| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is uptB [H]
Identifier: 21244333
GI number: 21244333
Start: 4280013
End: 4280675
Strand: Reverse
Name: uptB [H]
Synonym: XAC3608
Alternate gene names: 21244333
Gene position: 4280675-4280013 (Counterclockwise)
Preceding gene: 77748733
Following gene: 21244331
Centisome position: 82.71
GC content: 68.48
Gene sequence:
>663_bases ATGAGCGCGGCCCTGGAGCTGTTTTCGTACTGGCGTTCGAGCGCGGCCTATCGCGTGCGCATCGGTCTGGGGCTGAAGGC GCTGGACTACATCGCCCAGCCGGTGCATCTGGTGCGTGACGGGGGCGAGCAGCACGCGCCGGCCTATGCGCAACTCAATC CGCAGGAACTGGTGCCGACGTTGCGGCATGGCGATGTGGTGATCGCACAGTCGCTAGCGATTCTGGAGTATCTGGAAGAG GCATTCGCGGACACCGCGGCGCTGCTGCCGCGCGCGCCTGCCGAACGCGCCCGGGTGCGCGCACTGGCGCAGCTCATCGC CTGCGATGTGCACCCGCTCAACAACCTGCGCGTCATGCAGGTGCTGGAGCGCGAGTTCGCGCTGGATGGCGCACGACGCC AGCAGTGGACACGGCGCTGGATGGAGCGTGGCTTTGCGGCACTGGAAACGCAGCTGGCGCGCGATGCGCAGACCGGGCGC TTCTGCCACGGCGATGCACCGGGCCTGGCCGATTGCGTGCTGATTCCGCAGCTCTACAACGCGCGCCGGTTCGAGGTGGA TCTGGCGCCATATCCGACCCTGCGGCGCATCGAGCAGGCCTGCCTGCAGTTGCCGGCCTTCGATGCGGCGCGCCCGGAGA TGCAGGCCGACGCGGTGGCCTGA
Upstream 100 bases:
>100_bases TTCGATGCCAGCGGCGCCAGCATCTTCGGTGCGATCGAACAGCGCGTCGAGCGGCAGCCGCTGCCATGACCTGCGGTGCA GCGACGGCGGGCGGTCGCGC
Downstream 100 bases:
>100_bases GGGACGCTGTCACAGCCCTCATCCGCCCTTCGGGCACCTTCTCCCGTCACACGGGAGAAGGGCAGGCGGGCACTCATCCG GTTCGGGCTGTTGGCGCCAC
Product: maleylacetoacetate isomerase
Products: NA
Alternate protein names: MAAI [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSAALELFSYWRSSAAYRVRIGLGLKALDYIAQPVHLVRDGGEQHAPAYAQLNPQELVPTLRHGDVVIAQSLAILEYLEE AFADTAALLPRAPAERARVRALAQLIACDVHPLNNLRVMQVLEREFALDGARRQQWTRRWMERGFAALETQLARDAQTGR FCHGDAPGLADCVLIPQLYNARRFEVDLAPYPTLRRIEQACLQLPAFDAARPEMQADAVA
Sequences:
>Translated_220_residues MSAALELFSYWRSSAAYRVRIGLGLKALDYIAQPVHLVRDGGEQHAPAYAQLNPQELVPTLRHGDVVIAQSLAILEYLEE AFADTAALLPRAPAERARVRALAQLIACDVHPLNNLRVMQVLEREFALDGARRQQWTRRWMERGFAALETQLARDAQTGR FCHGDAPGLADCVLIPQLYNARRFEVDLAPYPTLRRIEQACLQLPAFDAARPEMQADAVA >Mature_219_residues SAALELFSYWRSSAAYRVRIGLGLKALDYIAQPVHLVRDGGEQHAPAYAQLNPQELVPTLRHGDVVIAQSLAILEYLEEA FADTAALLPRAPAERARVRALAQLIACDVHPLNNLRVMQVLEREFALDGARRQQWTRRWMERGFAALETQLARDAQTGRF CHGDAPGLADCVLIPQLYNARRFEVDLAPYPTLRRIEQACLQLPAFDAARPEMQADAVA
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI22202624, Length=212, Percent_Identity=44.3396226415094, Blast_Score=173, Evalue=1e-43, Organism=Homo sapiens, GI22202622, Length=161, Percent_Identity=43.4782608695652, Blast_Score=118, Evalue=4e-27, Organism=Homo sapiens, GI194440732, Length=212, Percent_Identity=33.9622641509434, Blast_Score=117, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17551302, Length=212, Percent_Identity=41.0377358490566, Blast_Score=159, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17510461, Length=212, Percent_Identity=35.8490566037736, Blast_Score=137, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17556142, Length=219, Percent_Identity=36.986301369863, Blast_Score=129, Evalue=8e-31, Organism=Drosophila melanogaster, GI24645375, Length=212, Percent_Identity=41.5094339622642, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI21355859, Length=212, Percent_Identity=41.5094339622642, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI45553325, Length=212, Percent_Identity=41.5094339622642, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI21355857, Length=213, Percent_Identity=38.4976525821596, Blast_Score=164, Evalue=5e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR005955 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: =5.2.1.2 [H]
Molecular weight: Translated: 24598; Mature: 24467
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAALELFSYWRSSAAYRVRIGLGLKALDYIAQPVHLVRDGGEQHAPAYAQLNPQELVPT CCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHH LRHGDVVIAQSLAILEYLEEAFADTAALLPRAPAERARVRALAQLIACDVHPLNNLRVMQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH VLEREFALDGARRQQWTRRWMERGFAALETQLARDAQTGRFCHGDAPGLADCVLIPQLYN HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC ARRFEVDLAPYPTLRRIEQACLQLPAFDAARPEMQADAVA CEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAALELFSYWRSSAAYRVRIGLGLKALDYIAQPVHLVRDGGEQHAPAYAQLNPQELVPT CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHH LRHGDVVIAQSLAILEYLEEAFADTAALLPRAPAERARVRALAQLIACDVHPLNNLRVMQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH VLEREFALDGARRQQWTRRWMERGFAALETQLARDAQTGRFCHGDAPGLADCVLIPQLYN HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC ARRFEVDLAPYPTLRRIEQACLQLPAFDAARPEMQADAVA CEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]