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The map label for this gene is ycgF [C]

Identifier: 21244004

GI number: 21244004

Start: 3858688

End: 3859131

Strand: Reverse

Name: ycgF [C]

Synonym: XAC3278

Alternate gene names: 21244004

Gene position: 3859131-3858688 (Counterclockwise)

Preceding gene: 21244005

Following gene: 21244003

Centisome position: 74.56

GC content: 55.63

Gene sequence:

>444_bases
TTGACAACCGGTCCCCTGCATGCAATTGCCTATGTTAGTGAGGTCCGGCGCCCTTGGACACTGGGGGAGATCGATCGCTT
GTTGGTTTCATCGAGCGCGCTGAACGCGCAGAACGCTATCACTGGCGTGCTGCTCTACGACGGTCAACGATTCTTCCAAT
ACATCGAAGGTGCGCCCGCGCCTCTCCGGGATATCTACGACCGCATTAAACGGTCTAGCCGCCACGACTTGGTTGCTGAG
TTGTATAACGATCAGATCACCGAGCGCTATTTCCCGAACTGGCAGATGGCGTGCCGAAAAGTGCAAACGGGTTCGATCGT
GGAAGTCAGCGCACAACGGTGGAACCGTGCTCGCCTAGCATTAACCGTTGTAGGGGAAAAGCCGAGAGCGATCCAGCATC
TGTTGTCGTTTTGGGAAGGGGCTGAGTTGCTTCTCCCTTCTTGA

Upstream 100 bases:

>100_bases
GGCGCACGATACTGTTGGCTGACCCCGGCACAGGAAAGATGCCGGCAAGCTATGATATGCACGCTAGGAGGCGGACGCAG
ATCGTCTTGAGAGCCTACGA

Downstream 100 bases:

>100_bases
ACAGCATCCTGGCCCCAAAATTTGGGACGCGACGACTAAGACAGTGCAAAAAAATGCCGCCGGCATCTACCGGCGGCTTT
CAAATAAATCAACATTAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Sensors Of Blue Light Using FAD Protein; Sensors Of Blue-Light Using FAD Family; FAD Sensors Of Blue Light Domain-Containing Protein; Bluf Domain Protein

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTTGPLHAIAYVSEVRRPWTLGEIDRLLVSSSALNAQNAITGVLLYDGQRFFQYIEGAPAPLRDIYDRIKRSSRHDLVAE
LYNDQITERYFPNWQMACRKVQTGSIVEVSAQRWNRARLALTVVGEKPRAIQHLLSFWEGAELLLPS

Sequences:

>Translated_147_residues
MTTGPLHAIAYVSEVRRPWTLGEIDRLLVSSSALNAQNAITGVLLYDGQRFFQYIEGAPAPLRDIYDRIKRSSRHDLVAE
LYNDQITERYFPNWQMACRKVQTGSIVEVSAQRWNRARLALTVVGEKPRAIQHLLSFWEGAELLLPS
>Mature_146_residues
TTGPLHAIAYVSEVRRPWTLGEIDRLLVSSSALNAQNAITGVLLYDGQRFFQYIEGAPAPLRDIYDRIKRSSRHDLVAEL
YNDQITERYFPNWQMACRKVQTGSIVEVSAQRWNRARLALTVVGEKPRAIQHLLSFWEGAELLLPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16770; Mature: 16639

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGPLHAIAYVSEVRRPWTLGEIDRLLVSSSALNAQNAITGVLLYDGQRFFQYIEGAPA
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHEEEEEEECCHHHHHHHCCCCC
PLRDIYDRIKRSSRHDLVAELYNDQITERYFPNWQMACRKVQTGSIVEVSAQRWNRARLA
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEHHHHCCCEEEE
LTVVGEKPRAIQHLLSFWEGAELLLPS
EEEECCCCHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure 
TTGPLHAIAYVSEVRRPWTLGEIDRLLVSSSALNAQNAITGVLLYDGQRFFQYIEGAPA
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHEEEEEEECCHHHHHHHCCCCC
PLRDIYDRIKRSSRHDLVAELYNDQITERYFPNWQMACRKVQTGSIVEVSAQRWNRARLA
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEHHHHCCCEEEE
LTVVGEKPRAIQHLLSFWEGAELLLPS
EEEECCCCHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA