| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fct [H]
Identifier: 21244481
GI number: 21244481
Start: 4431191
End: 4433335
Strand: Reverse
Name: fct [H]
Synonym: XAC3756
Alternate gene names: 21244481
Gene position: 4433335-4431191 (Counterclockwise)
Preceding gene: 21244482
Following gene: 21244476
Centisome position: 85.66
GC content: 64.99
Gene sequence:
>2145_bases ATGCCCGTGTTCCCGCGCCGCCGCATGCTGCACGCGCTCCCTTTGCTCAGCCTGCTGGCCTGCGCCTGCGGCATTGCCTG CGCGCAGGCTGCGCAGTCGCAGGCGCGCGATTTGGATGCGGTGCAGGTGCGCAGCCAGTACACCCCTTATCGCGCGCTGA GCATTACCGGTGCCACCAAGACCGATGCGTCGCTGCGTGATCTGCCCATCAGTGCGCGGGTGCTCGACCGGACCTTGCTC GAAGATGCGGGCGTCACCGATCTGGCTGGCGCGCTGGAGCTGGCCAGCGGCATCACCAAGGCCAACAACCTGGGCGGGTT ATGGGACAGCTATTCGATGCGCGGCTTTACCGGCGACCCGAATTTCAGTTCGGATTACATGGTCAACGGCTTCAATGCCA GCCGCGGTTACAACGGCCTGCGCGATGCGGCCAACACGCAGAGCATCGAGGTGATCAAGGGGCCGGCGTCGGCGTTGTAC GGGCGCGGCGAGCCGGGCGGGGCCGTCAACATCGTCACTAAAAAGCCGCTGTTTCAGCCGCAGCACAGCGTGGATGTATC GGCAGGCAGCTTCGACAGCTATCGCGCGGCCATCGATAGCACCGGCCCCCTGAGCGAGAACGTGGCGTATCGTCTGAATG TGATGCACAAGGATCAACACAGCTTTCGCGATACCGTCGACAGCGACCGCACCTTGCTGGCGCCGTCGCTGTTGTGGATG CCGGCGCCCGATACGACGGTGTCGTATGAGCTGGAGGCGGTGCGTCTCCACACGCCATTCGATCGGGGCGTGACGGCTAT CGGTGGCGATGCCAACCGGCTGCCGGCCTCGCGCTTTCTCGGCGAACCGCGTGATGGCGATATCGACCTGCATTCCACCG GGCACCAGGTATTCGTGGTGCACGGTCTGGATCAGACCTGGTCGTTGCAGGGTGGGGCGACTTACCGCGACAGTGGCATG CGTGGATTTTCCACCGAACCCTGGACGCTGCAGGCCGACCAGCGCAGCTTGCGCCGCGAACGCCGCTATCGCGATTACCA GGGCCGCGATATCGCGGCGCGTGCAGAAGTGCTTGGCGGTTTTCAGGCCGGCAGGGTCACGCACAATGTGTTGTTCGGCA TCGATGGCAATCGCTCCGACGACAGCCGCTTTCAGCAGCGCGCCCGTTCCGCGGCCACGCCCTACAGCATCGATGTGCTG GCGCCGCGCTATGGCGTGGCACAGCCAGGCCGGCTGTCCACCATCACCGATACCGACGAGCGCCAGCAGGTGTGGGGCGT GTATGCACAGGACCAGATCGACCTGGGCGCGCGCTGGAAGGCCTTGCTTGGCCTGCGCTACGACCATTATCAGCAACAAG ACCTGGACAACCACCTGCGCGGCACCACGCAGCGCGCATCCGACGGCGTGGTGAGCCCGCGTGCAGGCATGACCTTGCAT GTCGACGATGCGCTGTCGCTGTATGCCAGTGCCGCGGCGGGTTTTCGCCCCAACAGCGGTGTGGGCGCCAACGGGCAAAG CTTTGCACCTGAGAAAAGCCGCTCGCTGGAGGCCGGATTGAAATACGTGCAGCCCGGCGATGGCCTGGAAGCCACGGTGG CCGCATTCCGCATCGACAAGAAAAACGTATTGAGCCTGGATCCGGCCGACACCAGTTTTTCGCTGCCGGTGGGCCAGATG CGCAGCCAAGGGCTGGAGCTGGATCTGCTCGGCAGGCTGAGCCCGCGCCTGGCCGCGTCGGTGGGCCTGGCCTATACCGA TTCGCAGGTGACGCGCAGCAGTGCTGCCGCCGCCAGTACCGGGCTGGCCGAAGGCCGGCGGTTTCCGAATGTGCCGCGCT TGAGCGGTAACGCGTTCTTGAACTACGAGCAGCCGCTGACCGGCAAACGTAGCGCGGCGTTGGGTGTGGGCGTCTCGCAC ACGGGCGAGCGGCTGGGCTCGGTGGATAGCAACACCGATTTCGTGCTGCCGGCTTACACCGTGTGGCGAGCGGTTGGCCA CTACGATCTGAGCGAGCGGCTACGCCTGTATGCCAAGGTCGAGAACCTCACCGATCGCCGCTATGCGGCATTTTCGTATA GCGAGCAGTGGGTGTATCCCGGTGCGCCGCGGAGCTGGACGGTGGGTGCGCAGTTTCGGTTTTGA
Upstream 100 bases:
>100_bases GGCCCTGCTTCATAGCGGTGCCCGCGTGTCACCTTTTGCCTTGCGTCTTTTACTTGCGCCCCGGACAGACTGCGCCGGGG CGCTTCAGGAGTTCTGCCCG
Downstream 100 bases:
>100_bases GCGATGCTCCGCGACGGCGCAAGCGGCGATCGGCGCATGCGCCAGTGTGGTGGATGCCAGCGTGACCGGCGGGCGCCACG TCCAGTTGAGCATGCATCGC
Product: ferrichrome-iron receptor 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 714; Mature: 713
Protein sequence:
>714_residues MPVFPRRRMLHALPLLSLLACACGIACAQAAQSQARDLDAVQVRSQYTPYRALSITGATKTDASLRDLPISARVLDRTLL EDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALY GRGEPGGAVNIVTKKPLFQPQHSVDVSAGSFDSYRAAIDSTGPLSENVAYRLNVMHKDQHSFRDTVDSDRTLLAPSLLWM PAPDTTVSYELEAVRLHTPFDRGVTAIGGDANRLPASRFLGEPRDGDIDLHSTGHQVFVVHGLDQTWSLQGGATYRDSGM RGFSTEPWTLQADQRSLRRERRYRDYQGRDIAARAEVLGGFQAGRVTHNVLFGIDGNRSDDSRFQQRARSAATPYSIDVL APRYGVAQPGRLSTITDTDERQQVWGVYAQDQIDLGARWKALLGLRYDHYQQQDLDNHLRGTTQRASDGVVSPRAGMTLH VDDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLEAGLKYVQPGDGLEATVAAFRIDKKNVLSLDPADTSFSLPVGQM RSQGLELDLLGRLSPRLAASVGLAYTDSQVTRSSAAAASTGLAEGRRFPNVPRLSGNAFLNYEQPLTGKRSAALGVGVSH TGERLGSVDSNTDFVLPAYTVWRAVGHYDLSERLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGAQFRF
Sequences:
>Translated_714_residues MPVFPRRRMLHALPLLSLLACACGIACAQAAQSQARDLDAVQVRSQYTPYRALSITGATKTDASLRDLPISARVLDRTLL EDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALY GRGEPGGAVNIVTKKPLFQPQHSVDVSAGSFDSYRAAIDSTGPLSENVAYRLNVMHKDQHSFRDTVDSDRTLLAPSLLWM PAPDTTVSYELEAVRLHTPFDRGVTAIGGDANRLPASRFLGEPRDGDIDLHSTGHQVFVVHGLDQTWSLQGGATYRDSGM RGFSTEPWTLQADQRSLRRERRYRDYQGRDIAARAEVLGGFQAGRVTHNVLFGIDGNRSDDSRFQQRARSAATPYSIDVL APRYGVAQPGRLSTITDTDERQQVWGVYAQDQIDLGARWKALLGLRYDHYQQQDLDNHLRGTTQRASDGVVSPRAGMTLH VDDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLEAGLKYVQPGDGLEATVAAFRIDKKNVLSLDPADTSFSLPVGQM RSQGLELDLLGRLSPRLAASVGLAYTDSQVTRSSAAAASTGLAEGRRFPNVPRLSGNAFLNYEQPLTGKRSAALGVGVSH TGERLGSVDSNTDFVLPAYTVWRAVGHYDLSERLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGAQFRF >Mature_713_residues PVFPRRRMLHALPLLSLLACACGIACAQAAQSQARDLDAVQVRSQYTPYRALSITGATKTDASLRDLPISARVLDRTLLE DAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDPNFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYG RGEPGGAVNIVTKKPLFQPQHSVDVSAGSFDSYRAAIDSTGPLSENVAYRLNVMHKDQHSFRDTVDSDRTLLAPSLLWMP APDTTVSYELEAVRLHTPFDRGVTAIGGDANRLPASRFLGEPRDGDIDLHSTGHQVFVVHGLDQTWSLQGGATYRDSGMR GFSTEPWTLQADQRSLRRERRYRDYQGRDIAARAEVLGGFQAGRVTHNVLFGIDGNRSDDSRFQQRARSAATPYSIDVLA PRYGVAQPGRLSTITDTDERQQVWGVYAQDQIDLGARWKALLGLRYDHYQQQDLDNHLRGTTQRASDGVVSPRAGMTLHV DDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLEAGLKYVQPGDGLEATVAAFRIDKKNVLSLDPADTSFSLPVGQMR SQGLELDLLGRLSPRLAASVGLAYTDSQVTRSSAAAASTGLAEGRRFPNVPRLSGNAFLNYEQPLTGKRSAALGVGVSHT GERLGSVDSNTDFVLPAYTVWRAVGHYDLSERLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGAQFRF
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=713, Percent_Identity=24.9649368863955, Blast_Score=164, Evalue=2e-41, Organism=Escherichia coli, GI1787024, Length=783, Percent_Identity=22.7330779054917, Blast_Score=119, Evalue=8e-28, Organism=Escherichia coli, GI1787344, Length=773, Percent_Identity=23.4152652005175, Blast_Score=109, Evalue=5e-25, Organism=Escherichia coli, GI1790743, Length=317, Percent_Identity=25.2365930599369, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77668; Mature: 77537
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVFPRRRMLHALPLLSLLACACGIACAQAAQSQARDLDAVQVRSQYTPYRALSITGATK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCC TDASLRDLPISARVLDRTLLEDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDP CCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC NFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYGRGEPGGAVNIVTKKPLFQP CCCCCCEEECCCCCCCCCHHHHCCCCCCEEEEECCHHHHCCCCCCCCEEEEEECCCCCCC QHSVDVSAGSFDSYRAAIDSTGPLSENVAYRLNVMHKDQHSFRDTVDSDRTLLAPSLLWM CCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHHCCCCCEEECCEEEEE PAPDTTVSYELEAVRLHTPFDRGVTAIGGDANRLPASRFLGEPRDGDIDLHSTGHQVFVV CCCCCEEEEEEEEEEEECCHHCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCEEEEE HGLDQTWSLQGGATYRDSGMRGFSTEPWTLQADQRSLRRERRYRDYQGRDIAARAEVLGG ECCCCEEECCCCCEECCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCC FQAGRVTHNVLFGIDGNRSDDSRFQQRARSAATPYSIDVLAPRYGVAQPGRLSTITDTDE CCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCCCH RQQVWGVYAQDQIDLGARWKALLGLRYDHYQQQDLDNHLRGTTQRASDGVVSPRAGMTLH HHHHHEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE VDDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLEAGLKYVQPGDGLEATVAAFRIDK EHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHEEEEEEECC KNVLSLDPADTSFSLPVGQMRSQGLELDLLGRLSPRLAASVGLAYTDSQVTRSSAAAAST CCEEEECCCCCCCCCCHHHHHHCCCCEEEHHCCCHHHHHHHCEEECCCHHHHHHHHHHHH GLAEGRRFPNVPRLSGNAFLNYEQPLTGKRSAALGVGVSHTGERLGSVDSNTDFVLPAYT HHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHHHHCCCCCCCCEEEHHHH VWRAVGHYDLSERLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGAQFRF HHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCEEECCEECC >Mature Secondary Structure PVFPRRRMLHALPLLSLLACACGIACAQAAQSQARDLDAVQVRSQYTPYRALSITGATK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCC TDASLRDLPISARVLDRTLLEDAGVTDLAGALELASGITKANNLGGLWDSYSMRGFTGDP CCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC NFSSDYMVNGFNASRGYNGLRDAANTQSIEVIKGPASALYGRGEPGGAVNIVTKKPLFQP CCCCCCEEECCCCCCCCCHHHHCCCCCCEEEEECCHHHHCCCCCCCCEEEEEECCCCCCC QHSVDVSAGSFDSYRAAIDSTGPLSENVAYRLNVMHKDQHSFRDTVDSDRTLLAPSLLWM CCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHHCCCCCEEECCEEEEE PAPDTTVSYELEAVRLHTPFDRGVTAIGGDANRLPASRFLGEPRDGDIDLHSTGHQVFVV CCCCCEEEEEEEEEEEECCHHCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCEEEEE HGLDQTWSLQGGATYRDSGMRGFSTEPWTLQADQRSLRRERRYRDYQGRDIAARAEVLGG ECCCCEEECCCCCEECCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCC FQAGRVTHNVLFGIDGNRSDDSRFQQRARSAATPYSIDVLAPRYGVAQPGRLSTITDTDE CCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCCCH RQQVWGVYAQDQIDLGARWKALLGLRYDHYQQQDLDNHLRGTTQRASDGVVSPRAGMTLH HHHHHEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE VDDALSLYASAAAGFRPNSGVGANGQSFAPEKSRSLEAGLKYVQPGDGLEATVAAFRIDK EHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHEEEEEEECC KNVLSLDPADTSFSLPVGQMRSQGLELDLLGRLSPRLAASVGLAYTDSQVTRSSAAAAST CCEEEECCCCCCCCCCHHHHHHCCCCEEEHHCCCHHHHHHHCEEECCCHHHHHHHHHHHH GLAEGRRFPNVPRLSGNAFLNYEQPLTGKRSAALGVGVSHTGERLGSVDSNTDFVLPAYT HHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHHHHCCCCCCCCEEEHHHH VWRAVGHYDLSERLRLYAKVENLTDRRYAAFSYSEQWVYPGAPRSWTVGAQFRF HHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]