BacMap

Definition	Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession	NC_003919
Length	5,175,554

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The map label for this gene is fabG [H]

Identifier: 21244211

GI number: 21244211

Start: 4119840

End: 4120580

Strand: Direct

Name: fabG [H]

Synonym: XAC3486

Alternate gene names: 21244211

Gene position: 4119840-4120580 (Clockwise)

Preceding gene: 77748720

Following gene: 21244212

Centisome position: 79.6

GC content: 64.1

Gene sequence:

>741_bases
ATGACTCTCCGCATCGCATACGTCACCAGTGGCATGGGTAGTGTCGGTACCGCGATCTGCCAGAAGCTGGCGCGCAGCGG
GCATACCGTGGTTGCCGGTTGCGGGCCTAATTCGCCACGCAAGGCGTCGTGGTTGCGCGAGCAGCGCGAGTTGGGCTTCG
ATTTCGTGGCATCCGAAGGCAATGCCGCCGATTGGGAGTCCACCGTGGCTGCGTTCGCCAAGGTCAAGGCTGAAGTCGGC
GAGATCGATGTGCTGGTCAACAATGCCGGCGGCAGCCGCGACACCTTGTTCCGGCAGATGACGCGCGACGACTGGAATGC
GGTGATCGCCAGCAACCTGCATTCGCTGTTCAACATCACCAAGCAGGTGGTCGACGGCATGACCTCGCGCGGCTGGGGGC
GCATCGTCAACATCGGCTCGGTCAGCGCACACAAGGGCCAGATCGGGCAGATCAATTTCGCCACTGCCAAGGCGGCAATG
CATGGCTTCAGTCGCGCGTTGGCGCAAGAGGTCGCCTCGCGCGGGGTCACCGTCAACACCATCTCGCCCGGCTATATCGC
CAGCGCCTCGATCAGCAGCTTTCCACCGGATGTGCTCGATCGCCTGGCCACCTCGGTGCCGGTGCGCCGGCTCGGCAAAC
CGGCCGAAGTTGCCGGACTGTGCGCCTGGCTCGCCTCCGATGAGGCCGCCTATGTCACCGGTGCCGATTACGCGGTGAAT
GGCGGGCTCTACATGGGCTAA

Upstream 100 bases:

>100_bases
ACGTCCAAATACGAAAACAGATACCGAAAAGCGGCTCTTGTCTCTACCGATTCCCCAGTCCCGATTCCCCATTCCCAAAC
TCCGAAGGAGTTAAACACCA

Downstream 100 bases:

>100_bases
GCGAGCGCACGACCGACGGCCGTTGCGCTGTACGCACAACACGCTCTCGCCGCGCACCTCTGCATGTCCCGCTGCCCACC
TGCCCCGCACGTCCGCCGCC

Product: 3-ketoacyl-(acyl-carrier-protein) reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTLRIAYVTSGMGSVGTAICQKLARSGHTVVAGCGPNSPRKASWLREQRELGFDFVASEGNAADWESTVAAFAKVKAEVG
EIDVLVNNAGGSRDTLFRQMTRDDWNAVIASNLHSLFNITKQVVDGMTSRGWGRIVNIGSVSAHKGQIGQINFATAKAAM
HGFSRALAQEVASRGVTVNTISPGYIASASISSFPPDVLDRLATSVPVRRLGKPAEVAGLCAWLASDEAAYVTGADYAVN
GGLYMG

Sequences:

>Translated_246_residues
MTLRIAYVTSGMGSVGTAICQKLARSGHTVVAGCGPNSPRKASWLREQRELGFDFVASEGNAADWESTVAAFAKVKAEVG
EIDVLVNNAGGSRDTLFRQMTRDDWNAVIASNLHSLFNITKQVVDGMTSRGWGRIVNIGSVSAHKGQIGQINFATAKAAM
HGFSRALAQEVASRGVTVNTISPGYIASASISSFPPDVLDRLATSVPVRRLGKPAEVAGLCAWLASDEAAYVTGADYAVN
GGLYMG
>Mature_245_residues
TLRIAYVTSGMGSVGTAICQKLARSGHTVVAGCGPNSPRKASWLREQRELGFDFVASEGNAADWESTVAAFAKVKAEVGE
IDVLVNNAGGSRDTLFRQMTRDDWNAVIASNLHSLFNITKQVVDGMTSRGWGRIVNIGSVSAHKGQIGQINFATAKAAMH
GFSRALAQEVASRGVTVNTISPGYIASASISSFPPDVLDRLATSVPVRRLGKPAEVAGLCAWLASDEAAYVTGADYAVNG
GLYMG

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=250, Percent_Identity=31.2, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=29.3388429752066, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=30.0813008130081, Blast_Score=99, Evalue=2e-21,
Organism=Homo sapiens, GI4758504, Length=254, Percent_Identity=29.5275590551181, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=29.2, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI66933014, Length=172, Percent_Identity=29.6511627906977, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=27.9352226720648, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI4504505, Length=249, Percent_Identity=28.1124497991968, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=26.984126984127, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI83715985, Length=254, Percent_Identity=27.5590551181102, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=27.9352226720648, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI59889578, Length=174, Percent_Identity=29.8850574712644, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI7705925, Length=184, Percent_Identity=23.9130434782609, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=40.4858299595142, Blast_Score=180, Evalue=7e-47,
Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=35.3174603174603, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=29.2682926829268, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788459, Length=176, Percent_Identity=34.0909090909091, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=30.4, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1790717, Length=196, Percent_Identity=30.6122448979592, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI2367365, Length=245, Percent_Identity=29.3877551020408, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=27.5303643724696, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1789378, Length=247, Percent_Identity=28.3400809716599, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787905, Length=242, Percent_Identity=29.3388429752066, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1786812, Length=204, Percent_Identity=26.4705882352941, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787820, Length=191, Percent_Identity=28.2722513089005, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1789057, Length=257, Percent_Identity=26.4591439688716, Blast_Score=68, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=243, Percent_Identity=32.9218106995885, Blast_Score=133, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI25147288, Length=245, Percent_Identity=31.8367346938775, Blast_Score=129, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17560676, Length=256, Percent_Identity=28.90625, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17538182, Length=254, Percent_Identity=30.3149606299213, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17568967, Length=242, Percent_Identity=28.9256198347107, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17561402, Length=248, Percent_Identity=27.8225806451613, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI115534694, Length=239, Percent_Identity=26.7782426778243, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=269, Percent_Identity=27.5092936802974, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17562906, Length=274, Percent_Identity=24.8175182481752, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=185, Percent_Identity=29.1891891891892, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=274, Percent_Identity=24.8175182481752, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=188, Percent_Identity=29.2553191489362, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508651, Length=255, Percent_Identity=24.3137254901961, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=269, Percent_Identity=24.907063197026, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=205, Percent_Identity=28.780487804878, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=210, Percent_Identity=28.0952380952381, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=189, Percent_Identity=26.984126984127, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=270, Percent_Identity=24.4444444444444, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=272, Percent_Identity=25, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=25.9398496240602, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=204, Percent_Identity=27.4509803921569, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17551412, Length=181, Percent_Identity=29.8342541436464, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17536651, Length=179, Percent_Identity=27.3743016759777, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=199, Percent_Identity=26.1306532663317, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=25.6603773584906, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17563726, Length=176, Percent_Identity=26.1363636363636, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6322861, Length=167, Percent_Identity=28.7425149700599, Blast_Score=83, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6324126, Length=259, Percent_Identity=24.3243243243243, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24639444, Length=251, Percent_Identity=33.0677290836653, Blast_Score=117, Evalue=7e-27,
Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=30.6772908366534, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=28.3464566929134, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21357041, Length=174, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=25.8196721311475, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=25.7936507936508, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24644339, Length=191, Percent_Identity=28.7958115183246, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28571526, Length=178, Percent_Identity=30.3370786516854, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI18859837, Length=245, Percent_Identity=29.3877551020408, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24644337, Length=169, Percent_Identity=29.585798816568, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011283
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.36 [H]

Molecular weight: Translated: 25882; Mature: 25750

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRIAYVTSGMGSVGTAICQKLARSGHTVVAGCGPNSPRKASWLREQRELGFDFVASEG
CEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCC
NAADWESTVAAFAKVKAEVGEIDVLVNNAGGSRDTLFRQMTRDDWNAVIASNLHSLFNIT
CCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQVVDGMTSRGWGRIVNIGSVSAHKGQIGQINFATAKAAMHGFSRALAQEVASRGVTVNT
HHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEE
ISPGYIASASISSFPPDVLDRLATSVPVRRLGKPAEVAGLCAWLASDEAAYVTGADYAVN
CCCCCEEECCCCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCEEEECCCEEEC
GGLYMG
CCEECC
>Mature Secondary Structure 
TLRIAYVTSGMGSVGTAICQKLARSGHTVVAGCGPNSPRKASWLREQRELGFDFVASEG
EEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCC
NAADWESTVAAFAKVKAEVGEIDVLVNNAGGSRDTLFRQMTRDDWNAVIASNLHSLFNIT
CCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQVVDGMTSRGWGRIVNIGSVSAHKGQIGQINFATAKAAMHGFSRALAQEVASRGVTVNT
HHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEE
ISPGYIASASISSFPPDVLDRLATSVPVRRLGKPAEVAGLCAWLASDEAAYVTGADYAVN
CCCCCEEECCCCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCEEEECCCEEEC
GGLYMG
CCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2670935 [H]