Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is plcN [H]

Identifier: 21243886

GI number: 21243886

Start: 3712171

End: 3713949

Strand: Direct

Name: plcN [H]

Synonym: XAC3160

Alternate gene names: 21243886

Gene position: 3712171-3713949 (Clockwise)

Preceding gene: 21243885

Following gene: 21243887

Centisome position: 71.73

GC content: 68.18

Gene sequence:

>1779_bases
GTGGATGCGCAACGCGCCTGGGATCACGGCCGGCTCGGCCACTGGGCCGCCGCCAAGCACAACCATGCGCTGGGCTATTA
CCGGCGCGCGGATATCCCGTTCCAGTACGCGCTCGCCGACGCCTTCACCATCTGCGATGCGTACCACGCCGCGATCCAGA
CCGGCACCAATTCCAATCGCGTGTTCCTGTGGACCGGCGGCAACGATCCGCAGGCGCGCGCAGGCGGCCCGGTGATCGGC
AATTCGCACGACAACTTTGCGGAACTGGGCGGTTTTGCCGAGCCGTATCACTGGGGCACCTACGTCCAAGCGCTGCAGCA
CGCCGGTGTGTCCTGGCAGATCTATCAGGACATGGCAGACAACTTCACCGACAACCCATTGGCCGGCTTTGCGGCATTTC
GACAGGCGTACAGCGCCGCGCCCGGACATGATCCGCAACTTCGCGCGCGTGGCGTGAGCACGCGCGGTCTTGCGCTGCTG
CGCGAGGACGTGCTGGGCGGGCGCCTGCCTGCGGTGAGCTACATCATTGCCGATGCGGCCGGCAGCGAGCATCCGGATCC
GTCCAGCCCCGCCCAGGGCGCGGCCTACACCGCACGCGTGCTGGATGCGCTCACAGCCGATCCGGCGGTGTGGAGTCGCA
CCGCCTTGCTGGTGATGTTCGACGAGAACGACGGCTTCTTCGACCATATGCCCCCGCCCGCACCGCCGTCGCCGGATGCA
CGCGCAACTGGCGGATTTGCCGGCGCATCGACGGTTGCCACCGACGACGACTATCACCGCCACCCGGCCCCGGGCGAACA
GAAAGTGGATCTTCCCGAACTGCGCGGGCGGCCCTATGGGCTTGGCCCGCGCGTGCCGATGTATGTGGTCTCGCCATGGA
GCCGCGGCGGCTGGGTGGATTCGCAGGTGTACGACCACACCTCGGTACTGCGTCTGCTCGAACGCCGCTTCGGCGTGCCT
GCGCCGGAGATCACGCCCTGGCGGCGTGCAGTGTGCGGCGACTTGACCAACGCCTTCGATTTCCGCCAGACCGATGCGCG
CCCCTTCGCCGCGGCGCTGCCCGATGTCGGCGCAACCGCAGCGCGCGCAGCAGCCTTGCGCGAGCATGCACTGCCGCCGT
TGCCGGCCACGTTGCAGCCGCCCGAGCAACCGTTCGGCGTGCGCCGCTCGCGCGGGCTGCCGTATCGTCCCAGCGTGGAG
CTGACCTACCTGCCCGAGCGCGGCGAAGTGAACCTCCGCATGGCCAACGCGGGCGCAGCGGCGGTGCTGCATGTCTACGA
CCGCTTCGATCTGGCCGCAATTCCGCGCCGCTATACGGTGGGAAATGACGCCACCGTGGACGGCACGTGGACCACCTACG
ACGGCCGCTACGATCTGTGGCTGCCCGGTCCCAACGGCTTCCATCGTCACTATCGGGGCGATGTGGGTGCACCGCTGCTG
GTGGCCGAGATCGCGCGGGATCCGAACGATTGCACCTGCATGCTGCTATCGCTACGTCACGGCGGCAGCACTGCCGTGCA
GCTTGAGCTGCAGCCAGGTGCATATGCAGCCGCACAGCCGCGCGAGCGCCTGCGCCTTGCACCCGGCATCACCGAGCAGC
GGCGCTGGAAGGCGGCAGCAACCGGCGGCTGGTACGACCTATGGGTGCACCACGACGGCGCGGCCCAGCGTCTGGCCGGG
CGCATCGAAACCGGCGCAGACAGCGTCAGCGACCCGGCCATGGGTGGGCCGGCGCGATTGCAGCAAGAGTTGCCTATCTT
GATAGGCGCACTCGATTAA

Upstream 100 bases:

>100_bases
TGCAACCCAGCGAGGACGGCCGCCAGTGGCTGACGCCGTTTGCGCTGGATACGGCAGCGCAATTCGGCTTCATGCGCGTG
CAAGGCCGCCGCATAGTTGG

Downstream 100 bases:

>100_bases
GAGCGGCTTACACAACGACTGCGCTCTCCGCCACGCGTGCGCGGTCGACGCCAGGTGCCGCATGTCCCACGCGTACACGG
CGGTTCCGAGCGCAACGTTC

Product: phospholipase C

Products: NA

Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]

Number of amino acids: Translated: 592; Mature: 592

Protein sequence:

>592_residues
MDAQRAWDHGRLGHWAAAKHNHALGYYRRADIPFQYALADAFTICDAYHAAIQTGTNSNRVFLWTGGNDPQARAGGPVIG
NSHDNFAELGGFAEPYHWGTYVQALQHAGVSWQIYQDMADNFTDNPLAGFAAFRQAYSAAPGHDPQLRARGVSTRGLALL
REDVLGGRLPAVSYIIADAAGSEHPDPSSPAQGAAYTARVLDALTADPAVWSRTALLVMFDENDGFFDHMPPPAPPSPDA
RATGGFAGASTVATDDDYHRHPAPGEQKVDLPELRGRPYGLGPRVPMYVVSPWSRGGWVDSQVYDHTSVLRLLERRFGVP
APEITPWRRAVCGDLTNAFDFRQTDARPFAAALPDVGATAARAAALREHALPPLPATLQPPEQPFGVRRSRGLPYRPSVE
LTYLPERGEVNLRMANAGAAAVLHVYDRFDLAAIPRRYTVGNDATVDGTWTTYDGRYDLWLPGPNGFHRHYRGDVGAPLL
VAEIARDPNDCTCMLLSLRHGGSTAVQLELQPGAYAAAQPRERLRLAPGITEQRRWKAAATGGWYDLWVHHDGAAQRLAG
RIETGADSVSDPAMGGPARLQQELPILIGALD

Sequences:

>Translated_592_residues
MDAQRAWDHGRLGHWAAAKHNHALGYYRRADIPFQYALADAFTICDAYHAAIQTGTNSNRVFLWTGGNDPQARAGGPVIG
NSHDNFAELGGFAEPYHWGTYVQALQHAGVSWQIYQDMADNFTDNPLAGFAAFRQAYSAAPGHDPQLRARGVSTRGLALL
REDVLGGRLPAVSYIIADAAGSEHPDPSSPAQGAAYTARVLDALTADPAVWSRTALLVMFDENDGFFDHMPPPAPPSPDA
RATGGFAGASTVATDDDYHRHPAPGEQKVDLPELRGRPYGLGPRVPMYVVSPWSRGGWVDSQVYDHTSVLRLLERRFGVP
APEITPWRRAVCGDLTNAFDFRQTDARPFAAALPDVGATAARAAALREHALPPLPATLQPPEQPFGVRRSRGLPYRPSVE
LTYLPERGEVNLRMANAGAAAVLHVYDRFDLAAIPRRYTVGNDATVDGTWTTYDGRYDLWLPGPNGFHRHYRGDVGAPLL
VAEIARDPNDCTCMLLSLRHGGSTAVQLELQPGAYAAAQPRERLRLAPGITEQRRWKAAATGGWYDLWVHHDGAAQRLAG
RIETGADSVSDPAMGGPARLQQELPILIGALD
>Mature_592_residues
MDAQRAWDHGRLGHWAAAKHNHALGYYRRADIPFQYALADAFTICDAYHAAIQTGTNSNRVFLWTGGNDPQARAGGPVIG
NSHDNFAELGGFAEPYHWGTYVQALQHAGVSWQIYQDMADNFTDNPLAGFAAFRQAYSAAPGHDPQLRARGVSTRGLALL
REDVLGGRLPAVSYIIADAAGSEHPDPSSPAQGAAYTARVLDALTADPAVWSRTALLVMFDENDGFFDHMPPPAPPSPDA
RATGGFAGASTVATDDDYHRHPAPGEQKVDLPELRGRPYGLGPRVPMYVVSPWSRGGWVDSQVYDHTSVLRLLERRFGVP
APEITPWRRAVCGDLTNAFDFRQTDARPFAAALPDVGATAARAAALREHALPPLPATLQPPEQPFGVRRSRGLPYRPSVE
LTYLPERGEVNLRMANAGAAAVLHVYDRFDLAAIPRRYTVGNDATVDGTWTTYDGRYDLWLPGPNGFHRHYRGDVGAPLL
VAEIARDPNDCTCMLLSLRHGGSTAVQLELQPGAYAAAQPRERLRLAPGITEQRRWKAAATGGWYDLWVHHDGAAQRLAG
RIETGADSVSDPAMGGPARLQQELPILIGALD

Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]

COG id: COG3511

COG function: function code M; Phospholipase C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial phospholipase C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007312
- InterPro:   IPR008475
- InterPro:   IPR017767
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]

EC number: =3.1.4.3 [H]

Molecular weight: Translated: 64294; Mature: 64294

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAQRAWDHGRLGHWAAAKHNHALGYYRRADIPFQYALADAFTICDAYHAAIQTGTNSNR
CCCCCCCCCCCCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
VFLWTGGNDPQARAGGPVIGNSHDNFAELGGFAEPYHWGTYVQALQHAGVSWQIYQDMAD
EEEEECCCCCCCCCCCCEECCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHC
NFTDNPLAGFAAFRQAYSAAPGHDPQLRARGVSTRGLALLREDVLGGRLPAVSYIIADAA
CCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHEEEECCC
GSEHPDPSSPAQGAAYTARVLDALTADPAVWSRTALLVMFDENDGFFDHMPPPAPPSPDA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
RATGGFAGASTVATDDDYHRHPAPGEQKVDLPELRGRPYGLGPRVPMYVVSPWSRGGWVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCC
SQVYDHTSVLRLLERRFGVPAPEITPWRRAVCGDLTNAFDFRQTDARPFAAALPDVGATA
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHH
ARAAALREHALPPLPATLQPPEQPFGVRRSRGLPYRPSVELTYLPERGEVNLRMANAGAA
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCE
AVLHVYDRFDLAAIPRRYTVGNDATVDGTWTTYDGRYDLWLPGPNGFHRHYRGDVGAPLL
EEEEHHHHCCHHHCCCEEECCCCCEECCEEEEECCEEEEEECCCCCCHHHCCCCCCCCHH
VAEIARDPNDCTCMLLSLRHGGSTAVQLELQPGAYAAAQPRERLRLAPGITEQRRWKAAA
HHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCHHHHEEHCC
TGGWYDLWVHHDGAAQRLAGRIETGADSVSDPAMGGPARLQQELPILIGALD
CCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEECC
>Mature Secondary Structure
MDAQRAWDHGRLGHWAAAKHNHALGYYRRADIPFQYALADAFTICDAYHAAIQTGTNSNR
CCCCCCCCCCCCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
VFLWTGGNDPQARAGGPVIGNSHDNFAELGGFAEPYHWGTYVQALQHAGVSWQIYQDMAD
EEEEECCCCCCCCCCCCEECCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHC
NFTDNPLAGFAAFRQAYSAAPGHDPQLRARGVSTRGLALLREDVLGGRLPAVSYIIADAA
CCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHEEEECCC
GSEHPDPSSPAQGAAYTARVLDALTADPAVWSRTALLVMFDENDGFFDHMPPPAPPSPDA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
RATGGFAGASTVATDDDYHRHPAPGEQKVDLPELRGRPYGLGPRVPMYVVSPWSRGGWVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCC
SQVYDHTSVLRLLERRFGVPAPEITPWRRAVCGDLTNAFDFRQTDARPFAAALPDVGATA
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHH
ARAAALREHALPPLPATLQPPEQPFGVRRSRGLPYRPSVELTYLPERGEVNLRMANAGAA
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCE
AVLHVYDRFDLAAIPRRYTVGNDATVDGTWTTYDGRYDLWLPGPNGFHRHYRGDVGAPLL
EEEEHHHHCCHHHCCCEEECCCCCEECCEEEEECCEEEEEECCCCCCHHHCCCCCCCCHH
VAEIARDPNDCTCMLLSLRHGGSTAVQLELQPGAYAAAQPRERLRLAPGITEQRRWKAAA
HHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCHHHHEEHCC
TGGWYDLWVHHDGAAQRLAGRIETGADSVSDPAMGGPARLQQELPILIGALD
CCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2120196; 10984043 [H]