| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yecE [C]
Identifier: 21243647
GI number: 21243647
Start: 3427108
End: 3428016
Strand: Direct
Name: yecE [C]
Synonym: XAC2920
Alternate gene names: 21243647
Gene position: 3427108-3428016 (Clockwise)
Preceding gene: 21243646
Following gene: 77748681
Centisome position: 66.22
GC content: 64.14
Gene sequence:
>909_bases ATGCTCGGGGTTATGGCTATTTGCATCGGCATTTCCGGCTGGCGTTACGCACGCTGGCGCGGCACGTTTTACCCGGCCGG CCTGGCCCAACGGCGCGAGCTCGAATACGCCGCGGGCTGCTTTCCCAGCGTGGAAATCAATGGCTCCTTCTATTCGCTGC AGCGCCCGGAAAGCTTCCAGCGCTGGCATGACGAAACGCCTGAGGATTTCGTCTTTTCGGTCAAGGGTCCTCGCTTCATC ACCCATATGAAGCGCTTGCGCGATTGCGAGCAGGCGCTGGCCAACTTCTTCGCTTCCGGGGTGTTGCGGCTGGGCGCCAA ACTGGGTCCGATCCTGTGGCAGCTACCGCCGACCCTACAGTTCGATGCCGAGCTGCTGGACGCATTTCTCGGCAGCCTGC CGCGCGATAGCGAGGCCGCGTTGGCGAGGGCGCGCAAACGCGACACCGCGCTGATGCAGGGCCGCAGCGCGCTGGCGATC GATCGCCGGCGACCGATCCGTCACGCATTGGAAGTGCGTCACGACAGCTTCTGCGATCCGGCCTGCATGCGGCTGCTGCG GCGTCACAATGTCGCGGTGGTGGTCGCCGACACCGCAGGGAAATTCCCGTATCTGGAGGACGTCAGCGCAGATTTCGTCT ATGTGCGTCTGCATGGCGATGCGCAGTTGTACGCCAGCGGCTACAGCGACACCGCACTGGATCGCTGGGCAGCACGCATC GCCGCGTGGGCCGGCGGAGCCGAACCGGACGATGCAGCCCGCGTCGGCGCACGCGCCCGCAAACGCGCAATGCGCGATGT GTACTGTTATTTCGACAACGACATGAAGGTGCATGCGCCGTTCGATGCGCGCGGCTTGATGCAACGGCTGCAGTTGCCTA CCAACTGCCCGGCACGCGAAAACACCTAG
Upstream 100 bases:
>100_bases CAGATCCGGGCACTGGCGCCGCCCTGGTTGCAGGCGCAGAAGCCGGCAAAGGCGCGCACGGTCCAGCGCGGCTAGACACC TCTTGCACGCCGTACGCGAA
Downstream 100 bases:
>100_bases AACTGCTGACAAACGACGGTGCCAACGCCAGGCGCGCCTTGCGGCGCACGGAAAGCGGCATGCATCGCTGGCACGCTGCG GTTCTGGGCGCGCCAGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MLGVMAICIGISGWRYARWRGTFYPAGLAQRRELEYAAGCFPSVEINGSFYSLQRPESFQRWHDETPEDFVFSVKGPRFI THMKRLRDCEQALANFFASGVLRLGAKLGPILWQLPPTLQFDAELLDAFLGSLPRDSEAALARARKRDTALMQGRSALAI DRRRPIRHALEVRHDSFCDPACMRLLRRHNVAVVVADTAGKFPYLEDVSADFVYVRLHGDAQLYASGYSDTALDRWAARI AAWAGGAEPDDAARVGARARKRAMRDVYCYFDNDMKVHAPFDARGLMQRLQLPTNCPARENT
Sequences:
>Translated_302_residues MLGVMAICIGISGWRYARWRGTFYPAGLAQRRELEYAAGCFPSVEINGSFYSLQRPESFQRWHDETPEDFVFSVKGPRFI THMKRLRDCEQALANFFASGVLRLGAKLGPILWQLPPTLQFDAELLDAFLGSLPRDSEAALARARKRDTALMQGRSALAI DRRRPIRHALEVRHDSFCDPACMRLLRRHNVAVVVADTAGKFPYLEDVSADFVYVRLHGDAQLYASGYSDTALDRWAARI AAWAGGAEPDDAARVGARARKRAMRDVYCYFDNDMKVHAPFDARGLMQRLQLPTNCPARENT >Mature_302_residues MLGVMAICIGISGWRYARWRGTFYPAGLAQRRELEYAAGCFPSVEINGSFYSLQRPESFQRWHDETPEDFVFSVKGPRFI THMKRLRDCEQALANFFASGVLRLGAKLGPILWQLPPTLQFDAELLDAFLGSLPRDSEAALARARKRDTALMQGRSALAI DRRRPIRHALEVRHDSFCDPACMRLLRRHNVAVVVADTAGKFPYLEDVSADFVYVRLHGDAQLYASGYSDTALDRWAARI AAWAGGAEPDDAARVGARARKRAMRDVYCYFDNDMKVHAPFDARGLMQRLQLPTNCPARENT
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34089; Mature: 34089
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGVMAICIGISGWRYARWRGTFYPAGLAQRRELEYAAGCFPSVEINGSFYSLQRPESFQ CHHHHEEEHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCEEECCCCHHHH RWHDETPEDFVFSVKGPRFITHMKRLRDCEQALANFFASGVLRLGAKLGPILWQLPPTLQ HHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCC FDAELLDAFLGSLPRDSEAALARARKRDTALMQGRSALAIDRRRPIRHALEVRHDSFCDP CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCCH ACMRLLRRHNVAVVVADTAGKFPYLEDVSADFVYVRLHGDAQLYASGYSDTALDRWAARI HHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHH AAWAGGAEPDDAARVGARARKRAMRDVYCYFDNDMKVHAPFDARGLMQRLQLPTNCPARE HHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCHHHHHHHHCCCCCCCCCC NT CC >Mature Secondary Structure MLGVMAICIGISGWRYARWRGTFYPAGLAQRRELEYAAGCFPSVEINGSFYSLQRPESFQ CHHHHEEEHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCEEECCCCHHHH RWHDETPEDFVFSVKGPRFITHMKRLRDCEQALANFFASGVLRLGAKLGPILWQLPPTLQ HHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCC FDAELLDAFLGSLPRDSEAALARARKRDTALMQGRSALAIDRRRPIRHALEVRHDSFCDP CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCCH ACMRLLRRHNVAVVVADTAGKFPYLEDVSADFVYVRLHGDAQLYASGYSDTALDRWAARI HHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHH AAWAGGAEPDDAARVGARARKRAMRDVYCYFDNDMKVHAPFDARGLMQRLQLPTNCPARE HHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCHHHHHHHHCCCCCCCCCC NT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA