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The map label for this gene is 21244388

Identifier: 21244388

GI number: 21244388

Start: 4341658

End: 4342179

Strand: Reverse

Name: 21244388

Synonym: XAC3663

Alternate gene names: NA

Gene position: 4342179-4341658 (Counterclockwise)

Preceding gene: 77748736

Following gene: 77748735

Centisome position: 83.9

GC content: 65.33

Gene sequence:

>522_bases
GTGACGGAAAAACACCTCAGCCGAGGCTTGCCAGCGCACATTCGCAGCGATTGCAGGGTGTTGCTGCTTGGTTCGATGCC
CGGTGTCGCATCACTGGAAGCCGCGCGTTACTACGCGCATCCACGCAATCGTTTCTGGCCGCTGATGCATGCCCTTTTGG
GCATTGATACAGCCGCAAGCTATGCACTGCGCTTGCATGCATTGCTCGACCATCGCGTGGGCCTGTGGGATGTCATCGGC
CAATGCGAGCGGCGTGGCAGTCTGGATACGTCCATTGTGGCGGCGAGCATCGTGGTCAATCCGCTGCCCGCGTTGCTGGC
TACGCTGCCGCAGCTGCGCATGGTGGCCTGCAATGGCACTGCGGCAGCACAGGCCTGGCGCCGGCACGTCCAGCCGCTGC
TATCGGCGCAGCGTTGCGCGCTGCCAGTCGTCGCGTTGCCATCCACCAGCCCGGCCAATGCCGCCTGGTCGCTGCCGCGG
CTGGCGGCAGCCTGGCAACCCCTGTGCGACGCGGTGCGCTAG

Upstream 100 bases:

>100_bases
CCTGTGGCCCGCTAAAATTTCGTTTGTTCAGGAATTACCCCAAGAAGGCCGCCGTTACGTCATGCAGTCTGAAAAAGACA
TTCACGCAGATGCGATTGCC

Downstream 100 bases:

>100_bases
CCGAGGTGACACGACGCGAGGTCGGTGTGGAATGCGAGCGTCGCAGCGAACCACGCCGCCGTCGCGGTGCCGCGCACTGA
TGGTTGATGCACGCCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; T/U Mismatch-Specific DNA Glycosylase; Mug GT/U Mismatch-Specific DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein; G/U Mismatch-Specific DNA Glycosylase; DNA Glycosylase; G/U Mismatch-Specific Uracil-DNA Glycosylase; G-T/U Mismatch-Specific DNA Glycosylase-Like; Uracil DNA Glycosylase Superfamily; YjeF-Like Protein; GT/U Mismatch-Specific Uracil/Thymine DNA-Glycosylase

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTEKHLSRGLPAHIRSDCRVLLLGSMPGVASLEAARYYAHPRNRFWPLMHALLGIDTAASYALRLHALLDHRVGLWDVIG
QCERRGSLDTSIVAASIVVNPLPALLATLPQLRMVACNGTAAAQAWRRHVQPLLSAQRCALPVVALPSTSPANAAWSLPR
LAAAWQPLCDAVR

Sequences:

>Translated_173_residues
MTEKHLSRGLPAHIRSDCRVLLLGSMPGVASLEAARYYAHPRNRFWPLMHALLGIDTAASYALRLHALLDHRVGLWDVIG
QCERRGSLDTSIVAASIVVNPLPALLATLPQLRMVACNGTAAAQAWRRHVQPLLSAQRCALPVVALPSTSPANAAWSLPR
LAAAWQPLCDAVR
>Mature_172_residues
TEKHLSRGLPAHIRSDCRVLLLGSMPGVASLEAARYYAHPRNRFWPLMHALLGIDTAASYALRLHALLDHRVGLWDVIGQ
CERRGSLDTSIVAASIVVNPLPALLATLPQLRMVACNGTAAAQAWRRHVQPLLSAQRCALPVVALPSTSPANAAWSLPRL
AAAWQPLCDAVR

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18759; Mature: 18628

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKHLSRGLPAHIRSDCRVLLLGSMPGVASLEAARYYAHPRNRFWPLMHALLGIDTAAS
CCHHHHHCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
YALRLHALLDHRVGLWDVIGQCERRGSLDTSIVAASIVVNPLPALLATLPQLRMVACNGT
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHEEECCCH
AAAQAWRRHVQPLLSAQRCALPVVALPSTSPANAAWSLPRLAAAWQPLCDAVR
HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEKHLSRGLPAHIRSDCRVLLLGSMPGVASLEAARYYAHPRNRFWPLMHALLGIDTAAS
CHHHHHCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
YALRLHALLDHRVGLWDVIGQCERRGSLDTSIVAASIVVNPLPALLATLPQLRMVACNGT
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHEEECCCH
AAAQAWRRHVQPLLSAQRCALPVVALPSTSPANAAWSLPRLAAAWQPLCDAVR
HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA