| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is exsF
Identifier: 21244456
GI number: 21244456
Start: 4406769
End: 4407149
Strand: Direct
Name: exsF
Synonym: XAC3731
Alternate gene names: NA
Gene position: 4406769-4407149 (Clockwise)
Preceding gene: 21244454
Following gene: 21244459
Centisome position: 85.15
GC content: 63.25
Gene sequence:
>381_bases ATGCACGACACTGCACTCGCCGGCCGCCGCATTCTTGTTGTCGAGGACGATTACTTGCTGGCCGAAGCGCTCAACGACTT GTTGGTGGAAGCCGGCGTCAACGTGGTGGGACCGGTCGGCAATGTGCCCGACGCGCTCTCGCTGGTGGCGTCGGGTCAGG CCATCGATGGCGCCTTGCTGGATGTCAACGTGCGCGGCCAGGCGGTGTTTCCGGTCGCCGATGCATTGATGAAGCGCGGC GTGCCGTTCTCCTTCTGCTCCGGCTACGGCCGCTATACGCTGCCGCAGCGCTTTGCGCATCTGTCGTACTGCATGAAGCC CTATAACCCGCGCACGATCGCCAGCTTGCTCAGCCACCAGAGCGAGACGGTCAATCACTGA
Upstream 100 bases:
>100_bases CTGCTTGCGCGCCGCGTTAACCTGCAGTGCGAGCACCATGCTTGCGCGCGTTGCCTGAAACGCCACCGCTCTGGAGCCTG TCATGCACGACACTGCACTC
Downstream 100 bases:
>100_bases TCGGCGCAGGCGGGCTGACCGTTATCGCCCGGTTCCACGCCGGGCTGCTGCAGGGCGCGCTCTTGCTCGCCGAGCTGATT GAGCAGTTCGACAGCGGCCT
Product: regulatory protein
Products: NA
Alternate protein names: Response Regulator Receiver; Two-Component Response Regulator; Signal Transduction Histidine Kinase; Two-Component System Regulatory Protein; Regulatory Protein; Response Regulator Receiver Domain-Containing Protein; Response Regulator; Response Regulator Recevier Domain Protein; Two-Component Receiver Domain-Containing Protein; Crp/Fnr Family Transcriptional Regulator; CheY-Like Response Regulator; Two-Component System Response Regulator; Two-Component Response Regulator Protein; Response Regulator Receiver And SARP Domain Protein; Two Component Response Regulator
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MHDTALAGRRILVVEDDYLLAEALNDLLVEAGVNVVGPVGNVPDALSLVASGQAIDGALLDVNVRGQAVFPVADALMKRG VPFSFCSGYGRYTLPQRFAHLSYCMKPYNPRTIASLLSHQSETVNH
Sequences:
>Translated_126_residues MHDTALAGRRILVVEDDYLLAEALNDLLVEAGVNVVGPVGNVPDALSLVASGQAIDGALLDVNVRGQAVFPVADALMKRG VPFSFCSGYGRYTLPQRFAHLSYCMKPYNPRTIASLLSHQSETVNH >Mature_126_residues MHDTALAGRRILVVEDDYLLAEALNDLLVEAGVNVVGPVGNVPDALSLVASGQAIDGALLDVNVRGQAVFPVADALMKRG VPFSFCSGYGRYTLPQRFAHLSYCMKPYNPRTIASLLSHQSETVNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13539; Mature: 13539
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDTALAGRRILVVEDDYLLAEALNDLLVEAGVNVVGPVGNVPDALSLVASGQAIDGALL CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHCCCCCCCEEE DVNVRGQAVFPVADALMKRGVPFSFCSGYGRYTLPQRFAHLSYCMKPYNPRTIASLLSHQ EEECCCCEEHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH SETVNH HHCCCC >Mature Secondary Structure MHDTALAGRRILVVEDDYLLAEALNDLLVEAGVNVVGPVGNVPDALSLVASGQAIDGALL CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHCCCCCCCEEE DVNVRGQAVFPVADALMKRGVPFSFCSGYGRYTLPQRFAHLSYCMKPYNPRTIASLLSHQ EEECCCCEEHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH SETVNH HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA