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The map label for this gene is yjiX [H]

Identifier: 21243609

GI number: 21243609

Start: 3382073

End: 3382297

Strand: Direct

Name: yjiX [H]

Synonym: XAC2882

Alternate gene names: 21243609

Gene position: 3382073-3382297 (Clockwise)

Preceding gene: 21243608

Following gene: 21243611

Centisome position: 65.35

GC content: 62.67

Gene sequence:

>225_bases
ATGGGCACGCAACTCGTCCTGGCCAGTCACTATCAGGCGCATCGCCGCATCTGGCGGCGCCTGATCCAGACCGCGCGGCT
GTGCTGCGGCATCCCCGACTACGACAACTACGTGCGCCACATGCTGGAAAAACATCCCGACAAACCGGTGATGGACTACC
CCGCCTTCTTCCGCGAGCGCCAGGATGCGCGCTATGGCGGCAAGAGTGGGTTTCGGTGTTGTTGA

Upstream 100 bases:

>100_bases
ATTCGATCAAGACGATCGTGGCGGCACGCCGCAACCCGCAGCGCACTGACCGCGAAACCCCGTACGTGGCGTTGCAGCCG
CACCAGATGGCAGACCTGTA

Downstream 100 bases:

>100_bases
ATGGCTGATTGATTGATGGGTGATCGATTGATCAAGAGGTAGAAACGCAACAGGGCGCGATGCGAATCGCGCCCTGTTGC
GTTGATGTGGCCGAAGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MGTQLVLASHYQAHRRIWRRLIQTARLCCGIPDYDNYVRHMLEKHPDKPVMDYPAFFRERQDARYGGKSGFRCC

Sequences:

>Translated_74_residues
MGTQLVLASHYQAHRRIWRRLIQTARLCCGIPDYDNYVRHMLEKHPDKPVMDYPAFFRERQDARYGGKSGFRCC
>Mature_73_residues
GTQLVLASHYQAHRRIWRRLIQTARLCCGIPDYDNYVRHMLEKHPDKPVMDYPAFFRERQDARYGGKSGFRCC

Specific function: Unknown

COG id: COG2879

COG function: function code S; Uncharacterized small protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybdD [H]

Homologues:

Organism=Escherichia coli, GI1790813, Length=58, Percent_Identity=63.7931034482759, Blast_Score=80, Evalue=3e-17,
Organism=Escherichia coli, GI87081761, Length=59, Percent_Identity=61.0169491525424, Blast_Score=79, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007423 [H]

Pfam domain/function: PF04328 DUF466 [H]

EC number: NA

Molecular weight: Translated: 8831; Mature: 8700

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTQLVLASHYQAHRRIWRRLIQTARLCCGIPDYDNYVRHMLEKHPDKPVMDYPAFFRER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
QDARYGGKSGFRCC
HHHCCCCCCCCCCC
>Mature Secondary Structure 
GTQLVLASHYQAHRRIWRRLIQTARLCCGIPDYDNYVRHMLEKHPDKPVMDYPAFFRER
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
QDARYGGKSGFRCC
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]