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The map label for this gene is ysgA [C]

Identifier: 21243634

GI number: 21243634

Start: 3413447

End: 3414214

Strand: Reverse

Name: ysgA [C]

Synonym: XAC2907

Alternate gene names: 21243634

Gene position: 3414214-3413447 (Counterclockwise)

Preceding gene: 21243635

Following gene: 21243632

Centisome position: 65.97

GC content: 67.19

Gene sequence:

>768_bases
TTGATCGGTGTCCTGGCCTCGCTGGCCTTCCCTGCAGCGGCCGCGATGCAGGCCAAGCCGCTGGAATGGAAGATCGGCAA
GGACACCTACAGCGGCGTGCTGGTGTATGACGATGCCGGCGATGCCAAGCGCCCGGGCCTGGTGATGGTGCCCAACTGGC
GCGGTGTCAACGACTCGGCGGTGAGCAAGGCCAAGCAACTGGCCGGCGACGATTACGTGGTGCTGGTGGCCGACGTGTAT
GGCAAGGGCAAGCGCCCCGCCAACGACAGCGAGGCTGGACAGTTCGCCGGCGCCCTGAAGAAGGATCCGCCGGAGCTGCG
CGCACGCGCGCTCAAGGCGGTAGAGGTACTCAAGGCGCAGGCCGGCAAGGCGCCGCTGGACGCAGCGCGCATCGGTGCTG
TGGGCTTCTGCTTCGGCGGTACGACGGTGCTGGAGCTGGTGCGCTCAGGCGCGCAGCTGGCCGGTGTGGTCAGCCTGCAT
GGCGGCATCGCGACTCCCAGCCCGGCTGCGGCCGGCTCTGCCAAGACGCCCCTGCTGGTGCTCAACGGTGCCGACGACAA
GAGCGTGAGCAAGGCGGATATCGCCGCGTTCGAAACCGAAATGAATGCAGCCGGCGCGGATTGGCAATTCGTCAATTTCA
GCGGCGCGGTGCATTGCTTTGCCGAGGCCGACGCCAACAGCCCGCCGGGCTGCCTGTACAACCCGCGGGCGGCCAAGCGT
GCGTACCGCATGCTGGGCGACTTCTTCGAAGAGCGGTTTGGTCAGTAG

Upstream 100 bases:

>100_bases
GGCGACGATGACCTCTCCTGCACGGCGCCAGCGCCTACACTCGCCGCACCATCCTGGGAGCAAGCACATGCACAAGCAAT
GGACATGGCGTGGCGTTGGG

Downstream 100 bases:

>100_bases
CCGGGATTGGGGATTTGGGATTCGCAAGAGCGCGGGTCCCGTGCTTCAACGCATCACCCCCCGGAGTTTGTGCTCCGGGG
GAGGGCGCTGACCAATCATT

Product: hypothetical protein

Products: oxohex-2-enedioate [C]

Alternate protein names: Dienelactone Hydrolase Family Protein; Carboxymethylenebutenolidase; Dienelactone Hydrolase Family; Hydrolase; Twin-Arginine Translocation Pathway Signal; Dienelactone Hydrolases; Dienelactone Hydrolase Protein; Dienelactone Hydrolase-Related; Transposase Remnant

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIGVLASLAFPAAAAMQAKPLEWKIGKDTYSGVLVYDDAGDAKRPGLVMVPNWRGVNDSAVSKAKQLAGDDYVVLVADVY
GKGKRPANDSEAGQFAGALKKDPPELRARALKAVEVLKAQAGKAPLDAARIGAVGFCFGGTTVLELVRSGAQLAGVVSLH
GGIATPSPAAAGSAKTPLLVLNGADDKSVSKADIAAFETEMNAAGADWQFVNFSGAVHCFAEADANSPPGCLYNPRAAKR
AYRMLGDFFEERFGQ

Sequences:

>Translated_255_residues
MIGVLASLAFPAAAAMQAKPLEWKIGKDTYSGVLVYDDAGDAKRPGLVMVPNWRGVNDSAVSKAKQLAGDDYVVLVADVY
GKGKRPANDSEAGQFAGALKKDPPELRARALKAVEVLKAQAGKAPLDAARIGAVGFCFGGTTVLELVRSGAQLAGVVSLH
GGIATPSPAAAGSAKTPLLVLNGADDKSVSKADIAAFETEMNAAGADWQFVNFSGAVHCFAEADANSPPGCLYNPRAAKR
AYRMLGDFFEERFGQ
>Mature_255_residues
MIGVLASLAFPAAAAMQAKPLEWKIGKDTYSGVLVYDDAGDAKRPGLVMVPNWRGVNDSAVSKAKQLAGDDYVVLVADVY
GKGKRPANDSEAGQFAGALKKDPPELRARALKAVEVLKAQAGKAPLDAARIGAVGFCFGGTTVLELVRSGAQLAGVVSLH
GGIATPSPAAAGSAKTPLLVLNGADDKSVSKADIAAFETEMNAAGADWQFVNFSGAVHCFAEADANSPPGCLYNPRAAKR
AYRMLGDFFEERFGQ

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17532655, Length=231, Percent_Identity=36.7965367965368, Blast_Score=134, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI17532653, Length=235, Percent_Identity=32.3404255319149, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI193204305, Length=215, Percent_Identity=31.6279069767442, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17536419, Length=213, Percent_Identity=29.1079812206573, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17536415, Length=255, Percent_Identity=25.0980392156863, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17534829, Length=154, Percent_Identity=30.5194805194805, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.1.45 [C]

Molecular weight: Translated: 26471; Mature: 26471

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGVLASLAFPAAAAMQAKPLEWKIGKDTYSGVLVYDDAGDAKRPGLVMVPNWRGVNDSA
CCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCEEECCCCCCCCHHH
VSKAKQLAGDDYVVLVADVYGKGKRPANDSEAGQFAGALKKDPPELRARALKAVEVLKAQ
HHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AGKAPLDAARIGAVGFCFGGTTVLELVRSGAQLAGVVSLHGGIATPSPAAAGSAKTPLLV
CCCCCCCHHHHCEEEEECCCHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCCCCCCEEE
LNGADDKSVSKADIAAFETEMNAAGADWQFVNFSGAVHCFAEADANSPPGCLYNPRAAKR
EECCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHH
AYRMLGDFFEERFGQ
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGVLASLAFPAAAAMQAKPLEWKIGKDTYSGVLVYDDAGDAKRPGLVMVPNWRGVNDSA
CCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCEEECCCCCCCCHHH
VSKAKQLAGDDYVVLVADVYGKGKRPANDSEAGQFAGALKKDPPELRARALKAVEVLKAQ
HHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AGKAPLDAARIGAVGFCFGGTTVLELVRSGAQLAGVVSLHGGIATPSPAAAGSAKTPLLV
CCCCCCCHHHHCEEEEECCCHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCCCCCCEEE
LNGADDKSVSKADIAAFETEMNAAGADWQFVNFSGAVHCFAEADANSPPGCLYNPRAAKR
EECCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHH
AYRMLGDFFEERFGQ
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 4-carboxymethylenebut-2-en-4-olide; H2O [C]

Specific reaction: 4-carboxymethylenebut-2-en-4-olide + H2O = 4 oxohex-2-enedioate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA