Click here to switch to the map view.

The map label for this gene is ybaC [H]

Identifier: 21244096

GI number: 21244096

Start: 3971920

End: 3972912

Strand: Direct

Name: ybaC [H]

Synonym: XAC3371

Alternate gene names: 21244096

Gene position: 3971920-3972912 (Clockwise)

Preceding gene: 21244093

Following gene: 21244111

Centisome position: 76.74

GC content: 63.34

Gene sequence:

>993_bases
TTGAATGACGCTTGCCGGGTACCCGGCAGTGCCGTACACGAGGCAGGTCTTGTGCAGATCGGAGGCATCCAGCAATGGGT
CACGATCGAGGGCCAGGACTGCCGCAATCCAGTGGTGCTGATCGTCCATGGCGGGCCGGGCAACCCCAACACGCCGTTCG
CGCATCGCCTGTTCGGCAGCTGGACGCGCGATTTCACCATCGTGCAGTGGGACCAACGCGGCTCCGGCAAGACCTACGCG
GCAAGCAAGCCTGCCGACGGAGAGCGGCTGACCATGCGGCGGCTGACCCTGGACGGCAGCGAGGTCGCACGCTATGCCTC
GCAACGGCTGGGCAAACCCAAGCTCATCCTGATGGGCGGATCGTGGGGCTCGGCACTGTCCGTCACTATCGCCAAGGCAA
ATCCGAACCTGTTCCACGCTTATGTCGGCACGGCGCAACTGGTCAATTACCAGGACGACATGGCGTCGAGCTACGCCAAG
ACGCTGAGCCTGGCCCGCGCAGCCAGCGATGCGGATGCGCTCGGCAAGCTGGAGAAGATCGGCCCGCCGCCATGGACAAA
CCCACGCAACTTCGGAGTCCTGAGACGCCTGACGCGCAAATACGAAGCCTTGAGTACCGACCCGGCGCCGGAAGACTGGT
TTACCTTCGCGGCGGAGTACGACACGCCCGACTACCGCGCAGCCTATGAAGCCGGGGAAGACTATTCCTTCCTGCAGTTC
GTCGGGCTGGCAGGCGACGGCATGGGCCCGCAGATCGATCTGCGCACACTCGGGCCGCAGTTCGCCATGCCGGTCTATCT
GATTCAGGGCGAACAGGATCTGGTGACTCCGGCGCAAATCAGCAAAGCCTATTTCGATGGTCTTTCTGCACGGAGCAAGG
AATTTCTCCTGCTGCCACGCACAGGACACGATCCCAATCCGCCAATGATGGCCGCACAGCTGAAGGTGCTGACCAGGATC
CGTGCGGCGGCGCTGGCCAACGACGCGCACTGA

Upstream 100 bases:

>100_bases
GCGCTACGACGCGAATCACATGACAAAATGCTGGGTAGCTATCGCTCTACTGCTGGTGTGCGCGCCGGCAGTGAGTGCTG
CGGCGTCTGGAAAAACGCCC

Downstream 100 bases:

>100_bases
AACACGCAAGGCGTCCGTTGAACGATGACGGACCGCGCATCGCTCACGAAATCCAACAAAAAAGCCGGCTTTCGCCGGCT
TTTTCTTTCAAGCACCACGC

Product: proline imino-peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNDACRVPGSAVHEAGLVQIGGIQQWVTIEGQDCRNPVVLIVHGGPGNPNTPFAHRLFGSWTRDFTIVQWDQRGSGKTYA
ASKPADGERLTMRRLTLDGSEVARYASQRLGKPKLILMGGSWGSALSVTIAKANPNLFHAYVGTAQLVNYQDDMASSYAK
TLSLARAASDADALGKLEKIGPPPWTNPRNFGVLRRLTRKYEALSTDPAPEDWFTFAAEYDTPDYRAAYEAGEDYSFLQF
VGLAGDGMGPQIDLRTLGPQFAMPVYLIQGEQDLVTPAQISKAYFDGLSARSKEFLLLPRTGHDPNPPMMAAQLKVLTRI
RAAALANDAH

Sequences:

>Translated_330_residues
MNDACRVPGSAVHEAGLVQIGGIQQWVTIEGQDCRNPVVLIVHGGPGNPNTPFAHRLFGSWTRDFTIVQWDQRGSGKTYA
ASKPADGERLTMRRLTLDGSEVARYASQRLGKPKLILMGGSWGSALSVTIAKANPNLFHAYVGTAQLVNYQDDMASSYAK
TLSLARAASDADALGKLEKIGPPPWTNPRNFGVLRRLTRKYEALSTDPAPEDWFTFAAEYDTPDYRAAYEAGEDYSFLQF
VGLAGDGMGPQIDLRTLGPQFAMPVYLIQGEQDLVTPAQISKAYFDGLSARSKEFLLLPRTGHDPNPPMMAAQLKVLTRI
RAAALANDAH
>Mature_330_residues
MNDACRVPGSAVHEAGLVQIGGIQQWVTIEGQDCRNPVVLIVHGGPGNPNTPFAHRLFGSWTRDFTIVQWDQRGSGKTYA
ASKPADGERLTMRRLTLDGSEVARYASQRLGKPKLILMGGSWGSALSVTIAKANPNLFHAYVGTAQLVNYQDDMASSYAK
TLSLARAASDADALGKLEKIGPPPWTNPRNFGVLRRLTRKYEALSTDPAPEDWFTFAAEYDTPDYRAAYEAGEDYSFLQF
VGLAGDGMGPQIDLRTLGPQFAMPVYLIQGEQDLVTPAQISKAYFDGLSARSKEFLLLPRTGHDPNPPMMAAQLKVLTRI
RAAALANDAH

Specific function: Probable aminopeptidase [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR002410 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 35969; Mature: 35969

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDACRVPGSAVHEAGLVQIGGIQQWVTIEGQDCRNPVVLIVHGGPGNPNTPFAHRLFGS
CCCCCCCCCHHHHHCCCEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHC
WTRDFTIVQWDQRGSGKTYAASKPADGERLTMRRLTLDGSEVARYASQRLGKPKLILMGG
CCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCEEEEEEC
SWGSALSVTIAKANPNLFHAYVGTAQLVNYQDDMASSYAKTLSLARAASDADALGKLEKI
CCCCEEEEEEEECCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
GPPPWTNPRNFGVLRRLTRKYEALSTDPAPEDWFTFAAEYDTPDYRAAYEAGEDYSFLQF
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCEEEE
VGLAGDGMGPQIDLRTLGPQFAMPVYLIQGEQDLVTPAQISKAYFDGLSARSKEFLLLPR
EEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEC
TGHDPNPPMMAAQLKVLTRIRAAALANDAH
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNDACRVPGSAVHEAGLVQIGGIQQWVTIEGQDCRNPVVLIVHGGPGNPNTPFAHRLFGS
CCCCCCCCCHHHHHCCCEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHC
WTRDFTIVQWDQRGSGKTYAASKPADGERLTMRRLTLDGSEVARYASQRLGKPKLILMGG
CCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCEEEEEEC
SWGSALSVTIAKANPNLFHAYVGTAQLVNYQDDMASSYAKTLSLARAASDADALGKLEKI
CCCCEEEEEEEECCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
GPPPWTNPRNFGVLRRLTRKYEALSTDPAPEDWFTFAAEYDTPDYRAAYEAGEDYSFLQF
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCEEEE
VGLAGDGMGPQIDLRTLGPQFAMPVYLIQGEQDLVTPAQISKAYFDGLSARSKEFLLLPR
EEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEC
TGHDPNPPMMAAQLKVLTRIRAAALANDAH
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969501; 9384377 [H]