| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is pilG [H]
Identifier: 21243829
GI number: 21243829
Start: 3645440
End: 3645841
Strand: Reverse
Name: pilG [H]
Synonym: XAC3102
Alternate gene names: 21243829
Gene position: 3645841-3645440 (Counterclockwise)
Preceding gene: 21243832
Following gene: 21243828
Centisome position: 70.44
GC content: 56.47
Gene sequence:
>402_bases ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGATGACTCGAAAACCATTCGCCG CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCACGCGGCCGCAT CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT GA
Upstream 100 bases:
>100_bases GGCAATGCGCCCTTGACAGTCGATGCGGGTCTTGGGATATACATGCAGTTTCGTAGCGACGTCGGAAGGGATGAAGCGTC GCGCGCCCGGGGATATTTGC
Downstream 100 bases:
>100_bases CCAGGGGGAAAGGCAACATGGCTCGAATTATATTGATCGAGGACTCGCCCACCGACAGGGCAGTCTTCAGTCAATGGCTG GAAAAAGCAGGCCATACGGT
Product: pilus protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA
Sequences:
>Translated_133_residues MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA >Mature_132_residues SENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKG NQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA
Specific function: Is involved in pilus biosynthesis and twitching motility. May act as a single-domain response regulator whose function may be to receive a certain environmental signal(s) and then transduce that signal to the pilus assembly machinery via specific protein-
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=114, Percent_Identity=29.8245614035088, Blast_Score=70, Evalue=7e-14, Organism=Escherichia coli, GI87082012, Length=115, Percent_Identity=31.304347826087, Blast_Score=68, Evalue=2e-13, Organism=Escherichia coli, GI2367329, Length=114, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=28.4403669724771, Blast_Score=61, Evalue=3e-11, Organism=Escherichia coli, GI1790860, Length=114, Percent_Identity=27.1929824561404, Blast_Score=59, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 14667; Mature: 14536
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQI CCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCE IFVDIMMPRLDGYQTCALIKGNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTR EEEEEEECCCCCCEEEEEEECCEEECCCCEEEEECCCCCCHHCCCCEECCHHHHCCCCCH EELLSAIRTYVHA HHHHHHHHHHHCC >Mature Secondary Structure SENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQI CCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCE IFVDIMMPRLDGYQTCALIKGNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTR EEEEEEECCCCCCEEEEEEECCEEECCCCEEEEECCCCCCHHCCCCEECCHHHHCCCCCH EELLSAIRTYVHA HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8104179; 10984043 [H]