACCGCGCATGCGCGAAGTGCCCGACGCCGCCGGCTGGCCGGCAGCGGTGCAG GCGCTGGAAGCGTTGGCGCGGCGGCAGGGCTAG
Upstream 100 bases:
>100_bases CGCCTGTCGCGCGAGGAATTCGCCAGCTATCAGCCTGGCCCGGGCGATGCCGCAGGCGATTGAGCACGGCGCCATACCGG TGCGCTGCTAAACTTGCCCC
Downstream 100 bases:
>100_bases AGCGTGTCATGTACGTTGAGGTGAGTGCGAAGCGTCCTGTGGCGCGTCGAGACAAGGCGTGCGCTGCGGCCCAGGCTGGC CCGCCTGGGCAGGGCGCGCA
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: Haloacid Dehalogenase Domain Protein Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Hydrolase Haloacid Dehalogenase Family; Haloacid Dehydrogenase Hydrolase; Hydrolase Family Protein; Halogenase-Like Hydrolase; Haloacid Dehalogenase-Like Family Protein; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase Family Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Hydrolase Haloacid Dehalogenase Family Protein; HAD Family Phosphatase; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSSLAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILAGYLDLGDSRMQQHLLAVERRNLKVFGYGAKGMTLSMIE TAIELTQARIAAHDIQRIVEIGRATLQHPVEVIAGVREAVGVIAADYQVVLITKGDLFHQEQKIEQSGLADLFPRVEVVS EKDPRTYARVLGEFGLPAQQFAMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQEHGVAADEPRMREVPDAAGWPAAVQ ALEALARRQG
Sequences:
>Translated_250_residues MSSLAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILAGYLDLGDSRMQQHLLAVERRNLKVFGYGAKGMTLSMIE TAIELTQARIAAHDIQRIVEIGRATLQHPVEVIAGVREAVGVIAADYQVVLITKGDLFHQEQKIEQSGLADLFPRVEVVS EKDPRTYARVLGEFGLPAQQFAMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQEHGVAADEPRMREVPDAAGWPAAVQ ALEALARRQG >Mature_249_residues SSLAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILAGYLDLGDSRMQQHLLAVERRNLKVFGYGAKGMTLSMIET AIELTQARIAAHDIQRIVEIGRATLQHPVEVIAGVREAVGVIAADYQVVLITKGDLFHQEQKIEQSGLADLFPRVEVVSE KDPRTYARVLGEFGLPAQQFAMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQEHGVAADEPRMREVPDAAGWPAAVQA LEALARRQG
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27501; Mature: 27370
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILAGYLDLGDSRMQQHLLAVE CCCCHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RRNLKVFGYGAKGMTLSMIETAIELTQARIAAHDIQRIVEIGRATLQHPVEVIAGVREAV HCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVIAADYQVVLITKGDLFHQEQKIEQSGLADLFPRVEVVSEKDPRTYARVLGEFGLPAQQ HHHHCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHH FAMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQEHGVAADEPRMREVPDAAGWPAAVQ HHHHHHHHHHCCCHHEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHH ALEALARRQG HHHHHHHCCC >Mature Secondary Structure SSLAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILAGYLDLGDSRMQQHLLAVE CCCHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RRNLKVFGYGAKGMTLSMIETAIELTQARIAAHDIQRIVEIGRATLQHPVEVIAGVREAV HCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVIAADYQVVLITKGDLFHQEQKIEQSGLADLFPRVEVVSEKDPRTYARVLGEFGLPAQQ HHHHCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHH FAMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQEHGVAADEPRMREVPDAAGWPAAVQ HHHHHHHHHHCCCHHEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHH ALEALARRQG HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA