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The map label for this gene is algH [C]

Identifier: 21243645

GI number: 21243645

Start: 3425655

End: 3426221

Strand: Reverse

Name: algH [C]

Synonym: XAC2918

Alternate gene names: 21243645

Gene position: 3426221-3425655 (Counterclockwise)

Preceding gene: 21243648

Following gene: 21243644

Centisome position: 66.2

GC content: 66.31

Gene sequence:

>567_bases
ATGTCTGTTTTGCCCACGCCTCTGGCCAACCAACTGCTGATTGCGCTTCCGGCGCTGTCCGACCCCACCTTTTCGCGCAG
CGTCGCGCTGATCTGCCAGCACGATGAGAACGGCGCCATGGGCGTGCTGGTCAACCGGCCCTCCGAATACACGCTGGGCG
AGGTCCTGTCGCAGATGGGCATCGACACCGTCGACGAGCACCTGCGCGAGCAGATCGTGCTCAGCGGCGGGCCGGTGCAC
CCGGAGCGCGGTTTCGTCATCCACGACGATGCGCGCGACTGGGATTCCAGCCTGGAAGTGGGGCAGGGTGTCTACCTGAC
CACCTCGCGCGACATTCTCGAAGCGATGGCGGCCGGCGAAGGGCCGCGCAATGCGCTGGTGGCGCTGGGCTGTGCCGGCT
GGGGCGCGGGGCAGTTGGAATTCGAACTGGGCGAGAACAGCTGGCTGACCGCGCCGTCGGATGCCAATGTGCTGTTCGCC
ACCGCGCTGGAAGATCGCTGGCAGACCGCTGCCGGGCGTATTGGCGTGGATCTGTTCCGGCTGACGGATTATTCCGGGCA
TGCCTGA

Upstream 100 bases:

>100_bases
GAAGGCAGCCGCATCGGCGGCATCGCGCAGTCCCGGCGCCGGCAAGGCCCAGTATGGCAGCGGCTCTGCGCGCGGCGAAG
CGAACGGCTAGAATGCGGCC

Downstream 100 bases:

>100_bases
GGCGGGCGCGATCCGCCCCGATGGCACGGTGCTGGGCTTCGATGTGGGGTCGCGCCGGATCGGTGTGGCGGTCGGAAGCG
CGCTTGGCGCCGGCGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMGIDTVDEHLREQIVLSGGPVH
PERGFVIHDDARDWDSSLEVGQGVYLTTSRDILEAMAAGEGPRNALVALGCAGWGAGQLEFELGENSWLTAPSDANVLFA
TALEDRWQTAAGRIGVDLFRLTDYSGHA

Sequences:

>Translated_188_residues
MSVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMGIDTVDEHLREQIVLSGGPVH
PERGFVIHDDARDWDSSLEVGQGVYLTTSRDILEAMAAGEGPRNALVALGCAGWGAGQLEFELGENSWLTAPSDANVLFA
TALEDRWQTAAGRIGVDLFRLTDYSGHA
>Mature_187_residues
SVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMGIDTVDEHLREQIVLSGGPVHP
ERGFVIHDDARDWDSSLEVGQGVYLTTSRDILEAMAAGEGPRNALVALGCAGWGAGQLEFELGENSWLTAPSDANVLFAT
ALEDRWQTAAGRIGVDLFRLTDYSGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family [H]

Homologues:

Organism=Escherichia coli, GI87082187, Length=185, Percent_Identity=45.4054054054054, Blast_Score=171, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003774 [H]

Pfam domain/function: PF02622 DUF179 [H]

EC number: NA

Molecular weight: Translated: 20142; Mature: 20011

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMG
CCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCC
IDTVDEHLREQIVLSGGPVHPERGFVIHDDARDWDSSLEVGQGVYLTTSRDILEAMAAGE
CCHHHHHHHHHEEECCCCCCCCCCEEEECCCCCCCCHHHHCCCEEEEECHHHHHHHHCCC
GPRNALVALGCAGWGAGQLEFELGENSWLTAPSDANVLFATALEDRWQTAAGRIGVDLFR
CCCCEEEEEEECCCCCCEEEEEECCCCEEECCCCCCEEEEEEHHHHHHHHCCCCCEEEEE
LTDYSGHA
EECCCCCC
>Mature Secondary Structure 
SVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMG
CCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCC
IDTVDEHLREQIVLSGGPVHPERGFVIHDDARDWDSSLEVGQGVYLTTSRDILEAMAAGE
CCHHHHHHHHHEEECCCCCCCCCCEEEECCCCCCCCHHHHCCCEEEEECHHHHHHHHCCC
GPRNALVALGCAGWGAGQLEFELGENSWLTAPSDANVLFATALEDRWQTAAGRIGVDLFR
CCCCEEEEEEECCCCCCEEEEEECCCCEEECCCCCCEEEEEEHHHHHHHHCCCCCEEEEE
LTDYSGHA
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA