| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is acoK [H]
Identifier: 21244146
GI number: 21244146
Start: 4026449
End: 4029220
Strand: Direct
Name: acoK [H]
Synonym: XAC3421
Alternate gene names: 21244146
Gene position: 4026449-4029220 (Clockwise)
Preceding gene: 21244145
Following gene: 21244153
Centisome position: 77.8
GC content: 66.74
Gene sequence:
>2772_bases ATGCTCAAGCCTGTTGCGCTGCTCACCCCGCGCCCGTCACCCTCGCGCGACCCCGCGATTCCCGATTGGCTGCTTGCCGG CAAGCTGGAGCCTGCGTTGCCGCGCCCCGCCGCGGTGGTGCGCGGCGCGCTACTGGCTGCGCTGGATCAGGCGCAGGCAC GCCCGCTGACGCTATTGCTCGCCCCACCCGGATTCGGCAAGACCACGCTGCTGGCGCAGTGGCATGCGCACCTGAGTACG CGCGAGCAGGGCCCGGTGGCATGGCTGTCGCTGGACGAAGAAGATGCCGACGCTGCGCGTTTTCTCGGCCATCTTGCGCT GGCGCTGCAGAACGCAGGCGCCGATCACGCGCTGTGCGCCACCGTGCTGCACAACCGCGATCACGACCCGCGCGACGCGA CGGCATTGCTGATTCGCGCGCTGCGCGCGGCGCCCCGCCGCATCAGCGTGATTCTCGACGACTACGACCGACTCGGCAGC AGCCCTGTCGATGAACTGGTGCTACGCCTGATCGAACACAGTGGTGGGCGTCTGCATCTGGTGCTTGCGACCCGCCGCGT GCCCAATCTGCCGCTGGCGCGGCTGGATCTGCACGCGCAGCTCAGCCGCATCGGCAGCACGCAGCTGGCGCTCGACAACA CCGAAGCGCAGGCGTTGCTAGGCCCGCACGTGCCAACACCTGTGGTGGACGAACTACGCAACTACACAGAAGGCTGGCCA GTGGCGCTGCAACTGGCGCGGCTGTGGCTGCAAGGCGATACCCAACGTCAGCAGGAAGTCGCCGCACGTTTCTCAGGGCG CAGCGCGCAGATTGCCGCGTATCTGGCCGAACAGGTGGTCAACGATCTGGACCCGGACACCCGCGAGCTCCTGCTACGCA CCAGCCCGCTGGAACGCTTCAACGCCGCGCTCGCCGATGCAGTGCGCCAGCGCGAGGACAGCGGCCGCTTGCTGGCACGG CTGGAGCATTTTCATGGCCTGCTGGTGCCGCTGGATGGCGAGCGCGAATGGTTCCGCTATCACCCGCTGTTTGCCGACTT CTTGCAGCAACTGCTCGACCGCGAACATCCAGGGCAGAGCGTGCAGCTGCATCAACGCGCAGCGCGCTGGTTCGGTGATC ACCAGCATCTTGCCGAAGCGGTGCGGCATGCGTGGCGCGGCAACTGCGGCGAACTTGCCGCCAGCTACATCGCACGCGCC GGCACCTGGCAGCTGCTGCTGACTCACGGCACGCATGAAGTGCGCGCACTACTGCGCCATTTCGACCACCGCACCATTCG CGACACGCCCGCGCTCAATCTCACCCAGGCGCATCTGCACATCAGGCTTGGCGAGTTCAGCCACGCACGCCTGTTGCTGG AGCGCTTCCGCGATTTTCCGGCTGCGCTACGCGAGCCGCTCCAGCGCGATTACACCGTGGTTGTGGCGCTATTGCGCGAC CGTCTGGATGAAATCTGCGGCAACCCGCATGGCCTGACCCAGATCGCCGCCCAGGCCGGCGCACTGGATGAAGACGACCA TCTCGGCCGCGGCATGTTGCTCTGCATCTGCGCCACCACCGCGATTGCGCAAGGCGCGTTCGCGGTTGCCGAGCGCTACG CGCGCAACGCGCGCGACACCATGCAGCGCGGCGGTAGCGACGTCGGTGCCAGCCAGGCAATGTTGTCGCTGGGGCAGAGC CTGTTCTATCGCGGCCGGCTCAGCGATGCGGAAGCCTGCTATCAACAAGCACTGAGCTGGTGCGCACGTACCCCGCAACT GGATCGGGTGCTGGAGGCCGCCGCTCAGTGCCTGCTTGCGCAGTCGCACTACGAACGCGGCCACCACGACGATGCAGCCG ACCTGCTGCACCCGGCGCTGGAATTGCTGGAGCAACACGATGGGGGCATGGACGTGCTGGCCGCCGGATACGGCACCGCG CTGGGGTTGGAACGCGTGCGCGACCACAGCGGACGCAGTGCGTTGCTGTTGCTGGAGCATATCGAACAGATTGCGCACGG ACGCAAGCTGGCGCGCTTGTCGGAACTGGCTGCAGCATGGCGGCTGATGCTGTTGCTGGAACATCCAGGCAACGCTGCCA TCGATGTGCTGATCGCACGTACCGGCGGCGAATCGGGCCTGGCGCACACCTTGCGCTCGCCGCACCGCTGGCACGATCGG GCGGCGATGGGTTTCGCACTGGCCCGCTGGCATCGCCTGGCCGGGCGCAGCAGCGCAGCGCTGAGCATCCTCGGGCAGAT CGAGCAGGCCTGCCTGGCCAACGACAATGTCTGCCATCTGGCGCGCACCCGTGCACGCATCGCGCTGGTACTGCAGCAAC GCGGCGAACTGGTCGCCGCCCTGCCGTATCTGTACAGCGCGCTGGACCATGTCGCGCTCACGCAAAGCTGGCAGGCCATC GTGGAACTGGGCTTGCCGGCCAAGGCGATGCTGCGCTCGCTCCGCCAGCACGACCCGCAGACCGTGGGCGGCACCACGCG TGCGTTGACCATCCAGGCGTTGCTCGAACGCCTCAGCGGCGACGACGATCCGGCCGGCGACATCTTCAGCGAGCGTGAAC TGGAAGTGCTGGCGCAACTGGCGCGCGGCTATTCCAACAAGCAGATCGCACGCTGCCTGCACCTGTCGGAAAACACGGTC AAATTCCATCTGAAAAACCTGTACCGCAAGCTCGACGCGCGCAGCCGCGAAGGCGCGCTTGCGCAGGCATTGCAGCGCGG GTTGTTGCGTGGAAGCAACCAGCATGCAGATCAGCCGCTACAACCTGACTGA
Upstream 100 bases:
>100_bases GCCGAATCAGGTGATTACGCTGCATTGCCGCTGTTTCACCCCGATCTGCAGCGTGCCGAGCCGGCACGCTGTCGACGCTC GATACGGCCGCTCTCGCCTC
Downstream 100 bases:
>100_bases CCCAGATCCGCATGTATCCTGCGTTCAACGCAGGTTTGCACGTGTGGCGGCCAGGCCTGACAGCGTTGGCCGCCCCGCAC GCATCACCCGAACGTCAGCG
Product: transcriptional regulator
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 923; Mature: 923
Protein sequence:
>923_residues MLKPVALLTPRPSPSRDPAIPDWLLAGKLEPALPRPAAVVRGALLAALDQAQARPLTLLLAPPGFGKTTLLAQWHAHLST REQGPVAWLSLDEEDADAARFLGHLALALQNAGADHALCATVLHNRDHDPRDATALLIRALRAAPRRISVILDDYDRLGS SPVDELVLRLIEHSGGRLHLVLATRRVPNLPLARLDLHAQLSRIGSTQLALDNTEAQALLGPHVPTPVVDELRNYTEGWP VALQLARLWLQGDTQRQQEVAARFSGRSAQIAAYLAEQVVNDLDPDTRELLLRTSPLERFNAALADAVRQREDSGRLLAR LEHFHGLLVPLDGEREWFRYHPLFADFLQQLLDREHPGQSVQLHQRAARWFGDHQHLAEAVRHAWRGNCGELAASYIARA GTWQLLLTHGTHEVRALLRHFDHRTIRDTPALNLTQAHLHIRLGEFSHARLLLERFRDFPAALREPLQRDYTVVVALLRD RLDEICGNPHGLTQIAAQAGALDEDDHLGRGMLLCICATTAIAQGAFAVAERYARNARDTMQRGGSDVGASQAMLSLGQS LFYRGRLSDAEACYQQALSWCARTPQLDRVLEAAAQCLLAQSHYERGHHDDAADLLHPALELLEQHDGGMDVLAAGYGTA LGLERVRDHSGRSALLLLEHIEQIAHGRKLARLSELAAAWRLMLLLEHPGNAAIDVLIARTGGESGLAHTLRSPHRWHDR AAMGFALARWHRLAGRSSAALSILGQIEQACLANDNVCHLARTRARIALVLQQRGELVAALPYLYSALDHVALTQSWQAI VELGLPAKAMLRSLRQHDPQTVGGTTRALTIQALLERLSGDDDPAGDIFSERELEVLAQLARGYSNKQIARCLHLSENTV KFHLKNLYRKLDARSREGALAQALQRGLLRGSNQHADQPLQPD
Sequences:
>Translated_923_residues MLKPVALLTPRPSPSRDPAIPDWLLAGKLEPALPRPAAVVRGALLAALDQAQARPLTLLLAPPGFGKTTLLAQWHAHLST REQGPVAWLSLDEEDADAARFLGHLALALQNAGADHALCATVLHNRDHDPRDATALLIRALRAAPRRISVILDDYDRLGS SPVDELVLRLIEHSGGRLHLVLATRRVPNLPLARLDLHAQLSRIGSTQLALDNTEAQALLGPHVPTPVVDELRNYTEGWP VALQLARLWLQGDTQRQQEVAARFSGRSAQIAAYLAEQVVNDLDPDTRELLLRTSPLERFNAALADAVRQREDSGRLLAR LEHFHGLLVPLDGEREWFRYHPLFADFLQQLLDREHPGQSVQLHQRAARWFGDHQHLAEAVRHAWRGNCGELAASYIARA GTWQLLLTHGTHEVRALLRHFDHRTIRDTPALNLTQAHLHIRLGEFSHARLLLERFRDFPAALREPLQRDYTVVVALLRD RLDEICGNPHGLTQIAAQAGALDEDDHLGRGMLLCICATTAIAQGAFAVAERYARNARDTMQRGGSDVGASQAMLSLGQS LFYRGRLSDAEACYQQALSWCARTPQLDRVLEAAAQCLLAQSHYERGHHDDAADLLHPALELLEQHDGGMDVLAAGYGTA LGLERVRDHSGRSALLLLEHIEQIAHGRKLARLSELAAAWRLMLLLEHPGNAAIDVLIARTGGESGLAHTLRSPHRWHDR AAMGFALARWHRLAGRSSAALSILGQIEQACLANDNVCHLARTRARIALVLQQRGELVAALPYLYSALDHVALTQSWQAI VELGLPAKAMLRSLRQHDPQTVGGTTRALTIQALLERLSGDDDPAGDIFSERELEVLAQLARGYSNKQIARCLHLSENTV KFHLKNLYRKLDARSREGALAQALQRGLLRGSNQHADQPLQPD >Mature_923_residues MLKPVALLTPRPSPSRDPAIPDWLLAGKLEPALPRPAAVVRGALLAALDQAQARPLTLLLAPPGFGKTTLLAQWHAHLST REQGPVAWLSLDEEDADAARFLGHLALALQNAGADHALCATVLHNRDHDPRDATALLIRALRAAPRRISVILDDYDRLGS SPVDELVLRLIEHSGGRLHLVLATRRVPNLPLARLDLHAQLSRIGSTQLALDNTEAQALLGPHVPTPVVDELRNYTEGWP VALQLARLWLQGDTQRQQEVAARFSGRSAQIAAYLAEQVVNDLDPDTRELLLRTSPLERFNAALADAVRQREDSGRLLAR LEHFHGLLVPLDGEREWFRYHPLFADFLQQLLDREHPGQSVQLHQRAARWFGDHQHLAEAVRHAWRGNCGELAASYIARA GTWQLLLTHGTHEVRALLRHFDHRTIRDTPALNLTQAHLHIRLGEFSHARLLLERFRDFPAALREPLQRDYTVVVALLRD RLDEICGNPHGLTQIAAQAGALDEDDHLGRGMLLCICATTAIAQGAFAVAERYARNARDTMQRGGSDVGASQAMLSLGQS LFYRGRLSDAEACYQQALSWCARTPQLDRVLEAAAQCLLAQSHYERGHHDDAADLLHPALELLEQHDGGMDVLAAGYGTA LGLERVRDHSGRSALLLLEHIEQIAHGRKLARLSELAAAWRLMLLLEHPGNAAIDVLIARTGGESGLAHTLRSPHRWHDR AAMGFALARWHRLAGRSSAALSILGQIEQACLANDNVCHLARTRARIALVLQQRGELVAALPYLYSALDHVALTQSWQAI VELGLPAKAMLRSLRQHDPQTVGGTTRALTIQALLERLSGDDDPAGDIFSERELEVLAQLARGYSNKQIARCLHLSENTV KFHLKNLYRKLDARSREGALAQALQRGLLRGSNQHADQPLQPD
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=368, Percent_Identity=31.7934782608696, Blast_Score=158, Evalue=1e-39, Organism=Escherichia coli, GI1788521, Length=71, Percent_Identity=50.7042253521127, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 101987; Mature: 101987
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS50293 TPR_REGION ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKPVALLTPRPSPSRDPAIPDWLLAGKLEPALPRPAAVVRGALLAALDQAQARPLTLLL CCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE APPGFGKTTLLAQWHAHLSTREQGPVAWLSLDEEDADAARFLGHLALALQNAGADHALCA ECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHH TVLHNRDHDPRDATALLIRALRAAPRRISVILDDYDRLGSSPVDELVLRLIEHSGGRLHL HHHHCCCCCCHHHHHHHHHHHHCCCHHEEHHHHCHHHCCCCCHHHHHHHHHHCCCCEEEE VLATRRVPNLPLARLDLHAQLSRIGSTQLALDNTEAQALLGPHVPTPVVDELRNYTEGWP EEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCHHHHHHHCCCCCCH VALQLARLWLQGDTQRQQEVAARFSGRSAQIAAYLAEQVVNDLDPDTRELLLRTSPLERF HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHH NAALADAVRQREDSGRLLARLEHFHGLLVPLDGEREWFRYHPLFADFLQQLLDREHPGQS HHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCHHHHHHCCHHHHHHHHHHCCCCCCCC VQLHQRAARWFGDHQHLAEAVRHAWRGNCGELAASYIARAGTWQLLLTHGTHEVRALLRH HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH FDHRTIRDTPALNLTQAHLHIRLGEFSHARLLLERFRDFPAALREPLQRDYTVVVALLRD HCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH RLDEICGNPHGLTQIAAQAGALDEDDHLGRGMLLCICATTAIAQGAFAVAERYARNARDT HHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQRGGSDVGASQAMLSLGQSLFYRGRLSDAEACYQQALSWCARTPQLDRVLEAAAQCLLA HHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QSHYERGHHDDAADLLHPALELLEQHDGGMDVLAAGYGTALGLERVRDHSGRSALLLLEH HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHCHHHHHHHHHHHCCCCCHHHHHHHH IEQIAHGRKLARLSELAAAWRLMLLLEHPGNAAIDVLIARTGGESGLAHTLRSPHRWHDR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHCCCHHHHHH AAMGFALARWHRLAGRSSAALSILGQIEQACLANDNVCHLARTRARIALVLQQRGELVAA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHH LPYLYSALDHVALTQSWQAIVELGLPAKAMLRSLRQHDPQTVGGTTRALTIQALLERLSG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC DDDPAGDIFSERELEVLAQLARGYSNKQIARCLHLSENTVKFHLKNLYRKLDARSREGAL CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHH AQALQRGLLRGSNQHADQPLQPD HHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MLKPVALLTPRPSPSRDPAIPDWLLAGKLEPALPRPAAVVRGALLAALDQAQARPLTLLL CCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE APPGFGKTTLLAQWHAHLSTREQGPVAWLSLDEEDADAARFLGHLALALQNAGADHALCA ECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHH TVLHNRDHDPRDATALLIRALRAAPRRISVILDDYDRLGSSPVDELVLRLIEHSGGRLHL HHHHCCCCCCHHHHHHHHHHHHCCCHHEEHHHHCHHHCCCCCHHHHHHHHHHCCCCEEEE VLATRRVPNLPLARLDLHAQLSRIGSTQLALDNTEAQALLGPHVPTPVVDELRNYTEGWP EEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCHHHHHHHCCCCCCH VALQLARLWLQGDTQRQQEVAARFSGRSAQIAAYLAEQVVNDLDPDTRELLLRTSPLERF HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHH NAALADAVRQREDSGRLLARLEHFHGLLVPLDGEREWFRYHPLFADFLQQLLDREHPGQS HHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCHHHHHHCCHHHHHHHHHHCCCCCCCC VQLHQRAARWFGDHQHLAEAVRHAWRGNCGELAASYIARAGTWQLLLTHGTHEVRALLRH HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH FDHRTIRDTPALNLTQAHLHIRLGEFSHARLLLERFRDFPAALREPLQRDYTVVVALLRD HCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH RLDEICGNPHGLTQIAAQAGALDEDDHLGRGMLLCICATTAIAQGAFAVAERYARNARDT HHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQRGGSDVGASQAMLSLGQSLFYRGRLSDAEACYQQALSWCARTPQLDRVLEAAAQCLLA HHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QSHYERGHHDDAADLLHPALELLEQHDGGMDVLAAGYGTALGLERVRDHSGRSALLLLEH HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHCHHHHHHHHHHHCCCCCHHHHHHHH IEQIAHGRKLARLSELAAAWRLMLLLEHPGNAAIDVLIARTGGESGLAHTLRSPHRWHDR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHCCCHHHHHH AAMGFALARWHRLAGRSSAALSILGQIEQACLANDNVCHLARTRARIALVLQQRGELVAA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHH LPYLYSALDHVALTQSWQAIVELGLPAKAMLRSLRQHDPQTVGGTTRALTIQALLERLSG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC DDDPAGDIFSERELEVLAQLARGYSNKQIARCLHLSENTVKFHLKNLYRKLDARSREGAL CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHH AQALQRGLLRGSNQHADQPLQPD HHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA