| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244348
Identifier: 21244348
GI number: 21244348
Start: 4297439
End: 4297855
Strand: Reverse
Name: 21244348
Synonym: XAC3624
Alternate gene names: NA
Gene position: 4297855-4297439 (Counterclockwise)
Preceding gene: 21244351
Following gene: 21244347
Centisome position: 83.04
GC content: 61.15
Gene sequence:
>417_bases TTGACGAGTCATGACGAACGTTTCCTGCAAAGGAGCGAAAGGCGAGGCCGGGAAGGGTGCATGAGGTCGCGCGGTTCAAT CAAACGTTTTATCCGTACGCATGCGTGCTGTTTTCCGCTGACTGCGCAGCGCGCAGATACGCTGCTGCATGCCACATCAC AGCGCTCGGGCCTGCGGTCGATGCGTGCGTGCAGGCCCGCGTTGTCGGCTTTGCACGCGCTGTCGTCGGATGCGCAACCG TTGGTGTTCGGCGCGCGCTCGTGCTCGCTTTACGAATGCGCGGTGATGTCCCTCGACGCAAGATGTGAGACGGCGCTGGC TTATCATGGGCGCAGACCTGCGACAGAGAATCCGCTTGATGCGCAAGATCGTGCACGTGGACATGGATGCGTTCTACGCG TCCGTGGAGCAGCGTGA
Upstream 100 bases:
>100_bases GGTCGAACATCAGCATCGGATCATTGGGCAGACGGCCACTGTCGGGCGCAAACAATTCCCCACGCGCGCTGGCCAGCAAT TGGTCACGCGAGTACGTACT
Downstream 100 bases:
>100_bases CGACCCTAGCCTGCGTGGCAAGCCGGTGGTGGTGGCCTGGCGCGGTGCGCGTTCGGTGGTGTGCGCGGCCTCCTACGAAG CGCGGATCTTCGGCATTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTSHDERFLQRSERRGREGCMRSRGSIKRFIRTHACCFPLTAQRADTLLHATSQRSGLRSMRACRPALSALHALSSDAQP LVFGARSCSLYECAVMSLDARCETALAYHGRRPATENPLDAQDRARGHGCVLRVRGAA
Sequences:
>Translated_138_residues MTSHDERFLQRSERRGREGCMRSRGSIKRFIRTHACCFPLTAQRADTLLHATSQRSGLRSMRACRPALSALHALSSDAQP LVFGARSCSLYECAVMSLDARCETALAYHGRRPATENPLDAQDRARGHGCVLRVRGAA >Mature_137_residues TSHDERFLQRSERRGREGCMRSRGSIKRFIRTHACCFPLTAQRADTLLHATSQRSGLRSMRACRPALSALHALSSDAQPL VFGARSCSLYECAVMSLDARCETALAYHGRRPATENPLDAQDRARGHGCVLRVRGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15287; Mature: 15155
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSHDERFLQRSERRGREGCMRSRGSIKRFIRTHACCFPLTAQRADTLLHATSQRSGLRS CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH MRACRPALSALHALSSDAQPLVFGARSCSLYECAVMSLDARCETALAYHGRRPATENPLD HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCC AQDRARGHGCVLRVRGAA CHHHCCCCCEEEEECCCC >Mature Secondary Structure TSHDERFLQRSERRGREGCMRSRGSIKRFIRTHACCFPLTAQRADTLLHATSQRSGLRS CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH MRACRPALSALHALSSDAQPLVFGARSCSLYECAVMSLDARCETALAYHGRRPATENPLD HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCC AQDRARGHGCVLRVRGAA CHHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA