| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is cstA [H]
Identifier: 21243608
GI number: 21243608
Start: 3380001
End: 3382073
Strand: Direct
Name: cstA [H]
Synonym: XAC2881
Alternate gene names: 21243608
Gene position: 3380001-3382073 (Clockwise)
Preceding gene: 77748678
Following gene: 21243609
Centisome position: 65.31
GC content: 64.79
Gene sequence:
>2073_bases ATGAAAGGGTTCTCGAAGCTGGCCTGGGGCGCGTTGGCGCTGCTGGCCGCGTTCTGCCTGGGTACCGTTGCGCTGCGGCG TGGCGAGCACATCAACGCGTTGTGGATCGTGGTGGCGGCGGTATCGATCTACCTGATCGCCTACCGGTTCTACAGCCTGT TCATCGCCGACAAGGTGATGCAGCTGGACATCACCCGCGCCACCCCGGCAGTCGCCAACAACGACGGCCTGGATTACGTG CCCACCAACAAGCACGTGCTGTTCGGCCACCACTTTGCTGCCATCGCCGGCGCCGGCCCCCTGGTCGGCCCGGTACTCGC CGCGCAGATGGGCTACCTGCCCGGCCTGCTGTGGCTGGTGGTCGGCGTGGTGTTCGCCGGTGCGGTGCAGGACTTCGTGG TGCTGTTCCTGTCCAGCCGTCGCAACGGCCGCTCGCTAGGCGACCTGGTGCGCGAGGAGATGGGCCAGGTGCCCGGCACC ATCGCCCTGTTCGGCGCATTCCTGATCATGATCATCATCCTTGCCGTGCTGGCGATGGTGGTGGTCAAGGCGCTGGCGGA AAGCCCGTGGGGCATGTTCACCGTCATCGCCACAATGCCCATCGCGCTCATGATGGGCGTGTACATGCGCTACATCCGCG TCGGCAAGATCGGCGAGATCTCGGTGGTGGGGTTGATCCTGCTGCTGGGCGCGATCTGGCTGGGCGGCAAGGTGGCGGCG GACCCGACCTGGGGCCCGGCCTTCACCTTCACTGCCAAGCAGATCACCTGGATGCTGATCGGCTACGGCTTCGTCGCATC GGTGCTGCCGGTGTGGCTGCTGTTGGCACCGCGCGACTACCTGTCCACCTTCCTCAAGATCGGTACCATCCTGGCGCTGG CGATCGGCATCCTGGTGGTCATGCCGGACCTGAAAATGCCGGCGCTCACGCAATTCGCCTCCACCGGCGATGGCCCGGTC TGGAAGGGCGGCATCTTCCCGTTCCTGTTCATCACCATTGCCTGCGGCGCGGTCTCCGGCTTCCATGCGTTGATCGCTTC CGGCACGACGCCCAAGCTGCTCGCCAATGAAGGCCACATGCGCTACATCGGCTATGGCGGCATGCTGATGGAATCGTTCG TGGCGATCATGGCGCTGGTGGCCGCGTCGATCATCGAGCCGGGCATCTACTTCGCCATGAACAGCCCTGCCTCGCTGGTC GGCAGCGACACTGTCGCAGTCGCTGCCAAGATCAGCGAGTGGGGCTTTTCGATCACACCGCAGGTGCTCGAGGCCACGGC ACGCGATATCGGCGAGCACAGCATCCTGGCGCGCGCCGGCGGGGCACCGACGCTGGCGGTGGGCATCGCGCAGATCCTGC ACCAGTTGCTGCCGGGCGAAGACACCATGGCGTTCTGGTATCACTTCGCCATCCTGTTCGAAGCACTGTTCATCCTGACC GCGGTGGACGCCGGCACGCGCGCCGGCCGCTTCATGCTGCAGGACCTGCTGGGCAACTTCATCCCGGCGTTGAAGAAGAC CGAGTCGTGGACCGCCAATATCATCGCCACCGCCGGCTGCGTGGCGCTGTGGGGCTATCTGCTCTACACCGGCGTGATCG ATCCGTTCGGCGGCATCCAGACCTTGTGGCCGTTGTTCGGCATCTCCAACCAGATGCTGGCCGGGATCGCGTTGATGCTG GGCGCGGTGGTGCTGTTCAAGATGAAGCGCGACCGCTACGCGTGGGTCACCATCGTGCCGGCGCTGTGGCTGTTGCTGTG CACCACCTATGCGGGGCTGATCAAGATCTTCGACAGCAACCCGGCGCAGGGCTTCCTGGCACAGGCCCACAAGTTCCAGG CGGCCATCGCCAGCAACACCATCACTGCGCCGGCCAAGACGGTGCCGCAGATGCAGCAGATCGTCACCAATGCCTACGTC AACACCGGGCTGACCGTACTGTTCCTGTTCGTGGTCGGCTCGATCCTGATCTATTCGATCAAGACGATCGTGGCGGCACG CCGCAACCCGCAGCGCACTGACCGCGAAACCCCGTACGTGGCGTTGCAGCCGCACCAGATGGCAGACCTGTAA
Upstream 100 bases:
>100_bases AGCACCCTACGACCAAAGTTTTACCCCCTTGCATCCGGCTGGCATTGACCGCGGCCGGGCGTGGGTGGACCCTTGAACGA ATCGTTCCTGAGGGGCATGC
Downstream 100 bases:
>100_bases TGGGCACGCAACTCGTCCTGGCCAGTCACTATCAGGCGCATCGCCGCATCTGGCGGCGCCTGATCCAGACCGCGCGGCTG TGCTGCGGCATCCCCGACTA
Product: carbon starvation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MKGFSKLAWGALALLAAFCLGTVALRRGEHINALWIVVAAVSIYLIAYRFYSLFIADKVMQLDITRATPAVANNDGLDYV PTNKHVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGLLWLVVGVVFAGAVQDFVVLFLSSRRNGRSLGDLVREEMGQVPGT IALFGAFLIMIIILAVLAMVVVKALAESPWGMFTVIATMPIALMMGVYMRYIRVGKIGEISVVGLILLLGAIWLGGKVAA DPTWGPAFTFTAKQITWMLIGYGFVASVLPVWLLLAPRDYLSTFLKIGTILALAIGILVVMPDLKMPALTQFASTGDGPV WKGGIFPFLFITIACGAVSGFHALIASGTTPKLLANEGHMRYIGYGGMLMESFVAIMALVAASIIEPGIYFAMNSPASLV GSDTVAVAAKISEWGFSITPQVLEATARDIGEHSILARAGGAPTLAVGIAQILHQLLPGEDTMAFWYHFAILFEALFILT AVDAGTRAGRFMLQDLLGNFIPALKKTESWTANIIATAGCVALWGYLLYTGVIDPFGGIQTLWPLFGISNQMLAGIALML GAVVLFKMKRDRYAWVTIVPALWLLLCTTYAGLIKIFDSNPAQGFLAQAHKFQAAIASNTITAPAKTVPQMQQIVTNAYV NTGLTVLFLFVVGSILIYSIKTIVAARRNPQRTDRETPYVALQPHQMADL
Sequences:
>Translated_690_residues MKGFSKLAWGALALLAAFCLGTVALRRGEHINALWIVVAAVSIYLIAYRFYSLFIADKVMQLDITRATPAVANNDGLDYV PTNKHVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGLLWLVVGVVFAGAVQDFVVLFLSSRRNGRSLGDLVREEMGQVPGT IALFGAFLIMIIILAVLAMVVVKALAESPWGMFTVIATMPIALMMGVYMRYIRVGKIGEISVVGLILLLGAIWLGGKVAA DPTWGPAFTFTAKQITWMLIGYGFVASVLPVWLLLAPRDYLSTFLKIGTILALAIGILVVMPDLKMPALTQFASTGDGPV WKGGIFPFLFITIACGAVSGFHALIASGTTPKLLANEGHMRYIGYGGMLMESFVAIMALVAASIIEPGIYFAMNSPASLV GSDTVAVAAKISEWGFSITPQVLEATARDIGEHSILARAGGAPTLAVGIAQILHQLLPGEDTMAFWYHFAILFEALFILT AVDAGTRAGRFMLQDLLGNFIPALKKTESWTANIIATAGCVALWGYLLYTGVIDPFGGIQTLWPLFGISNQMLAGIALML GAVVLFKMKRDRYAWVTIVPALWLLLCTTYAGLIKIFDSNPAQGFLAQAHKFQAAIASNTITAPAKTVPQMQQIVTNAYV NTGLTVLFLFVVGSILIYSIKTIVAARRNPQRTDRETPYVALQPHQMADL >Mature_690_residues MKGFSKLAWGALALLAAFCLGTVALRRGEHINALWIVVAAVSIYLIAYRFYSLFIADKVMQLDITRATPAVANNDGLDYV PTNKHVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGLLWLVVGVVFAGAVQDFVVLFLSSRRNGRSLGDLVREEMGQVPGT IALFGAFLIMIIILAVLAMVVVKALAESPWGMFTVIATMPIALMMGVYMRYIRVGKIGEISVVGLILLLGAIWLGGKVAA DPTWGPAFTFTAKQITWMLIGYGFVASVLPVWLLLAPRDYLSTFLKIGTILALAIGILVVMPDLKMPALTQFASTGDGPV WKGGIFPFLFITIACGAVSGFHALIASGTTPKLLANEGHMRYIGYGGMLMESFVAIMALVAASIIEPGIYFAMNSPASLV GSDTVAVAAKISEWGFSITPQVLEATARDIGEHSILARAGGAPTLAVGIAQILHQLLPGEDTMAFWYHFAILFEALFILT AVDAGTRAGRFMLQDLLGNFIPALKKTESWTANIIATAGCVALWGYLLYTGVIDPFGGIQTLWPLFGISNQMLAGIALML GAVVLFKMKRDRYAWVTIVPALWLLLCTTYAGLIKIFDSNPAQGFLAQAHKFQAAIASNTITAPAKTVPQMQQIVTNAYV NTGLTVLFLFVVGSILIYSIKTIVAARRNPQRTDRETPYVALQPHQMADL
Specific function: Unknown
COG id: COG1966
COG function: function code T; Carbon starvation protein, predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CstA family [H]
Homologues:
Organism=Escherichia coli, GI87082431, Length=704, Percent_Identity=66.3352272727273, Blast_Score=942, Evalue=0.0, Organism=Escherichia coli, GI1786814, Length=684, Percent_Identity=66.6666666666667, Blast_Score=897, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003706 [H]
Pfam domain/function: PF02554 CstA [H]
EC number: NA
Molecular weight: Translated: 74066; Mature: 74066
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFSKLAWGALALLAAFCLGTVALRRGEHINALWIVVAAVSIYLIAYRFYSLFIADKVM CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLDITRATPAVANNDGLDYVPTNKHVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGLLWLV HEEEHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VGVVFAGAVQDFVVLFLSSRRNGRSLGDLVREEMGQVPGTIALFGAFLIMIIILAVLAMV HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VVKALAESPWGMFTVIATMPIALMMGVYMRYIRVGKIGEISVVGLILLLGAIWLGGKVAA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEC DPTWGPAFTFTAKQITWMLIGYGFVASVLPVWLLLAPRDYLSTFLKIGTILALAIGILVV CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH MPDLKMPALTQFASTGDGPVWKGGIFPFLFITIACGAVSGFHALIASGTTPKLLANEGHM CCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCE RYIGYGGMLMESFVAIMALVAASIIEPGIYFAMNSPASLVGSDTVAVAAKISEWGFSITP EEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHCCCCCCH QVLEATARDIGEHSILARAGGAPTLAVGIAQILHQLLPGEDTMAFWYHFAILFEALFILT HHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AVDAGTRAGRFMLQDLLGNFIPALKKTESWTANIIATAGCVALWGYLLYTGVIDPFGGIQ HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TLWPLFGISNQMLAGIALMLGAVVLFKMKRDRYAWVTIVPALWLLLCTTYAGLIKIFDSN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PAQGFLAQAHKFQAAIASNTITAPAKTVPQMQQIVTNAYVNTGLTVLFLFVVGSILIYSI CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTIVAARRNPQRTDRETPYVALQPHQMADL HHHHHHCCCCCCCCCCCCEEEECCHHHCCC >Mature Secondary Structure MKGFSKLAWGALALLAAFCLGTVALRRGEHINALWIVVAAVSIYLIAYRFYSLFIADKVM CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLDITRATPAVANNDGLDYVPTNKHVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGLLWLV HEEEHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VGVVFAGAVQDFVVLFLSSRRNGRSLGDLVREEMGQVPGTIALFGAFLIMIIILAVLAMV HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VVKALAESPWGMFTVIATMPIALMMGVYMRYIRVGKIGEISVVGLILLLGAIWLGGKVAA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEC DPTWGPAFTFTAKQITWMLIGYGFVASVLPVWLLLAPRDYLSTFLKIGTILALAIGILVV CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH MPDLKMPALTQFASTGDGPVWKGGIFPFLFITIACGAVSGFHALIASGTTPKLLANEGHM CCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCE RYIGYGGMLMESFVAIMALVAASIIEPGIYFAMNSPASLVGSDTVAVAAKISEWGFSITP EEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHCCCCCCH QVLEATARDIGEHSILARAGGAPTLAVGIAQILHQLLPGEDTMAFWYHFAILFEALFILT HHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AVDAGTRAGRFMLQDLLGNFIPALKKTESWTANIIATAGCVALWGYLLYTGVIDPFGGIQ HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TLWPLFGISNQMLAGIALMLGAVVLFKMKRDRYAWVTIVPALWLLLCTTYAGLIKIFDSN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PAQGFLAQAHKFQAAIASNTITAPAKTVPQMQQIVTNAYVNTGLTVLFLFVVGSILIYSI CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTIVAARRNPQRTDRETPYVALQPHQMADL HHHHHHCCCCCCCCCCCCEEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]