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The map label for this gene is ygfA [C]

Identifier: 21244134

GI number: 21244134

Start: 4015779

End: 4016387

Strand: Direct

Name: ygfA [C]

Synonym: XAC3409

Alternate gene names: 21244134

Gene position: 4015779-4016387 (Clockwise)

Preceding gene: 21244133

Following gene: 21244135

Centisome position: 77.59

GC content: 69.13

Gene sequence:

>609_bases
TTGCGCTGCGAGACACCGATGACCGAGGACCGAGATACGTTGCGCCAGCAGTTGCGCGCACACCGCCGCAGCCTGCCGGC
GGCGCAGCGCCTGGCCGCAGCCGATGCGTTGGCGGAGCGTTTGCTGGCGCTGCCGTTCGCACCGCATGGCGGCGCCGTGG
CCGGCTACTGGGCGATGGATGGGGAAATTGGGTTGCATCGCTGGCAGCTGGCCCTGCCGGCGGGGTTGCGCTACTGCCTG
CCGGTACTGGATGGGCGCGTGCTGCGCTTTGCGCCATGGCGGCCGGGCCAGCCGCTGGTCAGCAATCGCTACGGCATTCC
GGAGCCGGACGTGGCACGCGCCGACACGCTGGCACCGGAGGAGATGGCACTGGTGGTCACGCCGCTGACCGGTTTCGATG
CGGCGTGCCGTCGGCTGGGGATGGGAGGCGGCTGGTATGATCGCAGCTTCGCGTTCCGGCATCGCCAGGCGCCGCCTCCC
TGGCTGGTCGGTGTTGGCTTCGCTGCGCAGCAGGTGCCCGCCCTGCCCTCCGAAGCATGGGATGTGGCGGTCGACGCCAT
TTGTACCGAACACGCCACCTTCCTGAAAGACGACACCGTTTCCGAATGA

Upstream 100 bases:

>100_bases
GTACGGCTCTATCGGCACGCCCGCAGCGCAGGCGCAGCTGCGGCCCGCATCGCACGCACGCTAGGCAGGCGCGTGCGCGC
ATTCGACAATGCGACACCGA

Downstream 100 bases:

>100_bases
CTGCCCGCAAGCGCTACTGGTTGATGAAGTCCGAACCGGACACGTTCTCCATCGATGATCTGGAACGTGTCGGCACCGAG
CCGTGGAACGGCGTGCGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRCETPMTEDRDTLRQQLRAHRRSLPAAQRLAAADALAERLLALPFAPHGGAVAGYWAMDGEIGLHRWQLALPAGLRYCL
PVLDGRVLRFAPWRPGQPLVSNRYGIPEPDVARADTLAPEEMALVVTPLTGFDAACRRLGMGGGWYDRSFAFRHRQAPPP
WLVGVGFAAQQVPALPSEAWDVAVDAICTEHATFLKDDTVSE

Sequences:

>Translated_202_residues
MRCETPMTEDRDTLRQQLRAHRRSLPAAQRLAAADALAERLLALPFAPHGGAVAGYWAMDGEIGLHRWQLALPAGLRYCL
PVLDGRVLRFAPWRPGQPLVSNRYGIPEPDVARADTLAPEEMALVVTPLTGFDAACRRLGMGGGWYDRSFAFRHRQAPPP
WLVGVGFAAQQVPALPSEAWDVAVDAICTEHATFLKDDTVSE
>Mature_202_residues
MRCETPMTEDRDTLRQQLRAHRRSLPAAQRLAAADALAERLLALPFAPHGGAVAGYWAMDGEIGLHRWQLALPAGLRYCL
PVLDGRVLRFAPWRPGQPLVSNRYGIPEPDVARADTLAPEEMALVVTPLTGFDAACRRLGMGGGWYDRSFAFRHRQAPPP
WLVGVGFAAQQVPALPSEAWDVAVDAICTEHATFLKDDTVSE

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=178, Percent_Identity=34.8314606741573, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 22192; Mature: 22192

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCETPMTEDRDTLRQQLRAHRRSLPAAQRLAAADALAERLLALPFAPHGGAVAGYWAMD
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC
GEIGLHRWQLALPAGLRYCLPVLDGRVLRFAPWRPGQPLVSNRYGIPEPDVARADTLAPE
CCCCCEEEEEECHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
EMALVVTPLTGFDAACRRLGMGGGWYDRSFAFRHRQAPPPWLVGVGFAAQQVPALPSEAW
CEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEECCCHHHHCCCCCCHHH
DVAVDAICTEHATFLKDDTVSE
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRCETPMTEDRDTLRQQLRAHRRSLPAAQRLAAADALAERLLALPFAPHGGAVAGYWAMD
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC
GEIGLHRWQLALPAGLRYCLPVLDGRVLRFAPWRPGQPLVSNRYGIPEPDVARADTLAPE
CCCCCEEEEEECHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
EMALVVTPLTGFDAACRRLGMGGGWYDRSFAFRHRQAPPPWLVGVGFAAQQVPALPSEAW
CEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEECCCHHHHCCCCCCHHH
DVAVDAICTEHATFLKDDTVSE
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]