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The map label for this gene is 21244429

Identifier: 21244429

GI number: 21244429

Start: 4379459

End: 4380895

Strand: Reverse

Name: 21244429

Synonym: XAC3704

Alternate gene names: NA

Gene position: 4380895-4379459 (Counterclockwise)

Preceding gene: 21244430

Following gene: 77748737

Centisome position: 84.65

GC content: 65.27

Gene sequence:

>1437_bases
ATGTTCAGCGCCGAGGTGGAACCCGCGTGGAGTTTTGAAGCATGGCGTGCGTTGGCGCGGGCAGGCTGGTGCGCGCAGGT
GGAGCCGGACGATGTGGCCTGGAATGGCGGGGCGCAGGGCGGCTTGTTGATGGGGCAGGGACTGTTGGCGATGCCGGCCG
TGGTGCCACCACCGCGGGTCTCTGCGGATTTCATGCAACTGGCGGCCTCGGTGCTGTGTCACCGCGACCCGCAACGGCAC
GCCGTGTTGTATCGCTTGCTGTGGCGGGTTGCCTCTGGGGAAAAAGCCCTGCTGGAACGCGCCACCGATGTGGATGTGCA
CCGGCTACGGCAATGGCAAAAAGCGGTGCAGCGCGATACCCACAAAATGAAGGCCTTCGTGCGCTTTCGTCGCCTGCCCG
GGGAAGAAGAAGACTTCATGTCCTGGTTCGAGCCCGAGCACTGGATCGTGGATCGCGTGGCGCCGTTTTTTGCGCGCCGG
TTTGCCGGCATGCGTTGGGCGATCCTGACCCCGTACCGCAGTGTGCGTTGGGATGGGCAGGCGTTGACCTTCGGCGAAGG
TGCGGTGCGCACCCAGGTACCCGCCGACGATGCGCAGGAGACGCTCTGGCGCACGTACTACGCGCATATCTTCAACCCGG
CGCGGCTCAACCCGACCATGATGCGGCAGGAAATGCCGCAGAAATACTGGAAGAACTTGCCCGAAGCCACGCTGTTGCCG
GAGCTGATCCGCGATGCCGGCATGCGTGTTCGCGAGATGGCCGAGCGCGCGCCCGAGCCGGTACGGCGACGGGTGCCGGC
AGCGCCTGCGCCATTGCCGGAAGCGGCAACCCAAAGCCTGGCGCAGTTGCGCACTGCCGCACGCGATTGCCGGCGTTGCG
AACTGTGGCAGCCGGCAACGCAAACGGTGTTCGGCGAAGGATCCGACGATGCGTCGGTCATGGTGATCGGCGAGCAGCCG
GGCGATGAAGAGGACTTGAGCGGTCGTCCGTTTGTCGGGCCCGCCGGGCGCCTGTTCAACATGGCGTTAGGCGAGCTGGG
TGTGGACCGCGAGACGTTCTACGTCACCAATGCGGTCAAGCATTTTCGTTTCGAGCAACGCGGCAAACGGCGGCTGCATC
GCAATCCGGAGCGCACCCATGTGCAGGCCTGCAGCGGGTGGTTGCAGGCCGAACGGGCGCACTTGCGTCCGGCGCAGATC
GTCTGCCTGGGCGCGACTGCGGCGCAAGCCGTGTTGGGAAGCCGCTTCCGATTGATGCAGCAACGCGGGCAATGGCAGCG
CCTGGACGACGGCACGCCTGTATTGACCACGGTGCACCCGTCCTGGGTATTGCGCCAGCCATCGACGGATGCGCGCGAAG
AAGGGTATCGCGGATTTGTCGAGGATCTCCGTCAGTTGCTGGATCCACCGCCGCCGTCCAGCGATCAGTCGAGATAG

Upstream 100 bases:

>100_bases
GACCTCGCCAACGCAGGTAGCGTGCATCCTGGTAAACGGCATTGCGCGGGCATACGGTTCCAAAGCGCATGTCGGTACCC
CTACAAGAGCAAGGCAAACG

Downstream 100 bases:

>100_bases
GAAATAGCGCGCCACACGGGCAAAAAAAGACGCGTGCAAGGGCACGCGCACGGTGTCGGAGAATCGGGACACCAAGCGGA
GCCACCGGCAGGCCGGTCAC

Product: DNA polymerase-like protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; DNA Polymerase Bacteriophage-Type; DNA Polymerase; DNA-Directed DNA Polymerase Protein; DNA-Directed DNA Polymerase; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein; Helicase/Glycosylase; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Phage Related DNA Polymerase; DNA Glycosylase; Phage SpO1 DNA Polymerase-Related Protein; Uracil DNA Glycosylase Protein; Bacteriophage-Related DNA Polymerase; Uracil DNA Glycosylase; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily; Phage Shock Protein E; Phage DNA Polymerase; Phage SPO1 DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil DNA Glycosylase Family Protein; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein; Leucyl-TRNA Synthetase

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MFSAEVEPAWSFEAWRALARAGWCAQVEPDDVAWNGGAQGGLLMGQGLLAMPAVVPPPRVSADFMQLAASVLCHRDPQRH
AVLYRLLWRVASGEKALLERATDVDVHRLRQWQKAVQRDTHKMKAFVRFRRLPGEEEDFMSWFEPEHWIVDRVAPFFARR
FAGMRWAILTPYRSVRWDGQALTFGEGAVRTQVPADDAQETLWRTYYAHIFNPARLNPTMMRQEMPQKYWKNLPEATLLP
ELIRDAGMRVREMAERAPEPVRRRVPAAPAPLPEAATQSLAQLRTAARDCRRCELWQPATQTVFGEGSDDASVMVIGEQP
GDEEDLSGRPFVGPAGRLFNMALGELGVDRETFYVTNAVKHFRFEQRGKRRLHRNPERTHVQACSGWLQAERAHLRPAQI
VCLGATAAQAVLGSRFRLMQQRGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQLLDPPPPSSDQSR

Sequences:

>Translated_478_residues
MFSAEVEPAWSFEAWRALARAGWCAQVEPDDVAWNGGAQGGLLMGQGLLAMPAVVPPPRVSADFMQLAASVLCHRDPQRH
AVLYRLLWRVASGEKALLERATDVDVHRLRQWQKAVQRDTHKMKAFVRFRRLPGEEEDFMSWFEPEHWIVDRVAPFFARR
FAGMRWAILTPYRSVRWDGQALTFGEGAVRTQVPADDAQETLWRTYYAHIFNPARLNPTMMRQEMPQKYWKNLPEATLLP
ELIRDAGMRVREMAERAPEPVRRRVPAAPAPLPEAATQSLAQLRTAARDCRRCELWQPATQTVFGEGSDDASVMVIGEQP
GDEEDLSGRPFVGPAGRLFNMALGELGVDRETFYVTNAVKHFRFEQRGKRRLHRNPERTHVQACSGWLQAERAHLRPAQI
VCLGATAAQAVLGSRFRLMQQRGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQLLDPPPPSSDQSR
>Mature_478_residues
MFSAEVEPAWSFEAWRALARAGWCAQVEPDDVAWNGGAQGGLLMGQGLLAMPAVVPPPRVSADFMQLAASVLCHRDPQRH
AVLYRLLWRVASGEKALLERATDVDVHRLRQWQKAVQRDTHKMKAFVRFRRLPGEEEDFMSWFEPEHWIVDRVAPFFARR
FAGMRWAILTPYRSVRWDGQALTFGEGAVRTQVPADDAQETLWRTYYAHIFNPARLNPTMMRQEMPQKYWKNLPEATLLP
ELIRDAGMRVREMAERAPEPVRRRVPAAPAPLPEAATQSLAQLRTAARDCRRCELWQPATQTVFGEGSDDASVMVIGEQP
GDEEDLSGRPFVGPAGRLFNMALGELGVDRETFYVTNAVKHFRFEQRGKRRLHRNPERTHVQACSGWLQAERAHLRPAQI
VCLGATAAQAVLGSRFRLMQQRGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQLLDPPPPSSDQSR

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 54413; Mature: 54413

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSAEVEPAWSFEAWRALARAGWCAQVEPDDVAWNGGAQGGLLMGQGLLAMPAVVPPPRV
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCC
SADFMQLAASVLCHRDPQRHAVLYRLLWRVASGEKALLERATDVDVHRLRQWQKAVQRDT
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
HKMKAFVRFRRLPGEEEDFMSWFEPEHWIVDRVAPFFARRFAGMRWAILTPYRSVRWDGQ
HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCC
ALTFGEGAVRTQVPADDAQETLWRTYYAHIFNPARLNPTMMRQEMPQKYWKNLPEATLLP
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
ELIRDAGMRVREMAERAPEPVRRRVPAAPAPLPEAATQSLAQLRTAARDCRRCELWQPAT
HHHHHHCHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
QTVFGEGSDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGELGVDRETFYVTNAVK
HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
HFRFEQRGKRRLHRNPERTHVQACSGWLQAERAHLRPAQIVCLGATAAQAVLGSRFRLMQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH
QRGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQLLDPPPPSSDQSR
HCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MFSAEVEPAWSFEAWRALARAGWCAQVEPDDVAWNGGAQGGLLMGQGLLAMPAVVPPPRV
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCC
SADFMQLAASVLCHRDPQRHAVLYRLLWRVASGEKALLERATDVDVHRLRQWQKAVQRDT
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
HKMKAFVRFRRLPGEEEDFMSWFEPEHWIVDRVAPFFARRFAGMRWAILTPYRSVRWDGQ
HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCC
ALTFGEGAVRTQVPADDAQETLWRTYYAHIFNPARLNPTMMRQEMPQKYWKNLPEATLLP
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
ELIRDAGMRVREMAERAPEPVRRRVPAAPAPLPEAATQSLAQLRTAARDCRRCELWQPAT
HHHHHHCHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
QTVFGEGSDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGELGVDRETFYVTNAVK
HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
HFRFEQRGKRRLHRNPERTHVQACSGWLQAERAHLRPAQIVCLGATAAQAVLGSRFRLMQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH
QRGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQLLDPPPPSSDQSR
HCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA