| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244153
Identifier: 21244153
GI number: 21244153
Start: 4036464
End: 4037081
Strand: Direct
Name: 21244153
Synonym: XAC3428
Alternate gene names: NA
Gene position: 4036464-4037081 (Clockwise)
Preceding gene: 21244146
Following gene: 21244155
Centisome position: 77.99
GC content: 66.83
Gene sequence:
>618_bases ATGTCGCCCTCACCTCCATCGCTGCTGTTGCTGGATTTCGACGGCGTACTTGCTCACTACGCGCGGCCACGGCGCATGGC CGCTCTTGCAGCAGCGGCGAGTTGCTCACCGCAGCGCGTGCATGAGGTGTTGTTCGCGCAGGGTCTGGAGCGCGCCTACG ATGCTGGTGCGATCGACACGCAGGCGTATCTGGCGCAGTTGAGCGAAGGGCTGGGGCAGCCGATCGATCGCGCTACCTGG GTCGATGCGCGCGTGGCGGCCTGCCGCGCCGACCCGTCGGTGGTGACACAGGTGCTGGCGGTATCGACGACTACGGCGGT GGCGGTGCTCACCAATAATGGCCCGCTGATGGCAGAAGCGATCGAGCGGATCGTGCCATCGCTATTTCCGTTGTTGCGGG GCCGCGTGCTGTGCAGCGGTGCACTGGGCGGCCGCAAACCGGATGTGCCGGTCTATCAGCGCGCGCTTGCGCAACTTGAG CAACGCGCCGAGCGCACGTTGTTTGTCGACGACCTGTTCGTCAACGTGCGTGGCGCACGCGCGGCCGGCCTGCACGCCGA CACCGTGCGCGACGCCCGCGCGTTGCGGCGAGTGCTGAAGCGATACGGACTTGCATGA
Upstream 100 bases:
>100_bases ACACCACCTACCTGCGCGAATGTCCTGCATTGCAGGTCTTGCGCGCTTGCCATGCCGCGCCGAATCGATAACGCTGCGCA GCCACCGCACGAGCACGCAC
Downstream 100 bases:
>100_bases AACCAGGCCCCTCTCCCGTCGGGAGAGGGGTTGGGGGTGAGGGTACGGCGGAAGACAGCCATCCCATCCAGGCAATTAAA AGACCGGGCACTGCGTCAGC
Product: hydrolase
Products: NA
Alternate protein names: HAD-Superfamily Hydrolase; HAD Family Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase Hydrolase Protein; HAD Family Phosphatase
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSPSPPSLLLLDFDGVLAHYARPRRMAALAAAASCSPQRVHEVLFAQGLERAYDAGAIDTQAYLAQLSEGLGQPIDRATW VDARVAACRADPSVVTQVLAVSTTTAVAVLTNNGPLMAEAIERIVPSLFPLLRGRVLCSGALGGRKPDVPVYQRALAQLE QRAERTLFVDDLFVNVRGARAAGLHADTVRDARALRRVLKRYGLA
Sequences:
>Translated_205_residues MSPSPPSLLLLDFDGVLAHYARPRRMAALAAAASCSPQRVHEVLFAQGLERAYDAGAIDTQAYLAQLSEGLGQPIDRATW VDARVAACRADPSVVTQVLAVSTTTAVAVLTNNGPLMAEAIERIVPSLFPLLRGRVLCSGALGGRKPDVPVYQRALAQLE QRAERTLFVDDLFVNVRGARAAGLHADTVRDARALRRVLKRYGLA >Mature_204_residues SPSPPSLLLLDFDGVLAHYARPRRMAALAAAASCSPQRVHEVLFAQGLERAYDAGAIDTQAYLAQLSEGLGQPIDRATWV DARVAACRADPSVVTQVLAVSTTTAVAVLTNNGPLMAEAIERIVPSLFPLLRGRVLCSGALGGRKPDVPVYQRALAQLEQ RAERTLFVDDLFVNVRGARAAGLHADTVRDARALRRVLKRYGLA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22010; Mature: 21878
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSPPSLLLLDFDGVLAHYARPRRMAALAAAASCSPQRVHEVLFAQGLERAYDAGAIDT CCCCCCCEEEEECHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHH QAYLAQLSEGLGQPIDRATWVDARVAACRADPSVVTQVLAVSTTTAVAVLTNNGPLMAEA HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHH IERIVPSLFPLLRGRVLCSGALGGRKPDVPVYQRALAQLEQRAERTLFVDDLFVNVRGAR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AAGLHADTVRDARALRRVLKRYGLA CCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SPSPPSLLLLDFDGVLAHYARPRRMAALAAAASCSPQRVHEVLFAQGLERAYDAGAIDT CCCCCCEEEEECHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHH QAYLAQLSEGLGQPIDRATWVDARVAACRADPSVVTQVLAVSTTTAVAVLTNNGPLMAEA HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHH IERIVPSLFPLLRGRVLCSGALGGRKPDVPVYQRALAQLEQRAERTLFVDDLFVNVRGAR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AAGLHADTVRDARALRRVLKRYGLA CCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA