| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is ilvC
Identifier: 21244176
GI number: 21244176
Start: 4072185
End: 4073186
Strand: Direct
Name: ilvC
Synonym: XAC3451
Alternate gene names: 21244176
Gene position: 4072185-4073186 (Clockwise)
Preceding gene: 21244173
Following gene: 21244177
Centisome position: 78.68
GC content: 62.87
Gene sequence:
>1002_bases ATGAGCAACCACACCCAACCGAAAATCGCGATCATCGGCTACGGCAGCCAGGGCCGCGCACATGCGCTGAACCTGCGCGA TTCCGGCTTCGACGTCACCGTCGGCCTGCGTCCCGGTGGCCCGACCGAGGCCAAGGCGCAGGCCGATGGCTTCACCGTCG TGGCGCCGTCCGAGGCGGTCAAGAGTGCTGACCTGGTCGCCATCCTGACCCCGGACATGGTGCAGAAGAAGCTCTACGAA GAGGTCATCGCCCCGAACATGAAGCAGGGCGCCTGCCTGCTGTTCGCGCATGGCCTGAACGTGCATTTCGACATGATCAC CCCGCGCGCCGATCTGGACGTGGTGCTGGTCGCGCCCAAGGGCCCGGGCGCATTGGTACGTCGCGAATATGAAATCGGCC GCGGCGTGCCGTGCATCTATGCGGTCTACCAGGACACCAGCGGCAAGGCCGAGCAGTTCGCGTTGACCTATGCCGGCGGC CTGGGCGGCGCGCGCGCCAACATCATCAAGACCACGTTCAAGGAAGAAACCGAAACCGATCTGTTCGGCGAGCAGGCCGT GCTGTGCGGCGGCGCCTCCTCGCTGGTGCAGGCCGGTTTCGAAGTGCTGGTCGAGGCCGGCTATCAGCCGGAAATCGCAT ACTACGAAGTGCTGCACGAATTGAAGTTGATCGTGGACCTGTTCTACGAAGGCGGCATCACCCGTATGCTGGAATTCGTT TCCGAAACCGCGCAATACGGCGATTATGTCAGCGGCCCGCGCGTGATCGATGCCGGCACCAAGGCGCGCATGAAGGATGT GCTGACCGACATCCAGAACGGCACCTTCACCAAGAACTGGGTGGCCGAATACGACGCCGGCCTGCCGAACTACAACAAGT TCAAGCAGGCCGATCTGGAGCACCCGATCGAGGAAGTGGGCAAGAAGCTGCGCGCCAAGATGGTGTGGCTCAACGGGCAA CAGCAAGCCGCTGCCGCACCTGCGAATCAACAGGCGGCATAA
Upstream 100 bases:
>100_bases CATCGCTCGTCCCCGCTTTGCTCAGCCGGCCAGTGCACGCACTGCCGGCTGATCCATTTATCCACTGCCCATCTCCACTG CCAACCCGCAAGGACATTCC
Downstream 100 bases:
>100_bases CGCCGCCTCCCCCACCGCTTAAACCGAAGGTCCGCAACGCATGAACACCTCCGCACACAGCACGCCCCGCAATGGCGCGC GCTGGCTGACGCAGGCCCTG
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSNHTQPKIAIIGYGSQGRAHALNLRDSGFDVTVGLRPGGPTEAKAQADGFTVVAPSEAVKSADLVAILTPDMVQKKLYE EVIAPNMKQGACLLFAHGLNVHFDMITPRADLDVVLVAPKGPGALVRREYEIGRGVPCIYAVYQDTSGKAEQFALTYAGG LGGARANIIKTTFKEETETDLFGEQAVLCGGASSLVQAGFEVLVEAGYQPEIAYYEVLHELKLIVDLFYEGGITRMLEFV SETAQYGDYVSGPRVIDAGTKARMKDVLTDIQNGTFTKNWVAEYDAGLPNYNKFKQADLEHPIEEVGKKLRAKMVWLNGQ QQAAAAPANQQAA
Sequences:
>Translated_333_residues MSNHTQPKIAIIGYGSQGRAHALNLRDSGFDVTVGLRPGGPTEAKAQADGFTVVAPSEAVKSADLVAILTPDMVQKKLYE EVIAPNMKQGACLLFAHGLNVHFDMITPRADLDVVLVAPKGPGALVRREYEIGRGVPCIYAVYQDTSGKAEQFALTYAGG LGGARANIIKTTFKEETETDLFGEQAVLCGGASSLVQAGFEVLVEAGYQPEIAYYEVLHELKLIVDLFYEGGITRMLEFV SETAQYGDYVSGPRVIDAGTKARMKDVLTDIQNGTFTKNWVAEYDAGLPNYNKFKQADLEHPIEEVGKKLRAKMVWLNGQ QQAAAAPANQQAA >Mature_332_residues SNHTQPKIAIIGYGSQGRAHALNLRDSGFDVTVGLRPGGPTEAKAQADGFTVVAPSEAVKSADLVAILTPDMVQKKLYEE VIAPNMKQGACLLFAHGLNVHFDMITPRADLDVVLVAPKGPGALVRREYEIGRGVPCIYAVYQDTSGKAEQFALTYAGGL GGARANIIKTTFKEETETDLFGEQAVLCGGASSLVQAGFEVLVEAGYQPEIAYYEVLHELKLIVDLFYEGGITRMLEFVS ETAQYGDYVSGPRVIDAGTKARMKDVLTDIQNGTFTKNWVAEYDAGLPNYNKFKQADLEHPIEEVGKKLRAKMVWLNGQQ QAAAAPANQQAA
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=288, Percent_Identity=35.4166666666667, Blast_Score=148, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6323387, Length=330, Percent_Identity=32.7272727272727, Blast_Score=142, Evalue=1e-34,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_XANAC (Q8PH09)
Other databases:
- EMBL: AE008923 - RefSeq: NP_643758.1 - ProteinModelPortal: Q8PH09 - SMR: Q8PH09 - GeneID: 1157522 - GenomeReviews: AE008923_GR - KEGG: xac:XAC3451 - NMPDR: fig|190486.1.peg.3402 - HOGENOM: HBG286525 - OMA: MAYAKGI - ProtClustDB: PRK05479 - BioCyc: XAXO190486:XAC3451-MONOMER - BRENDA: 1.1.1.86 - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 35988; Mature: 35857
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: ACT_SITE 97-97
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHTQPKIAIIGYGSQGRAHALNLRDSGFDVTVGLRPGGPTEAKAQADGFTVVAPSEAV CCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCHHHH KSADLVAILTPDMVQKKLYEEVIAPNMKQGACLLFAHGLNVHFDMITPRADLDVVLVAPK CCCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECCCCCCCEEEECCC GPGALVRREYEIGRGVPCIYAVYQDTSGKAEQFALTYAGGLGGARANIIKTTFKEETETD CCCHHHEEEHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHH LFGEQAVLCGGASSLVQAGFEVLVEAGYQPEIAYYEVLHELKLIVDLFYEGGITRMLEFV HCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SETAQYGDYVSGPRVIDAGTKARMKDVLTDIQNGTFTKNWVAEYDAGLPNYNKFKQADLE HHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHC HPIEEVGKKLRAKMVWLNGQQQAAAAPANQQAA CHHHHHHHHHHEEEEEECCCHHHHCCCCCCCCC >Mature Secondary Structure SNHTQPKIAIIGYGSQGRAHALNLRDSGFDVTVGLRPGGPTEAKAQADGFTVVAPSEAV CCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCHHHH KSADLVAILTPDMVQKKLYEEVIAPNMKQGACLLFAHGLNVHFDMITPRADLDVVLVAPK CCCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECCCCCCCEEEECCC GPGALVRREYEIGRGVPCIYAVYQDTSGKAEQFALTYAGGLGGARANIIKTTFKEETETD CCCHHHEEEHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHH LFGEQAVLCGGASSLVQAGFEVLVEAGYQPEIAYYEVLHELKLIVDLFYEGGITRMLEFV HCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SETAQYGDYVSGPRVIDAGTKARMKDVLTDIQNGTFTKNWVAEYDAGLPNYNKFKQADLE HHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHC HPIEEVGKKLRAKMVWLNGQQQAAAAPANQQAA CHHHHHHHHHHEEEEEECCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217