| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244360
Identifier: 21244360
GI number: 21244360
Start: 4311374
End: 4312513
Strand: Reverse
Name: 21244360
Synonym: XAC3635
Alternate gene names: NA
Gene position: 4312513-4311374 (Counterclockwise)
Preceding gene: 21244361
Following gene: 21244353
Centisome position: 83.32
GC content: 61.49
Gene sequence:
>1140_bases ATGAAGACGTGTATCGCGGCGGTGCTGTTGGCATTGCCGGGGCTTGCTGTTGCCCAAGACGTGCCGCTGGGCTATGCCGG CCAGGGCGGAATGACGCTGCAGGAGATCGACCCTGCCATTTATGCGTATCACTACGACCACGGATTCGTGGGCGAAGATG CGATGGGCTGGGATCCTGCGCTGCAGTTCGCCTGGTCGCGCATCGCAGCCGCCAAGGTCTGTGCACAGCAATCGCCCTCC GATGCGTTGATCGGCAAGCTGGTGGAACAGTACGGCAAGGATGCCGTCGTGCACCAGATCAACGGCATTGGCTTCCATGA AGCACAGATGCGGGCGGCTGGCACGTTCTGTACCTCTGCGCGCATGACCGAAGCCACGGCGGTGGTGCCTGCGTTTGCAA GCGGGGATTTCTCCGCGGCAACTGCGTATGCGGCTGCTGCAGTTGCAGGCACTGTGTCGGTCGCCGCAACAGACGCGCAA CCAAATCCGCAGTCCGATGCAGGGGCTGTCATGACGCCCTCGGCAGATTGGGCCTTGCAACTCCCATTGCATTCCAGCAT GCGCGTGGGCTCGAACGGCTTGCCCAACGGCGACGAGATGCTACGTGTCGTCCGCCGCGGACATACCGGGATGGTCGTCG GCTTGCAAATCGCTACCAGCCTGTTTGCGCGCGGTGTTGCGGTCTCTGCCTTCGGAAAGGATCAGCTGAAAGGCGAAAAG ATGGAAGGCCTGGGGAATCCTGGCTATCGATTGCAGCGCGATGCGGTCAACGCGCATTTGAAGACCTACTTCACTGGGCA TCCGGGGGCCGTGCCGGTAGAACCGTTCCCGTTGCAGGTGCTGATGTCGGACTGGCTGCTGGTCTATCAGAGCCTGGCCG ATACCAAGTCGCCTTACGAGCTGCGCTACGCAGTGACGATCGGTGGGGAGCGCAGCGGCTTTTTGAAGCGCAAGGCGAGC CCGGTCAGTCTGGACTGTGCGCCGACACCGCGCACTGCCTCGCTGGAAGAATGGGAAGCCAACGATTACGCATTGGTCAA GCAAGCAGCACAGGCCTATAGCGACGAATGTGCAGCGAAATTCGCCGAGCAGTTGCCGCAGTGGTTCCCTGACAGAGCGG CTGTTGCGACGTCCAACTGA
Upstream 100 bases:
>100_bases TCCTGCAGGTTGGAAGCCGTCGTGTGCGAGCGGTGACGCATCGGTCGCGCTGCATGGGGGACATGCAGCGCGGCGTACTT ATCCATAGGGACAGGGATTC
Downstream 100 bases:
>100_bases CGGATCACCCCTGTTGACGCCGGATATCCGGCGCTCGATGTGATTCGAAAAAACAAGCAATGCAGGCGTAACCCGAAGGG GCGCCGATCCATCGATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MKTCIAAVLLALPGLAVAQDVPLGYAGQGGMTLQEIDPAIYAYHYDHGFVGEDAMGWDPALQFAWSRIAAAKVCAQQSPS DALIGKLVEQYGKDAVVHQINGIGFHEAQMRAAGTFCTSARMTEATAVVPAFASGDFSAATAYAAAAVAGTVSVAATDAQ PNPQSDAGAVMTPSADWALQLPLHSSMRVGSNGLPNGDEMLRVVRRGHTGMVVGLQIATSLFARGVAVSAFGKDQLKGEK MEGLGNPGYRLQRDAVNAHLKTYFTGHPGAVPVEPFPLQVLMSDWLLVYQSLADTKSPYELRYAVTIGGERSGFLKRKAS PVSLDCAPTPRTASLEEWEANDYALVKQAAQAYSDECAAKFAEQLPQWFPDRAAVATSN
Sequences:
>Translated_379_residues MKTCIAAVLLALPGLAVAQDVPLGYAGQGGMTLQEIDPAIYAYHYDHGFVGEDAMGWDPALQFAWSRIAAAKVCAQQSPS DALIGKLVEQYGKDAVVHQINGIGFHEAQMRAAGTFCTSARMTEATAVVPAFASGDFSAATAYAAAAVAGTVSVAATDAQ PNPQSDAGAVMTPSADWALQLPLHSSMRVGSNGLPNGDEMLRVVRRGHTGMVVGLQIATSLFARGVAVSAFGKDQLKGEK MEGLGNPGYRLQRDAVNAHLKTYFTGHPGAVPVEPFPLQVLMSDWLLVYQSLADTKSPYELRYAVTIGGERSGFLKRKAS PVSLDCAPTPRTASLEEWEANDYALVKQAAQAYSDECAAKFAEQLPQWFPDRAAVATSN >Mature_379_residues MKTCIAAVLLALPGLAVAQDVPLGYAGQGGMTLQEIDPAIYAYHYDHGFVGEDAMGWDPALQFAWSRIAAAKVCAQQSPS DALIGKLVEQYGKDAVVHQINGIGFHEAQMRAAGTFCTSARMTEATAVVPAFASGDFSAATAYAAAAVAGTVSVAATDAQ PNPQSDAGAVMTPSADWALQLPLHSSMRVGSNGLPNGDEMLRVVRRGHTGMVVGLQIATSLFARGVAVSAFGKDQLKGEK MEGLGNPGYRLQRDAVNAHLKTYFTGHPGAVPVEPFPLQVLMSDWLLVYQSLADTKSPYELRYAVTIGGERSGFLKRKAS PVSLDCAPTPRTASLEEWEANDYALVKQAAQAYSDECAAKFAEQLPQWFPDRAAVATSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40128; Mature: 40128
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTCIAAVLLALPGLAVAQDVPLGYAGQGGMTLQEIDPAIYAYHYDHGFVGEDAMGWDPA CHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCHH LQFAWSRIAAAKVCAQQSPSDALIGKLVEQYGKDAVVHQINGIGFHEAQMRAAGTFCTSA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEHHHCCCCCHHHHHHHHHHHHHCC RMTEATAVVPAFASGDFSAATAYAAAAVAGTVSVAATDAQPNPQSDAGAVMTPSADWALQ HHHHHHEEEEEECCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEECCCCCCEEE LPLHSSMRVGSNGLPNGDEMLRVVRRGHTGMVVGLQIATSLFARGVAVSAFGKDQLKGEK CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCEEEECCCHHHCCCH MEGLGNPGYRLQRDAVNAHLKTYFTGHPGAVPVEPFPLQVLMSDWLLVYQSLADTKSPYE HHCCCCCCCEEEHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE LRYAVTIGGERSGFLKRKASPVSLDCAPTPRTASLEEWEANDYALVKQAAQAYSDECAAK EEEEEEECCCCCCHHHCCCCCCEEECCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHH FAEQLPQWFPDRAAVATSN HHHHHHHHCCCCCCEECCC >Mature Secondary Structure MKTCIAAVLLALPGLAVAQDVPLGYAGQGGMTLQEIDPAIYAYHYDHGFVGEDAMGWDPA CHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCHH LQFAWSRIAAAKVCAQQSPSDALIGKLVEQYGKDAVVHQINGIGFHEAQMRAAGTFCTSA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEHHHCCCCCHHHHHHHHHHHHHCC RMTEATAVVPAFASGDFSAATAYAAAAVAGTVSVAATDAQPNPQSDAGAVMTPSADWALQ HHHHHHEEEEEECCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEECCCCCCEEE LPLHSSMRVGSNGLPNGDEMLRVVRRGHTGMVVGLQIATSLFARGVAVSAFGKDQLKGEK CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCEEEECCCHHHCCCH MEGLGNPGYRLQRDAVNAHLKTYFTGHPGAVPVEPFPLQVLMSDWLLVYQSLADTKSPYE HHCCCCCCCEEEHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCE LRYAVTIGGERSGFLKRKASPVSLDCAPTPRTASLEEWEANDYALVKQAAQAYSDECAAK EEEEEEECCCCCCHHHCCCCCCEEECCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHH FAEQLPQWFPDRAAVATSN HHHHHHHHCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA