| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244483
Identifier: 21244483
GI number: 21244483
Start: 4434689
End: 4436125
Strand: Reverse
Name: 21244483
Synonym: XAC3758
Alternate gene names: NA
Gene position: 4436125-4434689 (Counterclockwise)
Preceding gene: 21244484
Following gene: 21244482
Centisome position: 85.71
GC content: 66.88
Gene sequence:
>1437_bases ATGAATCCGGTGTTGTTGGTCGCGCGCGAAGAACTGCGCTATATGGCGCGCAACCGGTCCGCGGCCATTGGCGTGGTGTT GCTGATGTTGCTCACCCTGGTGGCGGCGTTGACCGCTGCGCACCACCAGCGCGAAGTGGCCGATTTCCGCGCGCGGCAGC AACAGGCAGCGCAGCAGGCGTTCGAAGCACAGCCGGACCGGCATCCGCACCGCGTGGTGCACTACGGCCATTTCATCTAT CGCCCGTTGCCGGCGCTGGCTGCATTCGATTCCGGCGTGGATGCGTTCACCGGCAACAGCATGTTTCTGGAAGGGCACCG CCAGAACACTGCCAACTTCGGCGATGTGCGTCAGAGTTCGTTGCTGGTGCGTTTCGGTCAGCTGACGCCCGCCTTCGTGC TGCAAGTGCTGGCGCCGCTGATGCTGGTCTTCCTGGGTTATGGCGCAGTGGCGCGCGAGCAGGAAACCGGCACCTTGCGC GCGCTGTTGCTGCAGGGCGCCACGCGCCGGCAGTTGCTCGGCGGCAAATATCTCGCGCTGGCGGCGGTGGCCGGCGCCTG CCTGCTGCCGGCCTTGATCGGCCTGGCACCGATTGCGTTGTTGCCAGGGCAAGCGCCGCTGGTGGCGCTGCTGGTGCTGG CCTATGGCGCGTATCTGCTGGTGTGGTGTGCGCTGGTGCTGGTGGTGTCGCTGCTGTGCCGACGCGGCCGCGATGCGCTG TTGGTGTCGCTGGCGGTGTGGGTGTGGCTGGCCTTGCTGGTGCCGCGCGTGGCGCCGGACGCGGCCAGTGCCGCGTACCG CCTGCCGACCCGGTTGGAAACCGATGTGGCGATCCAGCGCGATCTGCGCACGCTCGGCGACAGCCACAATCCGGACGACC CGCACTTTGCGCAATTCAAGCAGCAGACGCTGGCCCGTTACGGCGTGCAGCGCGTGGAAGACCTGCCGGTGAACTACAAG GGCTTGCTGGCACTGGAAGGCGAGCGGCTGAGCGCAAGCCTGTTCGAGCGGTATGCAGGCCGCGATGCGTCCATCCAGCA GCAACAGAACCTGCTGGTACGCACATTTGCGTTGCTCAGCCCGACGGTGGCGCTGCGCGAGGTGTCAATGACGCTGGCGG AAACCGACCTGCGCGCGCATCTGCGGTTCCTGGCGCAGGCTGAGCACTACCGCTACACGCTGGTGCAGCAGCTCAACCAA CTGCAGGCCGACGCGGTCAGCATGGCCGACGACACCGCACAGGATGCAGGCGCCGATCGCCGCAAGCGGATTTCGTCCGA GCACTGGCATGAGATTCCGGTGTTCGCCTTCCAGCCGGTGTCGGCGACCGAGGTGATCGGTACGGCAGGTGCGGCGTTCG GCCTGATCGGGGCCTGGCTGCTTGCTGCGCTGTGCATGCTGGTGGCAGCCGGGCGAGGTGTGGGAGTGGCGCGCTGA
Upstream 100 bases:
>100_bases ATTGCCGAAGAGATCGGTGCCGGCGACAGCGGCTTCGATGTGCGCACCCTGCATGCGCGTTTCGCGCGCCCGCAGGATCG CGCTGCGTGAGGCTGCACGT
Downstream 100 bases:
>100_bases TGGTGCTGTGGAAATACGAACTGCTGTTGCTGCTGCGCGTACGTGCGGCGCTCGCCGGGTTGCTGTTGCTTGCGCTGCTC ACCGTGTGCAGCCTGCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter Permease; ABC Transporter Permease Protein; ABC-Type Transport System Permease Component
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MNPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQREVADFRARQQQAAQQAFEAQPDRHPHRVVHYGHFIY RPLPALAAFDSGVDAFTGNSMFLEGHRQNTANFGDVRQSSLLVRFGQLTPAFVLQVLAPLMLVFLGYGAVAREQETGTLR ALLLQGATRRQLLGGKYLALAAVAGACLLPALIGLAPIALLPGQAPLVALLVLAYGAYLLVWCALVLVVSLLCRRGRDAL LVSLAVWVWLALLVPRVAPDAASAAYRLPTRLETDVAIQRDLRTLGDSHNPDDPHFAQFKQQTLARYGVQRVEDLPVNYK GLLALEGERLSASLFERYAGRDASIQQQQNLLVRTFALLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRYTLVQQLNQ LQADAVSMADDTAQDAGADRRKRISSEHWHEIPVFAFQPVSATEVIGTAGAAFGLIGAWLLAALCMLVAAGRGVGVAR
Sequences:
>Translated_478_residues MNPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQREVADFRARQQQAAQQAFEAQPDRHPHRVVHYGHFIY RPLPALAAFDSGVDAFTGNSMFLEGHRQNTANFGDVRQSSLLVRFGQLTPAFVLQVLAPLMLVFLGYGAVAREQETGTLR ALLLQGATRRQLLGGKYLALAAVAGACLLPALIGLAPIALLPGQAPLVALLVLAYGAYLLVWCALVLVVSLLCRRGRDAL LVSLAVWVWLALLVPRVAPDAASAAYRLPTRLETDVAIQRDLRTLGDSHNPDDPHFAQFKQQTLARYGVQRVEDLPVNYK GLLALEGERLSASLFERYAGRDASIQQQQNLLVRTFALLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRYTLVQQLNQ LQADAVSMADDTAQDAGADRRKRISSEHWHEIPVFAFQPVSATEVIGTAGAAFGLIGAWLLAALCMLVAAGRGVGVAR >Mature_478_residues MNPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQREVADFRARQQQAAQQAFEAQPDRHPHRVVHYGHFIY RPLPALAAFDSGVDAFTGNSMFLEGHRQNTANFGDVRQSSLLVRFGQLTPAFVLQVLAPLMLVFLGYGAVAREQETGTLR ALLLQGATRRQLLGGKYLALAAVAGACLLPALIGLAPIALLPGQAPLVALLVLAYGAYLLVWCALVLVVSLLCRRGRDAL LVSLAVWVWLALLVPRVAPDAASAAYRLPTRLETDVAIQRDLRTLGDSHNPDDPHFAQFKQQTLARYGVQRVEDLPVNYK GLLALEGERLSASLFERYAGRDASIQQQQNLLVRTFALLSPTVALREVSMTLAETDLRAHLRFLAQAEHYRYTLVQQLNQ LQADAVSMADDTAQDAGADRRKRISSEHWHEIPVFAFQPVSATEVIGTAGAAFGLIGAWLLAALCMLVAAGRGVGVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52174; Mature: 52174
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQREVADFRARQQQAAQQA CCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEAQPDRHPHRVVHYGHFIYRPLPALAAFDSGVDAFTGNSMFLEGHRQNTANFGDVRQSS HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH LLVRFGQLTPAFVLQVLAPLMLVFLGYGAVAREQETGTLRALLLQGATRRQLLGGKYLAL HHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCHHHHHHCCHHHHH AAVAGACLLPALIGLAPIALLPGQAPLVALLVLAYGAYLLVWCALVLVVSLLCRRGRDAL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LVSLAVWVWLALLVPRVAPDAASAAYRLPTRLETDVAIQRDLRTLGDSHNPDDPHFAQFK HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH QQTLARYGVQRVEDLPVNYKGLLALEGERLSASLFERYAGRDASIQQQQNLLVRTFALLS HHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH PTVALREVSMTLAETDLRAHLRFLAQAEHYRYTLVQQLNQLQADAVSMADDTAQDAGADR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RKRISSEHWHEIPVFAFQPVSATEVIGTAGAAFGLIGAWLLAALCMLVAAGRGVGVAR HHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNPVLLVAREELRYMARNRSAAIGVVLLMLLTLVAALTAAHHQREVADFRARQQQAAQQA CCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEAQPDRHPHRVVHYGHFIYRPLPALAAFDSGVDAFTGNSMFLEGHRQNTANFGDVRQSS HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH LLVRFGQLTPAFVLQVLAPLMLVFLGYGAVAREQETGTLRALLLQGATRRQLLGGKYLAL HHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCHHHHHHCCHHHHH AAVAGACLLPALIGLAPIALLPGQAPLVALLVLAYGAYLLVWCALVLVVSLLCRRGRDAL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LVSLAVWVWLALLVPRVAPDAASAAYRLPTRLETDVAIQRDLRTLGDSHNPDDPHFAQFK HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH QQTLARYGVQRVEDLPVNYKGLLALEGERLSASLFERYAGRDASIQQQQNLLVRTFALLS HHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH PTVALREVSMTLAETDLRAHLRFLAQAEHYRYTLVQQLNQLQADAVSMADDTAQDAGADR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RKRISSEHWHEIPVFAFQPVSATEVIGTAGAAFGLIGAWLLAALCMLVAAGRGVGVAR HHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA