| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243899
Identifier: 21243899
GI number: 21243899
Start: 3732279
End: 3733595
Strand: Reverse
Name: 21243899
Synonym: XAC3173
Alternate gene names: NA
Gene position: 3733595-3732279 (Counterclockwise)
Preceding gene: 21243900
Following gene: 21243898
Centisome position: 72.14
GC content: 60.97
Gene sequence:
>1317_bases ATGAGCCTAACCAGTCAGCAATACGCAGCGCTTGCGTATGACGCATACCAGAAGCCAGATCGGGTGGGACCGAGAAGCCC CATCGTAGATATTGGTGGTGTTCCTTGCAGGCACCTGGACTATATAGACAGGCCTTCAGGTTATCAGGGTGTAATCTATG AGAGGGCCGACACAGGTGAAATGGTAGTTGTCCACCGAGGAAGCGAGTTTGATCGCCAGCCCTTACTGGACGGTGTACTG GCCGATGGTGGGATGGTCGCGACTCGCCACAATGCGCAGGTAGCAGACGCCATCACGTTTACGCAGCGCGCCTTGAAATA TGCAGAGCAGAAGCATCTCAGTACCGGTCTACCAATCCCCGATGTGACGGTTTCAGGCCACTCGCTCGGTGGCAATTTGG CACAAGTTACTGCGCATCACTTCGGCCTTAAGGGGCAGACCTTCGACGCCTACGGCGCGGTCAGTCTGGATCGGCGGATA CCGGAAGGCGGCAGCGATGTGATCAATCACGTCGTGGCCGGCGATGCAGTCAGCGCCGCAAGCCGGCATTATGGTCAAGT CAAGGTCTATGCCACACCGCAGGAAATTGCTGTCTTAAAGGCCGCTGATTACGCCAACGACCCCGATGCCTTGGATGCGC GTGATCCGGTGTCTGCGGCTGTCAAGCTGGGTGAATCGCATCGCATGCATAACTTCCTGCCAGTCGATGGGGCCGGCAAA GCGGATACCTCCGTCTTGGAAGACCCTTCAACGCAGCAGCTCGCTCGGCAGTACGCGCCGATGATCGAGAAGTATCGCGG CGACATCGAGACGCTACGGTCCGGCTTGACGGTGTACTCGCGTGGAATCCCTGGGCTGGCCCGCGATGGGTTCGATCACC TGCGCGGTCCGTTGGAACCGGGAGCAGGGCGTCGGGAGATGGATGCGCCGACCTGGCAGCAGCAGATGCAGCAACTTCAG CAAGACCGCGAGCGCAGCCATGCGCCACAGACCTGGCAGGTGCCGCTCAAGCAGGATGCGCAGGAAGTGCGTGCGGCGTC GCCGACACACGGCGGCAAGCCGTCCTCATTGCAGGAGGACCACAGCGCATTTCTGGACCGCATGTTGGCCGCCGCGCAGA ACGGTGATCGTGATCAGTTCCGTCAGATGACACAGGCCCTGGCCAACGAGCCGCCTGGCCGCGCCTTGCGCGCCGAGGCT GTCGAGGCGGTGAATCAGCAGGAACAGCAGGCGGCCCAGCAGGCGATGCAAGCGCAGCGGCAACAGGCCGAGCTGCAACA GCAAGAAACCATGCGCATCGGCGCGCGCAGTCTGTAG
Upstream 100 bases:
>100_bases AGGACTTCCCGGATACAGGGAAACCATCTGCCGAGAATTACGCTGAGCCAAACCGAAGAAATCTGTTTGTTGTGACTCTC AAAGCAGAGAAGGTTTCTCC
Downstream 100 bases:
>100_bases TGTTATCACCAGCAGGGCAGGACGCACGATGCACACACAAGACCCGATGGAGCTGGTCAGCAAGGCCGCTGCCTTGATGG AGCAGTTCGAGCGTCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSLTSQQYAALAYDAYQKPDRVGPRSPIVDIGGVPCRHLDYIDRPSGYQGVIYERADTGEMVVVHRGSEFDRQPLLDGVL ADGGMVATRHNAQVADAITFTQRALKYAEQKHLSTGLPIPDVTVSGHSLGGNLAQVTAHHFGLKGQTFDAYGAVSLDRRI PEGGSDVINHVVAGDAVSAASRHYGQVKVYATPQEIAVLKAADYANDPDALDARDPVSAAVKLGESHRMHNFLPVDGAGK ADTSVLEDPSTQQLARQYAPMIEKYRGDIETLRSGLTVYSRGIPGLARDGFDHLRGPLEPGAGRREMDAPTWQQQMQQLQ QDRERSHAPQTWQVPLKQDAQEVRAASPTHGGKPSSLQEDHSAFLDRMLAAAQNGDRDQFRQMTQALANEPPGRALRAEA VEAVNQQEQQAAQQAMQAQRQQAELQQQETMRIGARSL
Sequences:
>Translated_438_residues MSLTSQQYAALAYDAYQKPDRVGPRSPIVDIGGVPCRHLDYIDRPSGYQGVIYERADTGEMVVVHRGSEFDRQPLLDGVL ADGGMVATRHNAQVADAITFTQRALKYAEQKHLSTGLPIPDVTVSGHSLGGNLAQVTAHHFGLKGQTFDAYGAVSLDRRI PEGGSDVINHVVAGDAVSAASRHYGQVKVYATPQEIAVLKAADYANDPDALDARDPVSAAVKLGESHRMHNFLPVDGAGK ADTSVLEDPSTQQLARQYAPMIEKYRGDIETLRSGLTVYSRGIPGLARDGFDHLRGPLEPGAGRREMDAPTWQQQMQQLQ QDRERSHAPQTWQVPLKQDAQEVRAASPTHGGKPSSLQEDHSAFLDRMLAAAQNGDRDQFRQMTQALANEPPGRALRAEA VEAVNQQEQQAAQQAMQAQRQQAELQQQETMRIGARSL >Mature_437_residues SLTSQQYAALAYDAYQKPDRVGPRSPIVDIGGVPCRHLDYIDRPSGYQGVIYERADTGEMVVVHRGSEFDRQPLLDGVLA DGGMVATRHNAQVADAITFTQRALKYAEQKHLSTGLPIPDVTVSGHSLGGNLAQVTAHHFGLKGQTFDAYGAVSLDRRIP EGGSDVINHVVAGDAVSAASRHYGQVKVYATPQEIAVLKAADYANDPDALDARDPVSAAVKLGESHRMHNFLPVDGAGKA DTSVLEDPSTQQLARQYAPMIEKYRGDIETLRSGLTVYSRGIPGLARDGFDHLRGPLEPGAGRREMDAPTWQQQMQQLQQ DRERSHAPQTWQVPLKQDAQEVRAASPTHGGKPSSLQEDHSAFLDRMLAAAQNGDRDQFRQMTQALANEPPGRALRAEAV EAVNQQEQQAAQQAMQAQRQQAELQQQETMRIGARSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47790; Mature: 47659
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTSQQYAALAYDAYQKPDRVGPRSPIVDIGGVPCRHLDYIDRPSGYQGVIYERADTGE CCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCEEEEECCCCC MVVVHRGSEFDRQPLLDGVLADGGMVATRHNAQVADAITFTQRALKYAEQKHLSTGLPIP EEEEECCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC DVTVSGHSLGGNLAQVTAHHFGLKGQTFDAYGAVSLDRRIPEGGSDVINHVVAGDAVSAA CEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEHHCCCCCCHHHHHHHHHHCHHHHHH SRHYGQVKVYATPQEIAVLKAADYANDPDALDARDPVSAAVKLGESHRMHNFLPVDGAGK HHCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC ADTSVLEDPSTQQLARQYAPMIEKYRGDIETLRSGLTVYSRGIPGLARDGFDHLRGPLEP CCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHCCCCCHHHCCHHHHCCCCCC GAGRREMDAPTWQQQMQQLQQDRERSHAPQTWQVPLKQDAQEVRAASPTHGGKPSSLQED CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCHHH HSAFLDRMLAAAQNGDRDQFRQMTQALANEPPGRALRAEAVEAVNQQEQQAAQQAMQAQR HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QQAELQQQETMRIGARSL HHHHHHHHHHHHHCCCCC >Mature Secondary Structure SLTSQQYAALAYDAYQKPDRVGPRSPIVDIGGVPCRHLDYIDRPSGYQGVIYERADTGE CCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCEEEEECCCCC MVVVHRGSEFDRQPLLDGVLADGGMVATRHNAQVADAITFTQRALKYAEQKHLSTGLPIP EEEEECCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC DVTVSGHSLGGNLAQVTAHHFGLKGQTFDAYGAVSLDRRIPEGGSDVINHVVAGDAVSAA CEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEHHCCCCCCHHHHHHHHHHCHHHHHH SRHYGQVKVYATPQEIAVLKAADYANDPDALDARDPVSAAVKLGESHRMHNFLPVDGAGK HHCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC ADTSVLEDPSTQQLARQYAPMIEKYRGDIETLRSGLTVYSRGIPGLARDGFDHLRGPLEP CCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHCCCCCHHHCCHHHHCCCCCC GAGRREMDAPTWQQQMQQLQQDRERSHAPQTWQVPLKQDAQEVRAASPTHGGKPSSLQED CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCHHH HSAFLDRMLAAAQNGDRDQFRQMTQALANEPPGRALRAEAVEAVNQQEQQAAQQAMQAQR HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QQAELQQQETMRIGARSL HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA