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The map label for this gene is ydcJ [H]

Identifier: 21244575

GI number: 21244575

Start: 4535492

End: 4536859

Strand: Reverse

Name: ydcJ [H]

Synonym: XAC3851

Alternate gene names: 21244575

Gene position: 4536859-4535492 (Counterclockwise)

Preceding gene: 21244576

Following gene: 21244571

Centisome position: 87.66

GC content: 66.3

Gene sequence:

>1368_bases
ATGCGCGATACCGCCTTTATCTCTCCCGATCAGATCCGCAGCTGGTTCGCCCAGGCGATGTCGGACATGTATCGCACCGA
GGTGCCGTTGTATGGCGATCTGATGTCGCTGGTGGCGCAGGTCAACGCACAGACGCTGCAAGCCAATCCGGCGCTGGCGC
AGCGGCTGCAGCGCAACGACGAGCGCGCGCGGCTGGATCTGGAACGGCACGGCGCCATCCGCGTCGGCACGGCGGCCGAA
CTGGCCACCTTGCGCCGGTTGTTCGCAGTGATGGGCATGCAGCCGGTGGGCTATTACGACCTGTCGGTGGCCGGCGTGCC
GGTGCATTCCACCGCGTTCCGCCCGATCGATGAGGCGGCGCTGTCGGCAAATCCGTTTCGCGTGTTCACCTCGCTGCTGC
GGCTGGAACTGATCGAAGACGCCGCCCTGCGCGAACAGGCACAGCAGATCCTGCAGCAGCGACAGATCTTTACCGTCGGC
GCCTTGCAGTTGATCGAGCGCTACGAACAGCAGGGCGGGCTGGATGCCGACCAGGCACGGCAGTTCGTGGCCGAAGCGCT
GGAAACCTTCCGCTGGCATGGCGATGCCACGGTGTCGTTGCCGACCTATCGCGCGCTGAGCCAGGCGCATAAGTTGATTG
CCGATGTGGTGAGCTTCCACGGCCCGCACATCAATCACCTCACGCCACGCACGTTGGACATCGATGCGGCGCAGGAACAG
ATGCAGCGCGCCGGCATCGATGCCAAGGCGGTGATCGAGGGGCCGCCGCGTCGGCGCGTGCCGATCCTGTTGCGGCAGAC
CAGTTTCAAGGCGCTGGAAGAGCCGGTGCGTTTTGTCGGCGATGACGGGCAACCGGAACACGGCACGCATACCGCACGCT
TTGGCGAGATCGAGCAGCGCGGCCTTGCCCTCACGCCAAAGGGCCGCGCGTTGTACGACGCGCTGCTGGCGCAGGCGCGC
GATGCCGATGGCGCCGGCAGCACCGGCACCGATTACGCCACCCGGCTGCAGACTGCCTTCGTGGCCTTCCCCGACGACGA
GGCGTTGCTGCGGCAGGAAGGGCTGGGCTATTTCCGCTATGCGCTCACCGACGCCGGCCGCGCCGATCCCGCGCAGGTGG
CCGCCATGCCGGCAGAAACCGCGATCGCGCTCGGCTTGGTCAGTGCCGACCCGATCATCTACGAAGATTTTTTGCCGGTC
AGCGCGGCCGGCATCTTCCAGTCCAACCTCGGTGGTGCCGAGCAACGCGCCTATGCCGCCCATTCGAGCAAGCGCAGTTT
CGAGCAGGCGCTCGGTGCGCAGGTGCACGACGAATTCGCGCTGTATGCGCAGTTGGAGCGGGAGTCCCTGCAGGGGTTGC
TGGCGTAG

Upstream 100 bases:

>100_bases
CGTCGCCTGCGATGCTGCCGTGCCGCTGGTCGACGCAGGGCGCGGTCGGCGAGAATGCGGTACCGCTGGCGTTCGGCCGG
CACCTGCCCAAGACCAGCCC

Downstream 100 bases:

>100_bases
CACGCGCCGCATGCGGCGGCGTCGGCGGTATCAAGTGGGGCTCAGCGCGTGCGTATGTGCTTGCTTTACGCAGGTGTCGT
CGCACCACGGCATGGGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MRDTAFISPDQIRSWFAQAMSDMYRTEVPLYGDLMSLVAQVNAQTLQANPALAQRLQRNDERARLDLERHGAIRVGTAAE
LATLRRLFAVMGMQPVGYYDLSVAGVPVHSTAFRPIDEAALSANPFRVFTSLLRLELIEDAALREQAQQILQQRQIFTVG
ALQLIERYEQQGGLDADQARQFVAEALETFRWHGDATVSLPTYRALSQAHKLIADVVSFHGPHINHLTPRTLDIDAAQEQ
MQRAGIDAKAVIEGPPRRRVPILLRQTSFKALEEPVRFVGDDGQPEHGTHTARFGEIEQRGLALTPKGRALYDALLAQAR
DADGAGSTGTDYATRLQTAFVAFPDDEALLRQEGLGYFRYALTDAGRADPAQVAAMPAETAIALGLVSADPIIYEDFLPV
SAAGIFQSNLGGAEQRAYAAHSSKRSFEQALGAQVHDEFALYAQLERESLQGLLA

Sequences:

>Translated_455_residues
MRDTAFISPDQIRSWFAQAMSDMYRTEVPLYGDLMSLVAQVNAQTLQANPALAQRLQRNDERARLDLERHGAIRVGTAAE
LATLRRLFAVMGMQPVGYYDLSVAGVPVHSTAFRPIDEAALSANPFRVFTSLLRLELIEDAALREQAQQILQQRQIFTVG
ALQLIERYEQQGGLDADQARQFVAEALETFRWHGDATVSLPTYRALSQAHKLIADVVSFHGPHINHLTPRTLDIDAAQEQ
MQRAGIDAKAVIEGPPRRRVPILLRQTSFKALEEPVRFVGDDGQPEHGTHTARFGEIEQRGLALTPKGRALYDALLAQAR
DADGAGSTGTDYATRLQTAFVAFPDDEALLRQEGLGYFRYALTDAGRADPAQVAAMPAETAIALGLVSADPIIYEDFLPV
SAAGIFQSNLGGAEQRAYAAHSSKRSFEQALGAQVHDEFALYAQLERESLQGLLA
>Mature_455_residues
MRDTAFISPDQIRSWFAQAMSDMYRTEVPLYGDLMSLVAQVNAQTLQANPALAQRLQRNDERARLDLERHGAIRVGTAAE
LATLRRLFAVMGMQPVGYYDLSVAGVPVHSTAFRPIDEAALSANPFRVFTSLLRLELIEDAALREQAQQILQQRQIFTVG
ALQLIERYEQQGGLDADQARQFVAEALETFRWHGDATVSLPTYRALSQAHKLIADVVSFHGPHINHLTPRTLDIDAAQEQ
MQRAGIDAKAVIEGPPRRRVPILLRQTSFKALEEPVRFVGDDGQPEHGTHTARFGEIEQRGLALTPKGRALYDALLAQAR
DADGAGSTGTDYATRLQTAFVAFPDDEALLRQEGLGYFRYALTDAGRADPAQVAAMPAETAIALGLVSADPIIYEDFLPV
SAAGIFQSNLGGAEQRAYAAHSSKRSFEQALGAQVHDEFALYAQLERESLQGLLA

Specific function: Unknown

COG id: COG5383

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv3292 [H]

Homologues:

Organism=Escherichia coli, GI1787692, Length=446, Percent_Identity=61.6591928251121, Blast_Score=524, Evalue=1e-150,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009770 [H]

Pfam domain/function: PF07063 DUF1338 [H]

EC number: NA

Molecular weight: Translated: 49991; Mature: 49991

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDTAFISPDQIRSWFAQAMSDMYRTEVPLYGDLMSLVAQVNAQTLQANPALAQRLQRND
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
ERARLDLERHGAIRVGTAAELATLRRLFAVMGMQPVGYYDLSVAGVPVHSTAFRPIDEAA
HHHHCCHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHH
LSANPFRVFTSLLRLELIEDAALREQAQQILQQRQIFTVGALQLIERYEQQGGLDADQAR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QFVAEALETFRWHGDATVSLPTYRALSQAHKLIADVVSFHGPHINHLTPRTLDIDAAQEQ
HHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHHH
MQRAGIDAKAVIEGPPRRRVPILLRQTSFKALEEPVRFVGDDGQPEHGTHTARFGEIEQR
HHHCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCHHHC
GLALTPKGRALYDALLAQARDADGAGSTGTDYATRLQTAFVAFPDDEALLRQEGLGYFRY
CEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECCCHHHHHHHCCCCHHHH
ALTDAGRADPAQVAAMPAETAIALGLVSADPIIYEDFLPVSAAGIFQSNLGGAEQRAYAA
HHCCCCCCCHHHHHHCCHHHHHHHEECCCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHH
HSSKRSFEQALGAQVHDEFALYAQLERESLQGLLA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRDTAFISPDQIRSWFAQAMSDMYRTEVPLYGDLMSLVAQVNAQTLQANPALAQRLQRND
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
ERARLDLERHGAIRVGTAAELATLRRLFAVMGMQPVGYYDLSVAGVPVHSTAFRPIDEAA
HHHHCCHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHH
LSANPFRVFTSLLRLELIEDAALREQAQQILQQRQIFTVGALQLIERYEQQGGLDADQAR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
QFVAEALETFRWHGDATVSLPTYRALSQAHKLIADVVSFHGPHINHLTPRTLDIDAAQEQ
HHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHHH
MQRAGIDAKAVIEGPPRRRVPILLRQTSFKALEEPVRFVGDDGQPEHGTHTARFGEIEQR
HHHCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCHHHC
GLALTPKGRALYDALLAQARDADGAGSTGTDYATRLQTAFVAFPDDEALLRQEGLGYFRY
CEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECCCHHHHHHHCCCCHHHH
ALTDAGRADPAQVAAMPAETAIALGLVSADPIIYEDFLPVSAAGIFQSNLGGAEQRAYAA
HHCCCCCCCHHHHHHCCHHHHHHHEECCCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHH
HSSKRSFEQALGAQVHDEFALYAQLERESLQGLLA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]