| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is prpL [H]
Identifier: 21243719
GI number: 21243719
Start: 3498258
End: 3499655
Strand: Direct
Name: prpL [H]
Synonym: XAC2992
Alternate gene names: 21243719
Gene position: 3498258-3499655 (Clockwise)
Preceding gene: 21243718
Following gene: 21243720
Centisome position: 67.59
GC content: 63.16
Gene sequence:
>1398_bases ATGAATCGCAAGAACGCGATGTATCTGGCGTTGTTTTCCGCTATTTCCGGCACCGCAGCGGCCGCTCCACCGACCGAGAT GGATGCAGCGCCGGTCACCACCGCGCCGCAGGCGGCCAAGCTTGGTGCGGCAACGTTGCAATCGGCGAGTTTACGCGGCG GCGTTCTGCCCACGCGCGTGGTGCAACTTGCCGCACCCACCAGTGCCGAGATCGGCCGTGTGCGCGAGCGTCGCATTGCG CAGGTCAAGCAGGGGCAGCCGTTGCAGATCGGTTTTTCGCGTGCAGTCGCACAGCCGACGGTGAACCTGTCCAGGCTCGA TTGGCAGATGGCTCCCGATGGCTCGCGCGTGGCCAGCCTCAAAGTCAGTTCCGCACAGGCGGCATCGTTGCGTGCATCGC TGATCCTGCGTGGCGCCGGTGCAACGCCTGGCGACCCGTCCAAGGCGACGCTGCGCTTTGCCGGCAACGATGGTCGCGTG TTCGAGCAATCCGGCGCCAGCTTTGCTGCCAGCGGCAACGATATCGGGTGGTCGCCGACGGTGAGTGGCGAGGACCTGCT GGTCGAACTGTCGCTGCCGGCCGGGCTGTATCCGGAGAACTTCAGCCTCAGCATCCCGCAGCTGTCGCATCTGGATATCA GCCCCACTGCCAGCCCGCGCGACATGATGACCATTGCCATCGGCGAAAGCGATTCCTGTCAGAACGATATCGTCTGCCGT GCCAACCCCACGACCGGCTTTACCAGCGCCGCAAAGGCAGTGGCGCGCATGGTGTTCACCACCAGCCAGGGCTCGTTCCT GTGCACCGGCACCCTGCTCAACAATACCAATTCGCCCAAACGCAACCTGTTCTGGACTGCGGCGCATTGCATCAGCACGC AGACCGTGGCCAACACGCTGCAGACATACTGGTTCTACGATGCGGCCAGCTGCAATGGCAGTACGGTCAGCTCGCAGGCA ACCACACTGACGGGCGGCGCATTCCTGCGGCATGCCAACACCACGCGCGACACCGCATTGCTGGAGCTGAAGACCGCACC GCCAAGCGGCGCATTCTACGCAGCGTGGAATAGCGCGGCGATCGGTTCTACCGGTACTTCGATTGTCGGCATCCATCACC CATCGGGCGACGTCAAGAAGTATTCGCTGGGTACGGTGAATGCGCTGAGCAGCTCCATCGATGGCAAGAGCCCGCTCTAT CGTGTGGTCTGGAACGACGGTGTCACCGAAGGCGGCTCGTCCGGCTCGGGCCTGTTCACCATCGCCAGCGGTGGCGCCTA CCAGCTGCGTGGCGGCCTGTATGGCGGCTATTCGTTCTGCAGCGCGCAGACCGATCCGGATTACTACTCGCGCTTCTCGG ACGTGTATTCCACCATTTCTACCTACTTCGGCCAGTAA
Upstream 100 bases:
>100_bases CATCTTTGAACTTCCGCTAGGCTCGTTCGGCGCCAACGATGGCGCCCGCTTGTTGCAGCCCCCGCTGCAGCCTGACGATC CCTGACGAGAAGGACTACCC
Downstream 100 bases:
>100_bases GCGGCCAAGCCGCGTGGCAGGCGATGTTGCGCCTGCCACGCTTGATCGCGCTTGTTCCGGCAATCCGTTTGCCGGGCGAG GCGTCTACGGTTCAGCGATG
Product: endoproteinase ArgC
Products: NA
Alternate protein names: Protease IV; pvdS-regulated endoprotease [H]
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MNRKNAMYLALFSAISGTAAAAPPTEMDAAPVTTAPQAAKLGAATLQSASLRGGVLPTRVVQLAAPTSAEIGRVRERRIA QVKQGQPLQIGFSRAVAQPTVNLSRLDWQMAPDGSRVASLKVSSAQAASLRASLILRGAGATPGDPSKATLRFAGNDGRV FEQSGASFAASGNDIGWSPTVSGEDLLVELSLPAGLYPENFSLSIPQLSHLDISPTASPRDMMTIAIGESDSCQNDIVCR ANPTTGFTSAAKAVARMVFTTSQGSFLCTGTLLNNTNSPKRNLFWTAAHCISTQTVANTLQTYWFYDAASCNGSTVSSQA TTLTGGAFLRHANTTRDTALLELKTAPPSGAFYAAWNSAAIGSTGTSIVGIHHPSGDVKKYSLGTVNALSSSIDGKSPLY RVVWNDGVTEGGSSGSGLFTIASGGAYQLRGGLYGGYSFCSAQTDPDYYSRFSDVYSTISTYFGQ
Sequences:
>Translated_465_residues MNRKNAMYLALFSAISGTAAAAPPTEMDAAPVTTAPQAAKLGAATLQSASLRGGVLPTRVVQLAAPTSAEIGRVRERRIA QVKQGQPLQIGFSRAVAQPTVNLSRLDWQMAPDGSRVASLKVSSAQAASLRASLILRGAGATPGDPSKATLRFAGNDGRV FEQSGASFAASGNDIGWSPTVSGEDLLVELSLPAGLYPENFSLSIPQLSHLDISPTASPRDMMTIAIGESDSCQNDIVCR ANPTTGFTSAAKAVARMVFTTSQGSFLCTGTLLNNTNSPKRNLFWTAAHCISTQTVANTLQTYWFYDAASCNGSTVSSQA TTLTGGAFLRHANTTRDTALLELKTAPPSGAFYAAWNSAAIGSTGTSIVGIHHPSGDVKKYSLGTVNALSSSIDGKSPLY RVVWNDGVTEGGSSGSGLFTIASGGAYQLRGGLYGGYSFCSAQTDPDYYSRFSDVYSTISTYFGQ >Mature_465_residues MNRKNAMYLALFSAISGTAAAAPPTEMDAAPVTTAPQAAKLGAATLQSASLRGGVLPTRVVQLAAPTSAEIGRVRERRIA QVKQGQPLQIGFSRAVAQPTVNLSRLDWQMAPDGSRVASLKVSSAQAASLRASLILRGAGATPGDPSKATLRFAGNDGRV FEQSGASFAASGNDIGWSPTVSGEDLLVELSLPAGLYPENFSLSIPQLSHLDISPTASPRDMMTIAIGESDSCQNDIVCR ANPTTGFTSAAKAVARMVFTTSQGSFLCTGTLLNNTNSPKRNLFWTAAHCISTQTVANTLQTYWFYDAASCNGSTVSSQA TTLTGGAFLRHANTTRDTALLELKTAPPSGAFYAAWNSAAIGSTGTSIVGIHHPSGDVKKYSLGTVNALSSSIDGKSPLY RVVWNDGVTEGGSSGSGLFTIASGGAYQLRGGLYGGYSFCSAQTDPDYYSRFSDVYSTISTYFGQ
Specific function: Lysine-specific endoprotease. Involved in corneal virulence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009003 [H]
Pfam domain/function: NA
EC number: =3.4.21.50 [H]
Molecular weight: Translated: 48470; Mature: 48470
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKNAMYLALFSAISGTAAAAPPTEMDAAPVTTAPQAAKLGAATLQSASLRGGVLPTRV CCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH VQLAAPTSAEIGRVRERRIAQVKQGQPLQIGFSRAVAQPTVNLSRLDWQMAPDGSRVASL EEECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCHHHEEEEECCCCCEEEEE KVSSAQAASLRASLILRGAGATPGDPSKATLRFAGNDGRVFEQSGASFAASGNDIGWSPT EECCCHHHHEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEECCCCEEEECCCCCCCCCC VSGEDLLVELSLPAGLYPENFSLSIPQLSHLDISPTASPRDMMTIAIGESDSCQNDIVCR CCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE ANPTTGFTSAAKAVARMVFTTSQGSFLCTGTLLNNTNSPKRNLFWTAAHCISTQTVANTL ECCCCCHHHHHHHHHHHEEEECCCCEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHH QTYWFYDAASCNGSTVSSQATTLTGGAFLRHANTTRDTALLELKTAPPSGAFYAAWNSAA HHHEEEEECCCCCCEECCCCEEEECCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCC IGSTGTSIVGIHHPSGDVKKYSLGTVNALSSSIDGKSPLYRVVWNDGVTEGGSSGSGLFT CCCCCCEEEEEECCCCCCEEEECCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEE IASGGAYQLRGGLYGGYSFCSAQTDPDYYSRFSDVYSTISTYFGQ EECCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNRKNAMYLALFSAISGTAAAAPPTEMDAAPVTTAPQAAKLGAATLQSASLRGGVLPTRV CCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH VQLAAPTSAEIGRVRERRIAQVKQGQPLQIGFSRAVAQPTVNLSRLDWQMAPDGSRVASL EEECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCHHHEEEEECCCCCEEEEE KVSSAQAASLRASLILRGAGATPGDPSKATLRFAGNDGRVFEQSGASFAASGNDIGWSPT EECCCHHHHEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEECCCCEEEECCCCCCCCCC VSGEDLLVELSLPAGLYPENFSLSIPQLSHLDISPTASPRDMMTIAIGESDSCQNDIVCR CCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE ANPTTGFTSAAKAVARMVFTTSQGSFLCTGTLLNNTNSPKRNLFWTAAHCISTQTVANTL ECCCCCHHHHHHHHHHHEEEECCCCEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHH QTYWFYDAASCNGSTVSSQATTLTGGAFLRHANTTRDTALLELKTAPPSGAFYAAWNSAA HHHEEEEECCCCCCEECCCCEEEECCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCC IGSTGTSIVGIHHPSGDVKKYSLGTVNALSSSIDGKSPLYRVVWNDGVTEGGSSGSGLFT CCCCCCEEEEEECCCCCCEEEECCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEE IASGGAYQLRGGLYGGYSFCSAQTDPDYYSRFSDVYSTISTYFGQ EECCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12419815; 10984043 [H]