| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243548
Identifier: 21243548
GI number: 21243548
Start: 3305527
End: 3306765
Strand: Reverse
Name: 21243548
Synonym: XAC2821
Alternate gene names: NA
Gene position: 3306765-3305527 (Counterclockwise)
Preceding gene: 21243554
Following gene: 21243547
Centisome position: 63.89
GC content: 69.09
Gene sequence:
>1239_bases GTGCCCCACATCATGCTGAAATCGGTTTGTCTGTCCCTTGCCTGCTTGCTCCTGCTGGCCGCCTGCGATCGGTCGGCGAC CTCGGCCGATGCAGCGGTTGCGCAGCAGAGTGGTGCAGGGCAGGCGGGCGATGGCGATCACATGGTGTCGGTGGATACGC CCGACCCGGTCCCGCCGTCGCGCCCGCGCACGCAGGCGGGCGAGGCAGGCTGGCCGCAGGCGGAACTGGAATCGGGCCAG GCCTGGATCAGCTGCGCGACCGATTACAGCCGCGAGGCCGGCGACGGCACGCTACTGCCGTCACTGGACCGGGCCAGCGT GGAAGCGGCGCTGGCGCCGTGTCGCGAGACCGGGCTGGTGCGGGTGCGCTACGCCGGCAAGATCAACGCAGGTTTTGCGG CCCTGGTGTGGCGTCTGGCCTCGGTCGCGGAGCAGTGGAAGTTGCCGCATCGCATCCTGGACCTGGATTCCAGTGGCGGG CAGGTGGAGGCGGCGATCCGCGCCGGCGACACCATCGGCGAATCCAACTGGACCATCTGGGTGCGCGAAGGCTCGATCTG CCACAGCGCCTGCGTGTTCGTGCTGGCGGCCGGCGACAACCGCCTGGTCGCCGGCAAGGTCGGTATTCACCGCATGATGC GGATCAGCTCCAAGGCGACCTCGCGCGCCGAGCTCAATCGCGAACTGCGCGAGGTCTACGGCAACGTCAAGGATTACCTG GAGCGCAACGGCGTGGCGGTGGCGGTGGCCGACCTGATGATGACCGTGCCCAACCGCAGCCTGCGCCTGCTCAGCATGGA AGAGTTGCGCGAATACGGGCTGGATGGCACCAATGCCGTGCAGGACGATCTGGAACGCATCCGCCAGATGCGCAAGTGCG GCGATGCCTTCGTGCGCCGCAAGGACGCGTTTCTGGTCGCCTTCGACCAAAAGTGCAAGGGCGAAGGCGCGGACCTGGAC GCGGTCAATGCCTGCGGCCTGGCCTTGAAGCAGCGCTTCGGCTTTCCGGATGCGGCCTGCCCGGAAGAAAGCCCGCTGGC CGAAACCGATGCCGCGGCGCTACCGGCCAGCCCGACGGCCGAGACGCAGACCGATGAGGCGCAGAACGGCCAGACACAGA ACGGCCAAGCCCAGCGCGATGCCGCAGGTGCGGCAACGCCTGCAGCCGAGCCGGACTCCGCGCCAGCACAGGATGCCGCC CAGGCCGGCCCGCCGTCCGCGCCGCACCCCGACGGCTGA
Upstream 100 bases:
>100_bases GCCGTTTTCGGACGCGGTTGCGGCGGACCTGCGCGTTCATGGCCGGGTCAACCCATCGATCCATTCAGCCATAGACTGCG GGTGATCTCCGTCGCGCTCC
Downstream 100 bases:
>100_bases GCGCAGTGATGGGCTTCACGCGCATCGCACTGCGCGCTGCCTATCGTCGCTGCATCACAACCGAGCCGGGGGGCGTATGC GAGGCAAGACCAAGGGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MPHIMLKSVCLSLACLLLLAACDRSATSADAAVAQQSGAGQAGDGDHMVSVDTPDPVPPSRPRTQAGEAGWPQAELESGQ AWISCATDYSREAGDGTLLPSLDRASVEAALAPCRETGLVRVRYAGKINAGFAALVWRLASVAEQWKLPHRILDLDSSGG QVEAAIRAGDTIGESNWTIWVREGSICHSACVFVLAAGDNRLVAGKVGIHRMMRISSKATSRAELNRELREVYGNVKDYL ERNGVAVAVADLMMTVPNRSLRLLSMEELREYGLDGTNAVQDDLERIRQMRKCGDAFVRRKDAFLVAFDQKCKGEGADLD AVNACGLALKQRFGFPDAACPEESPLAETDAAALPASPTAETQTDEAQNGQTQNGQAQRDAAGAATPAAEPDSAPAQDAA QAGPPSAPHPDG
Sequences:
>Translated_412_residues MPHIMLKSVCLSLACLLLLAACDRSATSADAAVAQQSGAGQAGDGDHMVSVDTPDPVPPSRPRTQAGEAGWPQAELESGQ AWISCATDYSREAGDGTLLPSLDRASVEAALAPCRETGLVRVRYAGKINAGFAALVWRLASVAEQWKLPHRILDLDSSGG QVEAAIRAGDTIGESNWTIWVREGSICHSACVFVLAAGDNRLVAGKVGIHRMMRISSKATSRAELNRELREVYGNVKDYL ERNGVAVAVADLMMTVPNRSLRLLSMEELREYGLDGTNAVQDDLERIRQMRKCGDAFVRRKDAFLVAFDQKCKGEGADLD AVNACGLALKQRFGFPDAACPEESPLAETDAAALPASPTAETQTDEAQNGQTQNGQAQRDAAGAATPAAEPDSAPAQDAA QAGPPSAPHPDG >Mature_411_residues PHIMLKSVCLSLACLLLLAACDRSATSADAAVAQQSGAGQAGDGDHMVSVDTPDPVPPSRPRTQAGEAGWPQAELESGQA WISCATDYSREAGDGTLLPSLDRASVEAALAPCRETGLVRVRYAGKINAGFAALVWRLASVAEQWKLPHRILDLDSSGGQ VEAAIRAGDTIGESNWTIWVREGSICHSACVFVLAAGDNRLVAGKVGIHRMMRISSKATSRAELNRELREVYGNVKDYLE RNGVAVAVADLMMTVPNRSLRLLSMEELREYGLDGTNAVQDDLERIRQMRKCGDAFVRRKDAFLVAFDQKCKGEGADLDA VNACGLALKQRFGFPDAACPEESPLAETDAAALPASPTAETQTDEAQNGQTQNGQAQRDAAGAATPAAEPDSAPAQDAAQ AGPPSAPHPDG
Specific function: Unknown
COG id: COG3904
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43530; Mature: 43399
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHIMLKSVCLSLACLLLLAACDRSATSADAAVAQQSGAGQAGDGDHMVSVDTPDPVPPS CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC RPRTQAGEAGWPQAELESGQAWISCATDYSREAGDGTLLPSLDRASVEAALAPCRETGLV CCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEE RVRYAGKINAGFAALVWRLASVAEQWKLPHRILDLDSSGGQVEAAIRAGDTIGESNWTIW EEEECCCCCCCHHHHHHHHHHHHHHHCCCHHEEECCCCCCEEEEEEECCCCCCCCCCEEE VREGSICHSACVFVLAAGDNRLVAGKVGIHRMMRISSKATSRAELNRELREVYGNVKDYL EECCCHHHHEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERNGVAVAVADLMMTVPNRSLRLLSMEELREYGLDGTNAVQDDLERIRQMRKCGDAFVRR HHCCCEEEHHHHHHHCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC KDAFLVAFDQKCKGEGADLDAVNACGLALKQRFGFPDAACPEESPLAETDAAALPASPTA CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC ETQTDEAQNGQTQNGQAQRDAAGAATPAAEPDSAPAQDAAQAGPPSAPHPDG CCCCCHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC >Mature Secondary Structure PHIMLKSVCLSLACLLLLAACDRSATSADAAVAQQSGAGQAGDGDHMVSVDTPDPVPPS CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC RPRTQAGEAGWPQAELESGQAWISCATDYSREAGDGTLLPSLDRASVEAALAPCRETGLV CCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEE RVRYAGKINAGFAALVWRLASVAEQWKLPHRILDLDSSGGQVEAAIRAGDTIGESNWTIW EEEECCCCCCCHHHHHHHHHHHHHHHCCCHHEEECCCCCCEEEEEEECCCCCCCCCCEEE VREGSICHSACVFVLAAGDNRLVAGKVGIHRMMRISSKATSRAELNRELREVYGNVKDYL EECCCHHHHEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERNGVAVAVADLMMTVPNRSLRLLSMEELREYGLDGTNAVQDDLERIRQMRKCGDAFVRR HHCCCEEEHHHHHHHCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC KDAFLVAFDQKCKGEGADLDAVNACGLALKQRFGFPDAACPEESPLAETDAAALPASPTA CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC ETQTDEAQNGQTQNGQAQRDAAGAATPAAEPDSAPAQDAAQAGPPSAPHPDG CCCCCHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA