| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244135
Identifier: 21244135
GI number: 21244135
Start: 4016411
End: 4016854
Strand: Direct
Name: 21244135
Synonym: XAC3410
Alternate gene names: NA
Gene position: 4016411-4016854 (Clockwise)
Preceding gene: 21244134
Following gene: 77748714
Centisome position: 77.6
GC content: 62.16
Gene sequence:
>444_bases ATGAAGTCCGAACCGGACACGTTCTCCATCGATGATCTGGAACGTGTCGGCACCGAGCCGTGGAACGGCGTGCGTAATTA CCAGGCGCGCAACTTCATGCGCGATGGCATGCACGTGGGCGACGGCGTGTTTTTCTATCATTCCAACTGCAAGGTGCCCG GCATCGTCGGCATCGCCAAGGTGGCGAGCGCGGCGTATCCGGACGACACCCAGTTCGACCCGTCCTCCGACTACCACGAT CCCAAGTCCACGCGCGAAGACCCGCGCTGGATGCTGGTGGACGTGGCGTTCGAGCGCAAACTCACACGCACGATTTCGCT GGACGAAATCAAGCAACAGGCCGATGCGCTTGGCGAAGGCTTCCCGCTGATCGCGCGCGGCAACCGCCTGTCGATCCTGC CGGTCACCGCCGCGCAGTGGAAAGTGTTGCTGGCGATGGAATAG
Upstream 100 bases:
>100_bases AAGCATGGGATGTGGCGGTCGACGCCATTTGTACCGAACACGCCACCTTCCTGAAAGACGACACCGTTTCCGAATGACTG CCCGCAAGCGCTACTGGTTG
Downstream 100 bases:
>100_bases CCGTGATCGGGATTGGGCATTGGAGATTGACCCACTGCCCGCCCGCGTTGCACCGCCTTGACGAATCTCGACTCCCCAAT CACGAATCCCGAGCTCTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKSEPDTFSIDDLERVGTEPWNGVRNYQARNFMRDGMHVGDGVFFYHSNCKVPGIVGIAKVASAAYPDDTQFDPSSDYHD PKSTREDPRWMLVDVAFERKLTRTISLDEIKQQADALGEGFPLIARGNRLSILPVTAAQWKVLLAME
Sequences:
>Translated_147_residues MKSEPDTFSIDDLERVGTEPWNGVRNYQARNFMRDGMHVGDGVFFYHSNCKVPGIVGIAKVASAAYPDDTQFDPSSDYHD PKSTREDPRWMLVDVAFERKLTRTISLDEIKQQADALGEGFPLIARGNRLSILPVTAAQWKVLLAME >Mature_147_residues MKSEPDTFSIDDLERVGTEPWNGVRNYQARNFMRDGMHVGDGVFFYHSNCKVPGIVGIAKVASAAYPDDTQFDPSSDYHD PKSTREDPRWMLVDVAFERKLTRTISLDEIKQQADALGEGFPLIARGNRLSILPVTAAQWKVLLAME
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=163, Percent_Identity=44.1717791411043, Blast_Score=132, Evalue=8e-32, Organism=Homo sapiens, GI40806221, Length=163, Percent_Identity=44.1717791411043, Blast_Score=132, Evalue=8e-32, Organism=Homo sapiens, GI7661804, Length=163, Percent_Identity=44.1717791411043, Blast_Score=132, Evalue=8e-32, Organism=Homo sapiens, GI83267859, Length=106, Percent_Identity=47.1698113207547, Blast_Score=106, Evalue=9e-24, Organism=Homo sapiens, GI40806219, Length=106, Percent_Identity=47.1698113207547, Blast_Score=106, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16548; Mature: 16548
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSEPDTFSIDDLERVGTEPWNGVRNYQARNFMRDGMHVGDGVFFYHSNCKVPGIVGIAK CCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHH VASAAYPDDTQFDPSSDYHDPKSTREDPRWMLVDVAFERKLTRTISLDEIKQQADALGEG HHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHCCC FPLIARGNRLSILPVTAAQWKVLLAME CCEEEECCEEEEEEECHHHEEEEEEEC >Mature Secondary Structure MKSEPDTFSIDDLERVGTEPWNGVRNYQARNFMRDGMHVGDGVFFYHSNCKVPGIVGIAK CCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHH VASAAYPDDTQFDPSSDYHDPKSTREDPRWMLVDVAFERKLTRTISLDEIKQQADALGEG HHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHCCC FPLIARGNRLSILPVTAAQWKVLLAME CCEEEECCEEEEEEECHHHEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA