| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244471
Identifier: 21244471
GI number: 21244471
Start: 4421876
End: 4422490
Strand: Reverse
Name: 21244471
Synonym: XAC3746
Alternate gene names: NA
Gene position: 4422490-4421876 (Counterclockwise)
Preceding gene: 21244473
Following gene: 21244470
Centisome position: 85.45
GC content: 66.02
Gene sequence:
>615_bases ATGGGACTTTTCAAGATGGTGACCGCTGGGGCGGTGGGCTATGTGGCGTACAAGGCCTGGCAGCGTCGGCAGGGGCAGGC GAGCGATCCACAGGATCCACGGAGCACCACACCCACGGTGGTCGGTAGCACGCCGCCTCACGGCGACCCATTGCGCGACA GCGTGGGCGATGCCCGCGACCGCAAGCAGGCGCTTGGTGCGTTGGCAGTGTTCAACGAAAACGAGCGCACGCTTGCGCAG CTGGCGGTGGTCAAGGGTGTGGAAGGAGAGGTGCTGGCATTCGCACGCAAGATGGACGAGGCCCACAGCGCCGCGTTGAC GGATCTCAGCCGGTTTGCGCCGGATCGCAACGGTACGCTTGGTCAGGCTGCCGGAGCGGGCGCCGAAGGCATGCGCAAGC GCCTGCAGGAGCTGCATGGGCAGCAGTTTGAATCGCACTATCTGCAAGCCAGCGTGGACAGCCACGAGCAGGCGTTGGCC CTGCTCGACACACAGCTGAGCAGCGAGCCGGGCTCCAGCGACCTGGGCAAAGAGTTGCAGCGCGCACGCGACACCATTGC CGAGCATCTGGAACATGCAAAGGCGCTGCGCGCCAAGCAGGGCCGGCCCCACTGA
Upstream 100 bases:
>100_bases CGCGCTGGGACGCAGGGCATGCGGCTTGCGCAATCCATGCGAACCCAACAATCAATGACCGCCAGATGCGATGCAAGATC GCAATCAACAGGAGACAGCA
Downstream 100 bases:
>100_bases CCGCAGGTCGCCAGGCAACGCGTCGATACTGCGGCTCTGGCAAGCGTGCGAGCCGCCGGAGTCGCAGCCGGCCACCCGTT GTCCTACACGGGAGATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MGLFKMVTAGAVGYVAYKAWQRRQGQASDPQDPRSTTPTVVGSTPPHGDPLRDSVGDARDRKQALGALAVFNENERTLAQ LAVVKGVEGEVLAFARKMDEAHSAALTDLSRFAPDRNGTLGQAAGAGAEGMRKRLQELHGQQFESHYLQASVDSHEQALA LLDTQLSSEPGSSDLGKELQRARDTIAEHLEHAKALRAKQGRPH
Sequences:
>Translated_204_residues MGLFKMVTAGAVGYVAYKAWQRRQGQASDPQDPRSTTPTVVGSTPPHGDPLRDSVGDARDRKQALGALAVFNENERTLAQ LAVVKGVEGEVLAFARKMDEAHSAALTDLSRFAPDRNGTLGQAAGAGAEGMRKRLQELHGQQFESHYLQASVDSHEQALA LLDTQLSSEPGSSDLGKELQRARDTIAEHLEHAKALRAKQGRPH >Mature_203_residues GLFKMVTAGAVGYVAYKAWQRRQGQASDPQDPRSTTPTVVGSTPPHGDPLRDSVGDARDRKQALGALAVFNENERTLAQL AVVKGVEGEVLAFARKMDEAHSAALTDLSRFAPDRNGTLGQAAGAGAEGMRKRLQELHGQQFESHYLQASVDSHEQALAL LDTQLSSEPGSSDLGKELQRARDTIAEHLEHAKALRAKQGRPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21985; Mature: 21854
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFKMVTAGAVGYVAYKAWQRRQGQASDPQDPRSTTPTVVGSTPPHGDPLRDSVGDARD CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHCCHHH RKQALGALAVFNENERTLAQLAVVKGVEGEVLAFARKMDEAHSAALTDLSRFAPDRNGTL HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GQAAGAGAEGMRKRLQELHGQQFESHYLQASVDSHEQALALLDTQLSSEPGSSDLGKELQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHH RARDTIAEHLEHAKALRAKQGRPH HHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GLFKMVTAGAVGYVAYKAWQRRQGQASDPQDPRSTTPTVVGSTPPHGDPLRDSVGDARD CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHCCHHH RKQALGALAVFNENERTLAQLAVVKGVEGEVLAFARKMDEAHSAALTDLSRFAPDRNGTL HHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GQAAGAGAEGMRKRLQELHGQQFESHYLQASVDSHEQALALLDTQLSSEPGSSDLGKELQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHH RARDTIAEHLEHAKALRAKQGRPH HHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA