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The map label for this gene is yhbQ [C]

Identifier: 21243928

GI number: 21243928

Start: 3769303

End: 3769611

Strand: Direct

Name: yhbQ [C]

Synonym: XAC3202

Alternate gene names: 21243928

Gene position: 3769303-3769611 (Clockwise)

Preceding gene: 21243908

Following gene: 21243929

Centisome position: 72.83

GC content: 67.64

Gene sequence:

>309_bases
ATGGATGCACTCAAGCCCTGGCACCTCTACCTGCTGCTGTGTCGCAACGGCAGCTACTACGCCGGCATTACCAATGATCT
GGAGCGGCGCTTCCAGGCGCATCTGCGCGGCACCGGCGCACGCTACACGCGCGCCAATCCGCCCGTGCAGATGCTCGCCA
GCCACCCCTACCCGGACCGCGCCAGCGCATCACGCGCAGAGTGCGCACTCAAACGCCTGCCGCGTGCGCGCAAACTGGCC
TGGCTGCAGGCGCAGCCGCGCACCGTCCACGAGTCACAACCTGCTGACGCGTCGATCACGCGCGTCTAG

Upstream 100 bases:

>100_bases
TGGTTATTCACTCCTGTGGCGGATCGCGCCTGGCCGGCAGCCGGATAGCCCGTCGCGCAGCCACGCTGCGCAAGCCCAGG
CGAGTGGCGATAATGCGCGG

Downstream 100 bases:

>100_bases
CCGGGAGTTTCCTACGCTGCGCTGCCCTTGATCGCGGAGCCGCGCATGCACTATCAACTGTATTACTGGACCGGCCTGCA
GGGCCGCGGCGAGTTCGTGC

Product: GIY-YIG nuclease superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MDALKPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTRANPPVQMLASHPYPDRASASRAECALKRLPRARKLA
WLQAQPRTVHESQPADASITRV

Sequences:

>Translated_102_residues
MDALKPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTRANPPVQMLASHPYPDRASASRAECALKRLPRARKLA
WLQAQPRTVHESQPADASITRV
>Mature_102_residues
MDALKPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTRANPPVQMLASHPYPDRASASRAECALKRLPRARKLA
WLQAQPRTVHESQPADASITRV

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family

Homologues:

Organism=Escherichia coli, GI1789545, Length=75, Percent_Identity=40, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3202_XANAC (Q8PHP7)

Other databases:

- EMBL:   AE008923
- RefSeq:   NP_643510.1
- ProteinModelPortal:   Q8PHP7
- SMR:   Q8PHP7
- GeneID:   1157273
- GenomeReviews:   AE008923_GR
- KEGG:   xac:XAC3202
- NMPDR:   fig|190486.1.peg.3154
- HOGENOM:   HBG678874
- OMA:   KCKDESL
- ProtClustDB:   PRK00329
- BioCyc:   XAXO190486:XAC3202-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000305

Pfam domain/function: PF01541 GIY-YIG; SSF82771 UvrC_N

EC number: NA

Molecular weight: Translated: 11597; Mature: 11597

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALKPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTRANPPVQMLASHPYPDR
CCCCCCEEEEEEEECCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCC
ASASRAECALKRLPRARKLAWLQAQPRTVHESQPADASITRV
CCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDALKPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTRANPPVQMLASHPYPDR
CCCCCCEEEEEEEECCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCC
ASASRAECALKRLPRARKLAWLQAQPRTVHESQPADASITRV
CCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217