| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is atsA [H]
Identifier: 21243721
GI number: 21243721
Start: 3500669
End: 3501601
Strand: Direct
Name: atsA [H]
Synonym: XAC2994
Alternate gene names: 21243721
Gene position: 3500669-3501601 (Clockwise)
Preceding gene: 21243720
Following gene: 21243728
Centisome position: 67.64
GC content: 64.31
Gene sequence:
>933_bases GTGGGGCAGCTCGGCGCTGCGGCACGTCCCCCGGCACGACAAACATCTTCCCAGCCCGGCCCCGCGCCGACTGCACCCTT TCCGACCAAGGGCAGCGTGCTGGTGCTGCTGGGCACCAAGGGTGGCCCGACACCCTCGCCATTGCGGGCGGCGGCCGCCA ATGCCTTGGTCATCGACGGGCAACCGTATCTCGTCGATTGCGGCAACGGCGTGGCGCAGCAACTGGCCAAGGCTGGCATT GGGCTGCCCATGCTGCGCGGTATCTTTCTGACCCACCACCACTCCGACCACAACGCCGATCTGCTCAACGTGGTGTGGCT GGCCTGGGCCAGTGGCCTGCAGACGCCGGTGCATCTGTATGGACCACCCGGCATCGCCAGGATGGTGGATGCCTTCGTCG CGATGAATGCCATCGACATCCAGGCACGCATCCGTGAGGAAGGCCGTCCGCCGTTCGAAGCGCTCATTCATGTGCATGAG TTCGACCAGCCCGGTACCGTCCTGACGAACGATCAGGTCACCGTCACTGCCACCTTGGTGGACCATTACACCCTCAAGCC GGCCTTTGCCTACCGGTTCGAGGCGCCCGACCGCAGCGTGGTGTTCTCCGGCGATACGCGCTACCTGCCCGCGCTGGCCG AGTTCGCCAAGAACACCGACGTGCTGGTCCACGAAGTGATGTATCTGCCAGCACTGCAAAGGATGCTGAAAACCAACGAC AACGCGCCGACATTGCTCGACCATCTGCTCAAGAGCCACTCCACCAGCGAAGAGGTCGGCATGATTGCGGCTGCGGCCAA CGCGAAGATGCTCGTGCTCAATCACTTCGTCCCCGGGGGCGATGCGTCCATCACCGATGCGATGTGGAGCCAAGGCGCGC GCAAGCATTACGCCGGGCCGATCGTGGTGGGCAAGGATCTGATGCGGCTGTAG
Upstream 100 bases:
>100_bases CCCACGCACATCGACACGAGCCGCAATGACCGCATCTCATCCCTCCCGTTCCCGTCGCACGCTGCTACGCACTGCATTAG CTGCGAGTGCGCTGACTGCG
Downstream 100 bases:
>100_bases CACGGGCGCGCACTGCGCCCGCCCGCAGCGATTCAATGCGGCGCCAGAGCGTGTTATGTCCGTTGAGGTGGGTGCGAAGC GTCCTGTGCCGCGTCGCGAC
Product: hydrolase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MGQLGAAARPPARQTSSQPGPAPTAPFPTKGSVLVLLGTKGGPTPSPLRAAAANALVIDGQPYLVDCGNGVAQQLAKAGI GLPMLRGIFLTHHHSDHNADLLNVVWLAWASGLQTPVHLYGPPGIARMVDAFVAMNAIDIQARIREEGRPPFEALIHVHE FDQPGTVLTNDQVTVTATLVDHYTLKPAFAYRFEAPDRSVVFSGDTRYLPALAEFAKNTDVLVHEVMYLPALQRMLKTND NAPTLLDHLLKSHSTSEEVGMIAAAANAKMLVLNHFVPGGDASITDAMWSQGARKHYAGPIVVGKDLMRL
Sequences:
>Translated_310_residues MGQLGAAARPPARQTSSQPGPAPTAPFPTKGSVLVLLGTKGGPTPSPLRAAAANALVIDGQPYLVDCGNGVAQQLAKAGI GLPMLRGIFLTHHHSDHNADLLNVVWLAWASGLQTPVHLYGPPGIARMVDAFVAMNAIDIQARIREEGRPPFEALIHVHE FDQPGTVLTNDQVTVTATLVDHYTLKPAFAYRFEAPDRSVVFSGDTRYLPALAEFAKNTDVLVHEVMYLPALQRMLKTND NAPTLLDHLLKSHSTSEEVGMIAAAANAKMLVLNHFVPGGDASITDAMWSQGARKHYAGPIVVGKDLMRL >Mature_309_residues GQLGAAARPPARQTSSQPGPAPTAPFPTKGSVLVLLGTKGGPTPSPLRAAAANALVIDGQPYLVDCGNGVAQQLAKAGIG LPMLRGIFLTHHHSDHNADLLNVVWLAWASGLQTPVHLYGPPGIARMVDAFVAMNAIDIQARIREEGRPPFEALIHVHEF DQPGTVLTNDQVTVTATLVDHYTLKPAFAYRFEAPDRSVVFSGDTRYLPALAEFAKNTDVLVHEVMYLPALQRMLKTNDN APTLLDHLLKSHSTSEEVGMIAAAANAKMLVLNHFVPGGDASITDAMWSQGARKHYAGPIVVGKDLMRL
Specific function: May function as a glycosulphohydrolase involved with desulfation of sulfated polysaccharides [H]
COG id: COG1234
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the atsA family [H]
Homologues:
Organism=Escherichia coli, GI87082078, Length=283, Percent_Identity=24.0282685512367, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 33161; Mature: 33029
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQLGAAARPPARQTSSQPGPAPTAPFPTKGSVLVLLGTKGGPTPSPLRAAAANALVIDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCEEEECC QPYLVDCGNGVAQQLAKAGIGLPMLRGIFLTHHHSDHNADLLNVVWLAWASGLQTPVHLY CCEEEECCCHHHHHHHHCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE GPPGIARMVDAFVAMNAIDIQARIREEGRPPFEALIHVHEFDQPGTVLTNDQVTVTATLV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEHHCCCCCCCEEECCCEEEEEEEE DHYTLKPAFAYRFEAPDRSVVFSGDTRYLPALAEFAKNTDVLVHEVMYLPALQRMLKTND CCEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC NAPTLLDHLLKSHSTSEEVGMIAAAANAKMLVLNHFVPGGDASITDAMWSQGARKHYAGP CCHHHHHHHHHHCCCCHHHHEEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHCCCC IVVGKDLMRL EEECHHHHCC >Mature Secondary Structure GQLGAAARPPARQTSSQPGPAPTAPFPTKGSVLVLLGTKGGPTPSPLRAAAANALVIDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCEEEECC QPYLVDCGNGVAQQLAKAGIGLPMLRGIFLTHHHSDHNADLLNVVWLAWASGLQTPVHLY CCEEEECCCHHHHHHHHCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE GPPGIARMVDAFVAMNAIDIQARIREEGRPPFEALIHVHEFDQPGTVLTNDQVTVTATLV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEHHCCCCCCCEEECCCEEEEEEEE DHYTLKPAFAYRFEAPDRSVVFSGDTRYLPALAEFAKNTDVLVHEVMYLPALQRMLKTND CCEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC NAPTLLDHLLKSHSTSEEVGMIAAAANAKMLVLNHFVPGGDASITDAMWSQGARKHYAGP CCHHHHHHHHHHCCCCHHHHEEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHCCCC IVVGKDLMRL EEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8535517 [H]