| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244012
Identifier: 21244012
GI number: 21244012
Start: 3866134
End: 3867063
Strand: Reverse
Name: 21244012
Synonym: XAC3286
Alternate gene names: NA
Gene position: 3867063-3866134 (Counterclockwise)
Preceding gene: 21244013
Following gene: 21244007
Centisome position: 74.72
GC content: 54.41
Gene sequence:
>930_bases ATGACCGATCAAGCATTGCAGGCGCTACAGGAATTCGACCTCGACAGTGCCGGGGTCCATTTGTGGGTCTTTAAGTCCAG CACGAAGGCGGACCGGTTCTCCGCCAGCTTTGTCCGTATCGACGCCGCTTTAGAAGACGCGTTACGTAACTTTGCTAAGG CGGAAAGGGCAATGATGACCGAGTGGATTCCCTACGGCCACTTGGCTCAGCCCACGGAAAATGGCTGCCTTTCGGTCTCT GCGATCGAGACCGACTTTGCCTTACTTCAGGCGCTAGTGGATCGCCCAGAGCTCGAGCACGCCATCGAAAGCAAGGATCA GCTGAAGAACGCGATAGGCTATCTAGTGAAGTTCTCCCAGGAAGAGCGCGTGTTGTATGCGTTGCGCCGCTCTCCGGCTA CTTGGAAAACCGCATATCGGAGGAAAGGGGTTGTCAATATGCTGTTCCAAAATGGCGAGCTGAGCGCCGTGGAGGGGGTG GATTTCACCTTGGAACCGGGATTCGATCTGTTCGCCTTGGACGAAGCGCTGCTTGTAGGCAACAAACGTGCCTTCGAGTC AATGATGAGGTATCGCGCAGGCTTCGTGAATGCGTTTGGTGAGCTTCAGGACGAGAAGCAGTTCGTATCTCTGTTTACAG ACATGGCTCCTTTGGTCACATATGTCGGCAGCAATGGCACTCATTTGCGTCGCATGGCGGTCATCCAGGAACGCAAGCTC TACGACAATCCGAGGTATTTGGGTGCGCTGCGCGAAGTGTGTGAAAAATACCAATGGGGAGTGCAGTTCGACAAAGACGG ACTGATCATTCCTACCAAGGAAACTGCTGCGGTAATCATGAAGCTACTCTTGGACCAGCGCCTGATCAGCGAGATCACCG CCATTATGTATGACGTGCCAAACGGCCACCGCGTCGACGCGGTTGAGTGA
Upstream 100 bases:
>100_bases GCGGTGCGATCAGGATGGCTCGAGTCTTGAAAAAGGGCCCGCTTGTGCCCAGCATTCAGATGGCGGAAGAGATACAGGAC GTTTATCTAATGAGAGATCC
Downstream 100 bases:
>100_bases TAACCGCAGCCTGAGAGCTTGGCGTGATTAGACAGCGGCAGCCCTCCGGCTCATCGGCTCAGTGGAGTTCCTGGAGGTCA ACCGTCGGCAGTGCAGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTDQALQALQEFDLDSAGVHLWVFKSSTKADRFSASFVRIDAALEDALRNFAKAERAMMTEWIPYGHLAQPTENGCLSVS AIETDFALLQALVDRPELEHAIESKDQLKNAIGYLVKFSQEERVLYALRRSPATWKTAYRRKGVVNMLFQNGELSAVEGV DFTLEPGFDLFALDEALLVGNKRAFESMMRYRAGFVNAFGELQDEKQFVSLFTDMAPLVTYVGSNGTHLRRMAVIQERKL YDNPRYLGALREVCEKYQWGVQFDKDGLIIPTKETAAVIMKLLLDQRLISEITAIMYDVPNGHRVDAVE
Sequences:
>Translated_309_residues MTDQALQALQEFDLDSAGVHLWVFKSSTKADRFSASFVRIDAALEDALRNFAKAERAMMTEWIPYGHLAQPTENGCLSVS AIETDFALLQALVDRPELEHAIESKDQLKNAIGYLVKFSQEERVLYALRRSPATWKTAYRRKGVVNMLFQNGELSAVEGV DFTLEPGFDLFALDEALLVGNKRAFESMMRYRAGFVNAFGELQDEKQFVSLFTDMAPLVTYVGSNGTHLRRMAVIQERKL YDNPRYLGALREVCEKYQWGVQFDKDGLIIPTKETAAVIMKLLLDQRLISEITAIMYDVPNGHRVDAVE >Mature_308_residues TDQALQALQEFDLDSAGVHLWVFKSSTKADRFSASFVRIDAALEDALRNFAKAERAMMTEWIPYGHLAQPTENGCLSVSA IETDFALLQALVDRPELEHAIESKDQLKNAIGYLVKFSQEERVLYALRRSPATWKTAYRRKGVVNMLFQNGELSAVEGVD FTLEPGFDLFALDEALLVGNKRAFESMMRYRAGFVNAFGELQDEKQFVSLFTDMAPLVTYVGSNGTHLRRMAVIQERKLY DNPRYLGALREVCEKYQWGVQFDKDGLIIPTKETAAVIMKLLLDQRLISEITAIMYDVPNGHRVDAVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34992; Mature: 34861
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQALQALQEFDLDSAGVHLWVFKSSTKADRFSASFVRIDAALEDALRNFAKAERAMMT CCHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWIPYGHLAQPTENGCLSVSAIETDFALLQALVDRPELEHAIESKDQLKNAIGYLVKFSQ HCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC EERVLYALRRSPATWKTAYRRKGVVNMLFQNGELSAVEGVDFTLEPGFDLFALDEALLVG HHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCCEEEECCCCEEECCCCCCHHHHHHHHHC NKRAFESMMRYRAGFVNAFGELQDEKQFVSLFTDMAPLVTYVGSNGTHLRRMAVIQERKL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YDNPRYLGALREVCEKYQWGVQFDKDGLIIPTKETAAVIMKLLLDQRLISEITAIMYDVP CCCHHHHHHHHHHHHHHHCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCC NGHRVDAVE CCCCCCCCC >Mature Secondary Structure TDQALQALQEFDLDSAGVHLWVFKSSTKADRFSASFVRIDAALEDALRNFAKAERAMMT CHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWIPYGHLAQPTENGCLSVSAIETDFALLQALVDRPELEHAIESKDQLKNAIGYLVKFSQ HCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC EERVLYALRRSPATWKTAYRRKGVVNMLFQNGELSAVEGVDFTLEPGFDLFALDEALLVG HHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCCEEEECCCCEEECCCCCCHHHHHHHHHC NKRAFESMMRYRAGFVNAFGELQDEKQFVSLFTDMAPLVTYVGSNGTHLRRMAVIQERKL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YDNPRYLGALREVCEKYQWGVQFDKDGLIIPTKETAAVIMKLLLDQRLISEITAIMYDVP CCCHHHHHHHHHHHHHHHCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCC NGHRVDAVE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA