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The map label for this gene is lptF [H]

Identifier: 21244280

GI number: 21244280

Start: 4213955

End: 4215037

Strand: Reverse

Name: lptF [H]

Synonym: XAC3555

Alternate gene names: 21244280

Gene position: 4215037-4213955 (Counterclockwise)

Preceding gene: 21244285

Following gene: 21244279

Centisome position: 81.44

GC content: 66.48

Gene sequence:

>1083_bases
ATGCCGAAGCTCGATCGATACCTGCTCAGCGATTTCACCCAGAGCTTCCTGGCCACCTTGATCGTGCTGCTGGTCGTCAG
CGTCGGCGGCGTGCTGGTGGATATCCTCGGCAATATCGCCGACGGCCGCATCCCGGCGCGCTTGCTGCTGTCGCAGGTGG
GGCTGCAATTCGTGGCGTATCTGCCCATCATCCTGCCGCTGGCCTTGATGCTGGGCCTGCTACTGGCACTGGCGCGGCTG
TACCGCGATTCAGAAATGGCCGTCATTACCGCCATTGGCGTGGGTCCCAGGCGCATGCTGCGGCCGATGCTGATGCTGGT
GGTGCCGGTGGTGGTGGTCATCGGGTTGTGCTCGCTGTGGCTGGGCCCCTGGGCGAGCCGCACCGCCAAGGCGATGCTGG
AGGACGCCAATCGCAGCGTGCTGATGGCCGGCCTGGAGTCGGGCCAGTTCACGCCGCTGTCCGGTGGTGGGGTGGTGTAC
CTGCAGACGATCTCTGCCGACGGCAAGGGCCTGGGCAAGGTCTTCATGCAGCGCCAGCAGAACGATCGCATCGATGTGGT
CACCGCCGACCGCGGCGCGATGTTCTTCGAAGGCAAAACCGACCGTTACCTGCGCCTGGACGATGGCTACCGCACGGAAG
GTCCGGCGAGCGGCGCGACCCTGGACTACCGATTGATGAAGTTCGCCAGCAGCGATATCGCCTTGCCCGACCGCACCCGC
GTGCACGATGCCAACGACCCGGAAGTGATGTGGACCACCCAACTGCTGTCGGACGAACGCCCTGCCGCGCGCGCCCAGCT
GCATGAGCGCCTGGCGCCGCCATTGCTGGCACTGGCGTTCGCCTTGCTCACCTTGCCGCTGTCGCGCAGCGCACCGCGGC
AACAGCGTTATGGCCGGATCATGCTGGCGTTTCTGGCCTACATGGTGGGCACCAATCTGATGATCGTCGGCACCCAGTGG
ATCGCCAACGGCAAGACCCCGGCGGCGCTGGGCCTATGGTGGTTGACGCTGCCGCTGCTGGCCGTGGCGGTATGGGCGTA
TGCGCGCGACGGCCGCGTGCGTCGGCCGAGGGCGCGCGCATGA

Upstream 100 bases:

>100_bases
ATTCCGTAGGCAAATCCGTACAATCGCGGGCTGTTTACGCCAACCGGACTAGGCTGGCGGCGCCGCGAACGAATCCGAGA
GTTTAAAACAAGCCCACCCC

Downstream 100 bases:

>100_bases
GGCTGACGCCGCGGGTCCACGATTGGTATGTCGGTCGGGTGGTGCTGTTTACCGTGCTGCTGACCTGGGCGGTGCTGCTG
GGGCTGGATCTGGTCAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAYLPIILPLALMLGLLLALARL
YRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCSLWLGPWASRTAKAMLEDANRSVLMAGLESGQFTPLSGGGVVY
LQTISADGKGLGKVFMQRQQNDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDRTR
VHDANDPEVMWTTQLLSDERPAARAQLHERLAPPLLALAFALLTLPLSRSAPRQQRYGRIMLAFLAYMVGTNLMIVGTQW
IANGKTPAALGLWWLTLPLLAVAVWAYARDGRVRRPRARA

Sequences:

>Translated_360_residues
MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAYLPIILPLALMLGLLLALARL
YRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCSLWLGPWASRTAKAMLEDANRSVLMAGLESGQFTPLSGGGVVY
LQTISADGKGLGKVFMQRQQNDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDRTR
VHDANDPEVMWTTQLLSDERPAARAQLHERLAPPLLALAFALLTLPLSRSAPRQQRYGRIMLAFLAYMVGTNLMIVGTQW
IANGKTPAALGLWWLTLPLLAVAVWAYARDGRVRRPRARA
>Mature_359_residues
PKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAYLPIILPLALMLGLLLALARLY
RDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCSLWLGPWASRTAKAMLEDANRSVLMAGLESGQFTPLSGGGVVYL
QTISADGKGLGKVFMQRQQNDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDRTRV
HDANDPEVMWTTQLLSDERPAARAQLHERLAPPLLALAFALLTLPLSRSAPRQQRYGRIMLAFLAYMVGTNLMIVGTQWI
ANGKTPAALGLWWLTLPLLAVAVWAYARDGRVRRPRARA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=346, Percent_Identity=32.3699421965318, Blast_Score=115, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 39524; Mature: 39393

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCSLW
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LGPWASRTAKAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQRQQ
HCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCC
NDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDRTR
CCCEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
VHDANDPEVMWTTQLLSDERPAARAQLHERLAPPLLALAFALLTLPLSRSAPRQQRYGRI
CCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
MLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWAYARDGRVRRPRARA
HHHHHHHHHCCCEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PKLDRYLLSDFTQSFLATLIVLLVVSVGGVLVDILGNIADGRIPARLLLSQVGLQFVAY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LPIILPLALMLGLLLALARLYRDSEMAVITAIGVGPRRMLRPMLMLVVPVVVVIGLCSLW
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LGPWASRTAKAMLEDANRSVLMAGLESGQFTPLSGGGVVYLQTISADGKGLGKVFMQRQQ
HCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCC
NDRIDVVTADRGAMFFEGKTDRYLRLDDGYRTEGPASGATLDYRLMKFASSDIALPDRTR
CCCEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
VHDANDPEVMWTTQLLSDERPAARAQLHERLAPPLLALAFALLTLPLSRSAPRQQRYGRI
CCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
MLAFLAYMVGTNLMIVGTQWIANGKTPAALGLWWLTLPLLAVAVWAYARDGRVRRPRARA
HHHHHHHHHCCCEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]