| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244297
Identifier: 21244297
GI number: 21244297
Start: 4236412
End: 4237338
Strand: Direct
Name: 21244297
Synonym: XAC3572
Alternate gene names: NA
Gene position: 4236412-4237338 (Clockwise)
Preceding gene: 21244296
Following gene: 21244298
Centisome position: 81.85
GC content: 64.72
Gene sequence:
>927_bases ATGGAAACCAAAGCCAATTACGTCCTGATCGGCGCCTTCACCATCGTGGCCGGCCTGGCCCTGCTGCTGTTCGGGCTCTG GGCCGCCAAATATTCCTCCGACCGCACCTGGCAGCAGTACCGGGTGGTGTTCCGCGAGGCGGTGACCGGCCTGTCGGTCG GCAGCCCGGTGCAGTACAACGGCATCGCGGTCGGCTCGATCACCGAGTTGACCCTGGCGCCGAACGACCCGCGGCAGGTG GTCGCGCATGTGCGCGTCAATTCGACCACGCCGATCAAGAGCGACACCCGCGCCAAGCTGGCGATCACCAGCCTGACCGG GCCGTCGATCATCCAGCTCTCCGGCGGCACCCCCGAAGCGCCGGCGCTGACCACCATCGACAAGAGCGATGCGCCGATCA TCCAGACCACGCCATCGGCGCTGCAGAACATCACCGACACCGCCAACCGCATCGTCGAGCGCATGGACCAGATGCTCTCG GACAAGAACGTGGCCAGCATTTCGGCCACCTTGCAGAACCTGGAAAAGATCAGCGGCGGCATTGCCGATCGCGACGAAGG CATGCAGGCGCTGATCGTCAGCGCGCGCGACGCCGCGCGCAATCTGGACACCACGCTGACCACCACCAACGGCACCATCA AGCGGCTGGATCAGAACCTGGTGCAGCAGCTGCCGGGCATCCTGGAAAAGCTCGATGCCACCCTGGTCAAGCTGGATTCG GCGGCCGGCAACGCCGACAACATCCTTGGCGAGAACCGCGCGGCCATCAATAGTTTTGCCAATGATGGGCTGGGCCAGCT CGGCCCCACACTGACCGAATTGCGTGGCCTGATCCGCGATCTGCGCCGGGTCAGCGACAAACTGGACAACAACCCTGCGC GCTACCTGCTCGGCCGCGACGCACCCAAGGAGTTCGAACCGAAATGA
Upstream 100 bases:
>100_bases TCGAGCAGATCGATCACCCCTGGATCCAGGACTATTTTCACGGTCCGCGCGCCCGCGCTGCGCGCGCGGCCAAGACCGAT TCCACCGAGACCGCCTGAGC
Downstream 100 bases:
>100_bases CTGCCATGCGCGTGTTGCGTCTCTTGCTGTGCGTCTCGTTGCTGGCGCTGGGCGGCTGCTCGGTCCTGACCGGCGGCGAC CAGAAACCGGCCACCATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues METKANYVLIGAFTIVAGLALLLFGLWAAKYSSDRTWQQYRVVFREAVTGLSVGSPVQYNGIAVGSITELTLAPNDPRQV VAHVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPEAPALTTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLS DKNVASISATLQNLEKISGGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILEKLDATLVKLDS AAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPARYLLGRDAPKEFEPK
Sequences:
>Translated_308_residues METKANYVLIGAFTIVAGLALLLFGLWAAKYSSDRTWQQYRVVFREAVTGLSVGSPVQYNGIAVGSITELTLAPNDPRQV VAHVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPEAPALTTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLS DKNVASISATLQNLEKISGGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILEKLDATLVKLDS AAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPARYLLGRDAPKEFEPK >Mature_308_residues METKANYVLIGAFTIVAGLALLLFGLWAAKYSSDRTWQQYRVVFREAVTGLSVGSPVQYNGIAVGSITELTLAPNDPRQV VAHVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPEAPALTTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLS DKNVASISATLQNLEKISGGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILEKLDATLVKLDS AAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPARYLLGRDAPKEFEPK
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005586 - InterPro: IPR003399 [H]
Pfam domain/function: PF03886 DUF330; PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 33046; Mature: 33046
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKANYVLIGAFTIVAGLALLLFGLWAAKYSSDRTWQQYRVVFREAVTGLSVGSPVQYN CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC GIAVGSITELTLAPNDPRQVVAHVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPEA CEEECCEEEEEECCCCHHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCC PALTTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASISATLQNLEKISGG CCEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC IADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILEKLDATLVKLDS CCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPARYLLGRD CCCCCHHHCCCCHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCC APKEFEPK CCCCCCCC >Mature Secondary Structure METKANYVLIGAFTIVAGLALLLFGLWAAKYSSDRTWQQYRVVFREAVTGLSVGSPVQYN CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC GIAVGSITELTLAPNDPRQVVAHVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPEA CEEECCEEEEEECCCCHHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCC PALTTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASISATLQNLEKISGG CCEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC IADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILEKLDATLVKLDS CCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPARYLLGRD CCCCCHHHCCCCHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCC APKEFEPK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12597275; 1551834 [H]