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The map label for this gene is tse [H]

Identifier: 21244493

GI number: 21244493

Start: 4443741

End: 4445873

Strand: Direct

Name: tse [H]

Synonym: XAC3768

Alternate gene names: 21244493

Gene position: 4443741-4445873 (Clockwise)

Preceding gene: 21244492

Following gene: 21244494

Centisome position: 85.86

GC content: 63.62

Gene sequence:

>2133_bases
GTGATCGCCCACCTGCTCGAGAGCCATGTCATGAAACGCATCCTGTCGCTACCGTTGTTCTGGAAAATCCTGATGCCGGC
AGCGGTGGCAATCGTTTGCCTGTCGGGCTATGTGGCTTTCAGCACGCTGGTGTTCCATCGCAACAACGATCGCCTGGAAG
CGGTGCGCGACGTGCATTTCCCGATGCTCGACGCGATGACGCGCAATGTGGCCGCGCTGGACAAGCTCATCAACGGGCTC
AATGGCGCGGCGGCAGCAGGCGATGCCGACATGCTGGCGGCCACCAAGCCGGTGGCCGACGAGATCCACGGCTCTTACGT
GAAACTGCAAAAATCCGATCCGGCCAATGCGCAGGAACTGGCCCGTCTGGGCAAGCAGTTCGATCGGTACTACAGCCTGG
CGCAGGGCGTGGCGGCGGCATTCGTGGAGCAACGCGAACCCGATGCCGCGCAGATGAGCGCCATGGCACCGGCGCTGGAG
ACGTACCGCACCAATCTCACCGCCATGCAGAAGCGCGCCGATGCACGCTTCCGCGGCACCGTGCAGGAAGCGGTGGACAG
CTCGGTCACCGCCAGCATCACCGGCCTGATCCTGGGCCTGGTCGGTGCGGTGGTATGCATTGGATTCGGCTGGCTCGTGG
CGCGCGCCATCACCCAACCGCTCAACCGTGCCGTGGGCATCGCGCATGCGGTGTCGTCGGGCAAGCTGGACAACGCCATC
TCGATCGACCGCAACGATGAGGTCGGACAGCTGTTGCAGGCAATGGACAGCATGCAGCGTCAGCTGCGCCGCGTGATCCA
GGCGCAGACCGAAATGGGCGAAAAACACGAAGCCGGCGTGGTCAGCCACCGTATCGCCGAACAGGAGTTCCCAGGCGAAT
TCGGCAGCATGGTGCGCGCCAGCAACGCATTGGTGGCCGGGCATATCGCAGTGACCATGCAAATCGTCGCATTGACCGAG
CGCTATGCTGCCGGCGATTTGTCGCAGCAGCTGGAGCCGTTGCCGGGCGAGAAGGCGGTGATCAGCCAATCGCTCAACGA
CGTGCGCGCCAGCCTGTTGTCGATCAACGGCGAGATCAAGCGCCTGGCCTCGGCCGCAGCGGCAGGCGACTTCACCGCGC
GTGGCGACGAAACCGCGTTCGAGCACGACTTCCGCCAGATCGTGGTGGACCTCAACCAGCTGATGAGTACCTCGGACCAG
AGCCTGGGTGCGTTGTCGCAGGTGTTGCAGGCCATCGCCAGCGGCGACCTGACCGCACGCATGCACGGCAACTTCGCCGG
CGTGTTCGCCCGCATGCGCGACGATGCCAACACCACGGTGGAACGTCTGACCGATATCGTCGGGCGCATTCAACATTCTT
CGTCGGAAATCGATACTGCCGCCGGCGAGATTGCGGCCGGTAATCAGGATCTGTCGCGGCGCACCGAACAACAGGCCGCC
AACCTGGAAGAAACCGCTGCATCGATGGAAGAGCTCACCGCCACGGTCAAGCAAAACGCCGAGCACGCACGCCAGGCCAA
CGAACTGGCACGTAGCGCCGCCGGCGTGGCGTCGAAGGGAGGCGAAGTGGTCAGCCAGGTGGTCGGTACCATGTCGGGTA
TCGAAACCTCTTCGAAGAAGATTGCCGAGATCATCAGCGTCATCGACGGCATCGCCTTCCAGACCAATATCCTGGCGCTC
AATGCCGCGGTGGAAGCCGCGCGTGCCGGCGAACAAGGCCGCGGGTTTGCCGTGGTGGCAAGCGAAGTGCGCTCGCTGGC
ACAGCGCTCCTCCGGCGCGGCGAAGGAGATCAAGGATTTGATCGACGCCTCGGTAGGCAAGGTGGCCGAAGGCTCGGCGT
TGGTGCACAAGGCCGGCACCACCATGACCGAGATCGTGGCCAGCGTGAACCGTGTCACCGACATCATGGGGCAGATCACC
GCTGCCTCCATCGAACAGTCGAGCGGCATCGAGCAGGTCAACCAGACCGTGATCCAGATGGACGAAACCACCCAGCAAAA
CGCCGCCCTGGTGGAAGAAGCGATGGCCGCCGCGCGCGCGATGGAAAAGCAATCCAGCACCCTCACCCAGCTGGTGTCGC
TGTTTCAACTGGAGCCTGCGACCGCCCAGCACCTGGAAAAACACGTCGCCTGA

Upstream 100 bases:

>100_bases
GCGACGACGCGGTCAAGAAGGCGGTGGCATCCACGCCGGGCGCCATCGGCTATATCAGTGCCAGCGCCGTCGACCCCAGC
GTCAAGGTCGTCCTGAAGCC

Downstream 100 bases:

>100_bases
TGCGTCGATCCGCCAGGCGGGTCGACATGCTGCAAGCTGAAGACCCCCTTCTGCATGGAATGCAGAAGGGGGTTTTTTTA
TTTGCACCGAGGCGAACGTG

Product: chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 710; Mature: 710

Protein sequence:

>710_residues
MIAHLLESHVMKRILSLPLFWKILMPAAVAIVCLSGYVAFSTLVFHRNNDRLEAVRDVHFPMLDAMTRNVAALDKLINGL
NGAAAAGDADMLAATKPVADEIHGSYVKLQKSDPANAQELARLGKQFDRYYSLAQGVAAAFVEQREPDAAQMSAMAPALE
TYRTNLTAMQKRADARFRGTVQEAVDSSVTASITGLILGLVGAVVCIGFGWLVARAITQPLNRAVGIAHAVSSGKLDNAI
SIDRNDEVGQLLQAMDSMQRQLRRVIQAQTEMGEKHEAGVVSHRIAEQEFPGEFGSMVRASNALVAGHIAVTMQIVALTE
RYAAGDLSQQLEPLPGEKAVISQSLNDVRASLLSINGEIKRLASAAAAGDFTARGDETAFEHDFRQIVVDLNQLMSTSDQ
SLGALSQVLQAIASGDLTARMHGNFAGVFARMRDDANTTVERLTDIVGRIQHSSSEIDTAAGEIAAGNQDLSRRTEQQAA
NLEETAASMEELTATVKQNAEHARQANELARSAAGVASKGGEVVSQVVGTMSGIETSSKKIAEIISVIDGIAFQTNILAL
NAAVEAARAGEQGRGFAVVASEVRSLAQRSSGAAKEIKDLIDASVGKVAEGSALVHKAGTTMTEIVASVNRVTDIMGQIT
AASIEQSSGIEQVNQTVIQMDETTQQNAALVEEAMAAARAMEKQSSTLTQLVSLFQLEPATAQHLEKHVA

Sequences:

>Translated_710_residues
MIAHLLESHVMKRILSLPLFWKILMPAAVAIVCLSGYVAFSTLVFHRNNDRLEAVRDVHFPMLDAMTRNVAALDKLINGL
NGAAAAGDADMLAATKPVADEIHGSYVKLQKSDPANAQELARLGKQFDRYYSLAQGVAAAFVEQREPDAAQMSAMAPALE
TYRTNLTAMQKRADARFRGTVQEAVDSSVTASITGLILGLVGAVVCIGFGWLVARAITQPLNRAVGIAHAVSSGKLDNAI
SIDRNDEVGQLLQAMDSMQRQLRRVIQAQTEMGEKHEAGVVSHRIAEQEFPGEFGSMVRASNALVAGHIAVTMQIVALTE
RYAAGDLSQQLEPLPGEKAVISQSLNDVRASLLSINGEIKRLASAAAAGDFTARGDETAFEHDFRQIVVDLNQLMSTSDQ
SLGALSQVLQAIASGDLTARMHGNFAGVFARMRDDANTTVERLTDIVGRIQHSSSEIDTAAGEIAAGNQDLSRRTEQQAA
NLEETAASMEELTATVKQNAEHARQANELARSAAGVASKGGEVVSQVVGTMSGIETSSKKIAEIISVIDGIAFQTNILAL
NAAVEAARAGEQGRGFAVVASEVRSLAQRSSGAAKEIKDLIDASVGKVAEGSALVHKAGTTMTEIVASVNRVTDIMGQIT
AASIEQSSGIEQVNQTVIQMDETTQQNAALVEEAMAAARAMEKQSSTLTQLVSLFQLEPATAQHLEKHVA
>Mature_710_residues
MIAHLLESHVMKRILSLPLFWKILMPAAVAIVCLSGYVAFSTLVFHRNNDRLEAVRDVHFPMLDAMTRNVAALDKLINGL
NGAAAAGDADMLAATKPVADEIHGSYVKLQKSDPANAQELARLGKQFDRYYSLAQGVAAAFVEQREPDAAQMSAMAPALE
TYRTNLTAMQKRADARFRGTVQEAVDSSVTASITGLILGLVGAVVCIGFGWLVARAITQPLNRAVGIAHAVSSGKLDNAI
SIDRNDEVGQLLQAMDSMQRQLRRVIQAQTEMGEKHEAGVVSHRIAEQEFPGEFGSMVRASNALVAGHIAVTMQIVALTE
RYAAGDLSQQLEPLPGEKAVISQSLNDVRASLLSINGEIKRLASAAAAGDFTARGDETAFEHDFRQIVVDLNQLMSTSDQ
SLGALSQVLQAIASGDLTARMHGNFAGVFARMRDDANTTVERLTDIVGRIQHSSSEIDTAAGEIAAGNQDLSRRTEQQAA
NLEETAASMEELTATVKQNAEHARQANELARSAAGVASKGGEVVSQVVGTMSGIETSSKKIAEIISVIDGIAFQTNILAL
NAAVEAARAGEQGRGFAVVASEVRSLAQRSSGAAKEIKDLIDASVGKVAEGSALVHKAGTTMTEIVASVNRVTDIMGQIT
AASIEQSSGIEQVNQTVIQMDETTQQNAALVEEAMAAARAMEKQSSTLTQLVSLFQLEPATAQHLEKHVA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=290, Percent_Identity=61.3793103448276, Blast_Score=288, Evalue=7e-79,
Organism=Escherichia coli, GI1788194, Length=304, Percent_Identity=56.578947368421, Blast_Score=286, Evalue=3e-78,
Organism=Escherichia coli, GI1788195, Length=255, Percent_Identity=67.0588235294118, Blast_Score=285, Evalue=8e-78,
Organism=Escherichia coli, GI1787690, Length=294, Percent_Identity=57.1428571428571, Blast_Score=275, Evalue=1e-74,
Organism=Escherichia coli, GI1789453, Length=251, Percent_Identity=43.4262948207171, Blast_Score=199, Evalue=5e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 75423; Mature: 75423

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAHLLESHVMKRILSLPLFWKILMPAAVAIVCLSGYVAFSTLVFHRNNDRLEAVRDVHF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
PMLDAMTRNVAALDKLINGLNGAAAAGDADMLAATKPVADEIHGSYVKLQKSDPANAQEL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHCCCEEEEECCCCCCHHHH
ARLGKQFDRYYSLAQGVAAAFVEQREPDAAQMSAMAPALETYRTNLTAMQKRADARFRGT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQEAVDSSVTASITGLILGLVGAVVCIGFGWLVARAITQPLNRAVGIAHAVSSGKLDNAI
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
SIDRNDEVGQLLQAMDSMQRQLRRVIQAQTEMGEKHEAGVVSHRIAEQEFPGEFGSMVRA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
SNALVAGHIAVTMQIVALTERYAAGDLSQQLEPLPGEKAVISQSLNDVRASLLSINGEIK
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLASAAAAGDFTARGDETAFEHDFRQIVVDLNQLMSTSDQSLGALSQVLQAIASGDLTAR
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEE
MHGNFAGVFARMRDDANTTVERLTDIVGRIQHSSSEIDTAAGEIAAGNQDLSRRTEQQAA
ECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCHHCCCCHHHHHHHHHHHH
NLEETAASMEELTATVKQNAEHARQANELARSAAGVASKGGEVVSQVVGTMSGIETSSKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
IAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSGAAKEIKDL
HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
IDASVGKVAEGSALVHKAGTTMTEIVASVNRVTDIMGQITAASIEQSSGIEQVNQTVIQM
HHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
DETTQQNAALVEEAMAAARAMEKQSSTLTQLVSLFQLEPATAQHLEKHVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MIAHLLESHVMKRILSLPLFWKILMPAAVAIVCLSGYVAFSTLVFHRNNDRLEAVRDVHF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
PMLDAMTRNVAALDKLINGLNGAAAAGDADMLAATKPVADEIHGSYVKLQKSDPANAQEL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHCCCEEEEECCCCCCHHHH
ARLGKQFDRYYSLAQGVAAAFVEQREPDAAQMSAMAPALETYRTNLTAMQKRADARFRGT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQEAVDSSVTASITGLILGLVGAVVCIGFGWLVARAITQPLNRAVGIAHAVSSGKLDNAI
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
SIDRNDEVGQLLQAMDSMQRQLRRVIQAQTEMGEKHEAGVVSHRIAEQEFPGEFGSMVRA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
SNALVAGHIAVTMQIVALTERYAAGDLSQQLEPLPGEKAVISQSLNDVRASLLSINGEIK
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLASAAAAGDFTARGDETAFEHDFRQIVVDLNQLMSTSDQSLGALSQVLQAIASGDLTAR
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEE
MHGNFAGVFARMRDDANTTVERLTDIVGRIQHSSSEIDTAAGEIAAGNQDLSRRTEQQAA
ECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCHHCCCCHHHHHHHHHHHH
NLEETAASMEELTATVKQNAEHARQANELARSAAGVASKGGEVVSQVVGTMSGIETSSKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
IAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSGAAKEIKDL
HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
IDASVGKVAEGSALVHKAGTTMTEIVASVNRVTDIMGQITAASIEQSSGIEQVNQTVIQM
HHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
DETTQQNAALVEEAMAAARAMEKQSSTLTQLVSLFQLEPATAQHLEKHVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]