| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is qxtB [H]
Identifier: 21243709
GI number: 21243709
Start: 3484240
End: 3485256
Strand: Reverse
Name: qxtB [H]
Synonym: XAC2982
Alternate gene names: 21243709
Gene position: 3485256-3484240 (Counterclockwise)
Preceding gene: 77748686
Following gene: 21243693
Centisome position: 67.34
GC content: 63.42
Gene sequence:
>1017_bases ATGGAGATGACGAGCGTCTTGCCGGTGGCGTGGTTTGCGGTGATCGGCTTCGGGGTGCTGATGTACGTCGTGCTGGACGG GTTCGTGCTCGGCATCGGCATCCTGGCGCCGTTCCGCAAGGACGAAGCGCAGCTGGATCTGATGATGAACACCGCCGCGC CGATCTGGGACGGCAACGAAACCTGGCTGGTGCTCGGCGGGGCAGGGCTGCTGGCCGCATTTCCCAAGGCGTATGCGGTG ATCTTGTCGGCGCTGTATCTGCCGGTGCTGTTGATGGTGATGGCCTTGGTGTTCCGCGGCGTGGCCTTCGAATTCCGTTT CAAGGCGCATCGCTCGCGGCGCTTGTGGAGCAATGCGTTTGCCGCCGGTTCGATCCTGGCCACTTTCGCGCAGGGCGTGA TCCTGGGCGCCCTGGTGCAGGGTCTGCCGATCGAGAACGACCGTTATGTCGGCGGCATCTGGGGCTGGTTCAGCCCGTTC GCGATGTTGACGGGCGCCGCCTTGGTGTTCGGCTATGCGCTGCTCGGCAGTACCTGGCTGATTCTCAAGACAGAAGGCCA TGTGCAGCAGTTGGCGCGGCAGTTGAGTCGACCGTTGACCATCAGTGTGTTGATCTTCATCGGCCTGGTCAGCGCCTGGT TGCCTTCGCTGCAGTCGCATGTGATGGAGCGCTGGTTCAGTGGCACGCACTATCTGTGGCTGATGCCGATGCCGCTGCTG GTGGCCATCGTGGGGGTTGCGCTGTGGCGTGCGAGCGAGGCCGCACGCTCGGATGCGCTGCCATTCCTGCTGGCGATGGG CCTGTTCGTGCTGGGCTTTTTGGGCCTGGTGCTGGGCATGTGGCCGTATCTGGTGCCGCCGGTCTACACCCTCTGGCAGG CTGCCGCACCGCCGTCTTCGCAGCTGTTCGCGATGGTGGGGCTGGTCATGTTGCTGCCCCTGATCCTGGGCTACACGGTA TGGTCGTACCGCGTATTCCGCGGCAAGATCACCGCTGACAACGGCTATCATCACTAA
Upstream 100 bases:
>100_bases GGCCCACCCCACATGCCGACGCGCCGCATCTGGACCATGGCGAACACACGCCCGCACGGCCGCTGTCGGCAGCCGACGAA TCGATCGACGGAGCCGCATG
Downstream 100 bases:
>100_bases GAGCTGCTAACAAAACGACTGCGCAGCCGCCAGGCGGGCGCGGCTGGTGCTCGGAATCGGCATGTACCACGCGAACACTT CGGTTCCTGTGCGCCGTCCG
Product: quinol oxidase subunit II
Products: NA
Alternate protein names: Cytochrome bd-I oxidase subunit II; Cytochrome d ubiquinol oxidase subunit II [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MEMTSVLPVAWFAVIGFGVLMYVVLDGFVLGIGILAPFRKDEAQLDLMMNTAAPIWDGNETWLVLGGAGLLAAFPKAYAV ILSALYLPVLLMVMALVFRGVAFEFRFKAHRSRRLWSNAFAAGSILATFAQGVILGALVQGLPIENDRYVGGIWGWFSPF AMLTGAALVFGYALLGSTWLILKTEGHVQQLARQLSRPLTISVLIFIGLVSAWLPSLQSHVMERWFSGTHYLWLMPMPLL VAIVGVALWRASEAARSDALPFLLAMGLFVLGFLGLVLGMWPYLVPPVYTLWQAAAPPSSQLFAMVGLVMLLPLILGYTV WSYRVFRGKITADNGYHH
Sequences:
>Translated_338_residues MEMTSVLPVAWFAVIGFGVLMYVVLDGFVLGIGILAPFRKDEAQLDLMMNTAAPIWDGNETWLVLGGAGLLAAFPKAYAV ILSALYLPVLLMVMALVFRGVAFEFRFKAHRSRRLWSNAFAAGSILATFAQGVILGALVQGLPIENDRYVGGIWGWFSPF AMLTGAALVFGYALLGSTWLILKTEGHVQQLARQLSRPLTISVLIFIGLVSAWLPSLQSHVMERWFSGTHYLWLMPMPLL VAIVGVALWRASEAARSDALPFLLAMGLFVLGFLGLVLGMWPYLVPPVYTLWQAAAPPSSQLFAMVGLVMLLPLILGYTV WSYRVFRGKITADNGYHH >Mature_338_residues MEMTSVLPVAWFAVIGFGVLMYVVLDGFVLGIGILAPFRKDEAQLDLMMNTAAPIWDGNETWLVLGGAGLLAAFPKAYAV ILSALYLPVLLMVMALVFRGVAFEFRFKAHRSRRLWSNAFAAGSILATFAQGVILGALVQGLPIENDRYVGGIWGWFSPF AMLTGAALVFGYALLGSTWLILKTEGHVQQLARQLSRPLTISVLIFIGLVSAWLPSLQSHVMERWFSGTHYLWLMPMPLL VAIVGVALWRASEAARSDALPFLLAMGLFVLGFLGLVLGMWPYLVPPVYTLWQAAAPPSSQLFAMVGLVMLLPLILGYTV WSYRVFRGKITADNGYHH
Specific function: Cytochrome d terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at low aeration [H]
COG id: COG1294
COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli AppB [H]
Homologues:
Organism=Escherichia coli, GI1786954, Length=379, Percent_Identity=28.2321899736148, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1787213, Length=363, Percent_Identity=26.7217630853994, Blast_Score=115, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003317 [H]
Pfam domain/function: PF02322 Cyto_ox_2 [H]
EC number: 1.10.3.-
Molecular weight: Translated: 37138; Mature: 37138
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMTSVLPVAWFAVIGFGVLMYVVLDGFVLGIGILAPFRKDEAQLDLMMNTAAPIWDGNE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCC TWLVLGGAGLLAAFPKAYAVILSALYLPVLLMVMALVFRGVAFEFRFKAHRSRRLWSNAF EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGSILATFAQGVILGALVQGLPIENDRYVGGIWGWFSPFAMLTGAALVFGYALLGSTWL HHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEE ILKTEGHVQQLARQLSRPLTISVLIFIGLVSAWLPSLQSHVMERWFSGTHYLWLMPMPLL EEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH VAIVGVALWRASEAARSDALPFLLAMGLFVLGFLGLVLGMWPYLVPPVYTLWQAAAPPSS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH QLFAMVGLVMLLPLILGYTVWSYRVFRGKITADNGYHH HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCC >Mature Secondary Structure MEMTSVLPVAWFAVIGFGVLMYVVLDGFVLGIGILAPFRKDEAQLDLMMNTAAPIWDGNE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCC TWLVLGGAGLLAAFPKAYAVILSALYLPVLLMVMALVFRGVAFEFRFKAHRSRRLWSNAF EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGSILATFAQGVILGALVQGLPIENDRYVGGIWGWFSPFAMLTGAALVFGYALLGSTWL HHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEE ILKTEGHVQQLARQLSRPLTISVLIFIGLVSAWLPSLQSHVMERWFSGTHYLWLMPMPLL EEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH VAIVGVALWRASEAARSDALPFLLAMGLFVLGFLGLVLGMWPYLVPPVYTLWQAAAPPSS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH QLFAMVGLVMLLPLILGYTVWSYRVFRGKITADNGYHH HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]