| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243778
Identifier: 21243778
GI number: 21243778
Start: 3570817
End: 3572373
Strand: Reverse
Name: 21243778
Synonym: XAC3051
Alternate gene names: NA
Gene position: 3572373-3570817 (Counterclockwise)
Preceding gene: 21243779
Following gene: 21243774
Centisome position: 69.02
GC content: 53.31
Gene sequence:
>1557_bases ATGACTGAAGCGGTTGAGTTGTATAAAGCTGGAGCGGCGGCGCTGGTGCGGCGTGACTTCGATCAGGCTCAGGTTTTCTT CTCAAGGGCATCTCAACTTGATCCTGGTTCTGCCGAGAACGTGATAGGGCTTTCACTTACGGCTTCCGCTCTGGGGGCGC ATAGGCTTGCCAAAAGTCACGCGCTGTCGGCGACATCGTTGAGGGTTGATGGTGGCTCAGTTGCCGTGAATGTTGCTAGG CGCCTGAGCTACTTCAATGAGTATAGTGCGTTGGTCGAATTTGTAGAGAATCGCCTCGCAGAGAATCCCTTGTCGCCCAT CCAGTTGGCGGAGATAGCGGTCCTGCTTAGTGGTATCGGCGACCAAGACAATGCAATGCGGTTGGTTGATCAAGCGCTTC TCGCCGATCCTAAGCACGTGCCGTCCATCTATTTCAAAGGGAATTTGCTTTCCTTCATGGGCGACGCAAAGGGAGCGGAG CTTGCGTACGAGCATGCGCTGAGCATTGATGGGGGGTATTTGCAGGCATCTTGGATGTTGTCAGGACTCAGGCTGCAGAC GGCGCAGAGCAATCACATAGATCGTCTGCGTTCCCAGCTCGTTCGCTGCAGGGCTGGAAGTCTTGGTGAGGCGTATCTCC GGTATGCCTTGCACAAGGAGTTACACGATTTGACAGAGTATAAGCTCGCATGGGCTGAGCTTGAGCGCGCCAACCAGGTG ATGCGCTCGCTTGTAAATTACCGCGAGAGCGAATCTGCAATGCTCATTGATGAGCTGCTGAGAAAATTCTCCGAGCGGAG TTTGAAAGTGCGGTCAGTGGTCGAGCAGGATTGCCTTCCCATTTTTGTTGTAGGTCTACATAGAAGCGGTACAACATTAT TGGAAAGGATGCTTTCGGGACATGCCGAGTTGGCTGCAGCCGGGGAAACATATTCGTTTCCCGAGCAGCTTCGTCACGTT GTGGATCACTATGCACGTGACGCTGTAGATCTAACCATCGCCCAAAAATTTTCCGATAGTCATCTTGATGCCATTGCAAC CGGCTATCGACGAACAGTGCCTTGGATGGCGAAGGGGAGCCGCGGATATGTTGAGAAATTGCCGGCAAATTTCTTGAACG TACCAATGATCGCGAAATGTTTGCCCTCTGCCAAAATTATCTGCATCGAGCGAGACCCGATGGATGTGTGTTTCTCGAAC TTGAGGCTGCTCTTTTCGGGGGTGGCCAATTATTCTTATCGACAGGATGAGCTTGCCCGGTTTCATTGCCGCTATCAGGC GCTAGTGAAGCATTGGGACCTCATCGCAAGCGACGTCTTCATGCGGATTAGATATTCAGATCTGGTTGCTGAGCCTGAAG CGACCCTTCGACACGTCATGGAGTTTTGTGGAATGACCTTTCAGTCGGGGATGCTGGACGTTGGGATCGGCAAGCAGGCG GTGTCAACTGCCAGCGTCGCGTCGGTACGGGCCGGTATTTCGCCGGATCGAGGTGGCGTGTGGCGGAACTATTCTTCTTG GCTAGAGCCGCTCAGGTCCATTGTCGCCGAAGGCTAA
Upstream 100 bases:
>100_bases TGCGTATCTAATTACTGCTAATAGTTATGTTAAAGCGTGCTCCAAATACTACAGCCTCACATTGCTCTTTCCTCGGATGA GCACTCTCCAAAGGTGATGC
Downstream 100 bases:
>100_bases AAGTTAGACAAAAAAAACAGCCCCAAACGGGGCTGTTTTTCTTGGGGCGGTTTCTCTTAGAACTTCTGACGGTACTGCAT GTACAGGAAACGCCCCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MTEAVELYKAGAAALVRRDFDQAQVFFSRASQLDPGSAENVIGLSLTASALGAHRLAKSHALSATSLRVDGGSVAVNVAR RLSYFNEYSALVEFVENRLAENPLSPIQLAEIAVLLSGIGDQDNAMRLVDQALLADPKHVPSIYFKGNLLSFMGDAKGAE LAYEHALSIDGGYLQASWMLSGLRLQTAQSNHIDRLRSQLVRCRAGSLGEAYLRYALHKELHDLTEYKLAWAELERANQV MRSLVNYRESESAMLIDELLRKFSERSLKVRSVVEQDCLPIFVVGLHRSGTTLLERMLSGHAELAAAGETYSFPEQLRHV VDHYARDAVDLTIAQKFSDSHLDAIATGYRRTVPWMAKGSRGYVEKLPANFLNVPMIAKCLPSAKIICIERDPMDVCFSN LRLLFSGVANYSYRQDELARFHCRYQALVKHWDLIASDVFMRIRYSDLVAEPEATLRHVMEFCGMTFQSGMLDVGIGKQA VSTASVASVRAGISPDRGGVWRNYSSWLEPLRSIVAEG
Sequences:
>Translated_518_residues MTEAVELYKAGAAALVRRDFDQAQVFFSRASQLDPGSAENVIGLSLTASALGAHRLAKSHALSATSLRVDGGSVAVNVAR RLSYFNEYSALVEFVENRLAENPLSPIQLAEIAVLLSGIGDQDNAMRLVDQALLADPKHVPSIYFKGNLLSFMGDAKGAE LAYEHALSIDGGYLQASWMLSGLRLQTAQSNHIDRLRSQLVRCRAGSLGEAYLRYALHKELHDLTEYKLAWAELERANQV MRSLVNYRESESAMLIDELLRKFSERSLKVRSVVEQDCLPIFVVGLHRSGTTLLERMLSGHAELAAAGETYSFPEQLRHV VDHYARDAVDLTIAQKFSDSHLDAIATGYRRTVPWMAKGSRGYVEKLPANFLNVPMIAKCLPSAKIICIERDPMDVCFSN LRLLFSGVANYSYRQDELARFHCRYQALVKHWDLIASDVFMRIRYSDLVAEPEATLRHVMEFCGMTFQSGMLDVGIGKQA VSTASVASVRAGISPDRGGVWRNYSSWLEPLRSIVAEG >Mature_517_residues TEAVELYKAGAAALVRRDFDQAQVFFSRASQLDPGSAENVIGLSLTASALGAHRLAKSHALSATSLRVDGGSVAVNVARR LSYFNEYSALVEFVENRLAENPLSPIQLAEIAVLLSGIGDQDNAMRLVDQALLADPKHVPSIYFKGNLLSFMGDAKGAEL AYEHALSIDGGYLQASWMLSGLRLQTAQSNHIDRLRSQLVRCRAGSLGEAYLRYALHKELHDLTEYKLAWAELERANQVM RSLVNYRESESAMLIDELLRKFSERSLKVRSVVEQDCLPIFVVGLHRSGTTLLERMLSGHAELAAAGETYSFPEQLRHVV DHYARDAVDLTIAQKFSDSHLDAIATGYRRTVPWMAKGSRGYVEKLPANFLNVPMIAKCLPSAKIICIERDPMDVCFSNL RLLFSGVANYSYRQDELARFHCRYQALVKHWDLIASDVFMRIRYSDLVAEPEATLRHVMEFCGMTFQSGMLDVGIGKQAV STASVASVRAGISPDRGGVWRNYSSWLEPLRSIVAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 - InterPro: IPR001440 - InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 57483; Mature: 57352
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAVELYKAGAAALVRRDFDQAQVFFSRASQLDPGSAENVIGLSLTASALGAHRLAKSH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH ALSATSLRVDGGSVAVNVARRLSYFNEYSALVEFVENRLAENPLSPIQLAEIAVLLSGIG CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC DQDNAMRLVDQALLADPKHVPSIYFKGNLLSFMGDAKGAELAYEHALSIDGGYLQASWML CCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHCCCCCCHHHHHHHHCCCCCEEEHHHHH SGLRLQTAQSNHIDRLRSQLVRCRAGSLGEAYLRYALHKELHDLTEYKLAWAELERANQV CCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRSLVNYRESESAMLIDELLRKFSERSLKVRSVVEQDCLPIFVVGLHRSGTTLLERMLSG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCC HAELAAAGETYSFPEQLRHVVDHYARDAVDLTIAQKFSDSHLDAIATGYRRTVPWMAKGS CHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHCCCCCCCCC RGYVEKLPANFLNVPMIAKCLPSAKIICIERDPMDVCFSNLRLLFSGVANYSYRQDELAR CCHHHHCCHHHCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHH FHCRYQALVKHWDLIASDVFMRIRYSDLVAEPEATLRHVMEFCGMTFQSGMLDVGIGKQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCEEECCCHHH VSTASVASVRAGISPDRGGVWRNYSSWLEPLRSIVAEG HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TEAVELYKAGAAALVRRDFDQAQVFFSRASQLDPGSAENVIGLSLTASALGAHRLAKSH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH ALSATSLRVDGGSVAVNVARRLSYFNEYSALVEFVENRLAENPLSPIQLAEIAVLLSGIG CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC DQDNAMRLVDQALLADPKHVPSIYFKGNLLSFMGDAKGAELAYEHALSIDGGYLQASWML CCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHCCCCCCHHHHHHHHCCCCCEEEHHHHH SGLRLQTAQSNHIDRLRSQLVRCRAGSLGEAYLRYALHKELHDLTEYKLAWAELERANQV CCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRSLVNYRESESAMLIDELLRKFSERSLKVRSVVEQDCLPIFVVGLHRSGTTLLERMLSG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCC HAELAAAGETYSFPEQLRHVVDHYARDAVDLTIAQKFSDSHLDAIATGYRRTVPWMAKGS CHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHCCCCCCCCC RGYVEKLPANFLNVPMIAKCLPSAKIICIERDPMDVCFSNLRLLFSGVANYSYRQDELAR CCHHHHCCHHHCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHH FHCRYQALVKHWDLIASDVFMRIRYSDLVAEPEATLRHVMEFCGMTFQSGMLDVGIGKQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCEEECCCHHH VSTASVASVRAGISPDRGGVWRNYSSWLEPLRSIVAEG HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]