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The map label for this gene is 21243525

Identifier: 21243525

GI number: 21243525

Start: 3279288

End: 3279884

Strand: Reverse

Name: 21243525

Synonym: XAC2798

Alternate gene names: NA

Gene position: 3279884-3279288 (Counterclockwise)

Preceding gene: 21243526

Following gene: 21243524

Centisome position: 63.37

GC content: 64.99

Gene sequence:

>597_bases
ATGACCAAGGCAAAAAAGAAATCCGCTCAGCAAGCGCTGCAATCACCTGCGCCGTTGTATCAACTGCATGTGGCATTGAC
CGGCAGTGCGCCGCCGATCTGGCGGCGCCTGCTGGTGTCGGGCGCAGTACGCCTGGCCACGCTGCATCGCGTGTTGCAGC
CGGTAATGGGCTGGAATGGCGCCCATCCGTACGAGTTCGACTTCGGCGGCGGGCGTTACGGCGAATCCGGGCTGGATGTG
CCCGAGCGCCCCCGGCTCAAGCACGCCGGGCGTGTCACGCTGGAAAGCGCGGTGGGCGAACTTAATGGCTTCGATTACTT
CTACGGCGCCGGCCCTGGCTGGCAGCATCGCCTGCAAGTGGAAGCGCTGTTGCCGCCAGATGCGAGTCTGCGCGTAGCGC
GCTGCGTGGACGGGGCCCATGCCTGCCCGCCAGATAGCAGTGGCGGTATTGCCGATTATCGGGTGCTGGTGCAGATCATC
GCCGACCCGGACCATCCGCAGCATGTGCAGGAATTGGCGACCTTGGGCGGGCGCTTCGAGCCCGGGCATTTCGATCTGGC
AGAGGTCAATCGCTTGCTCGCGCGCGTGCGCGAGTGA

Upstream 100 bases:

>100_bases
CCTGGCGGTTGCGCTGTTGTTTTATCGCTGATCTAAACAGCGTCTGCATTCGCCTGCCTCGCACGCCATACTGATAACGG
GCAGACGAATGCACGACACG

Downstream 100 bases:

>100_bases
CAGCGGTGGGCGCCTCATGGGCGAAGGCGCTACAAACCTCGCCTCTTGTTCTCCTCGCCAGGGCTTGACGCCTTGCGTGG
CCTGATCAGGCCGCGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTKAKKKSAQQALQSPAPLYQLHVALTGSAPPIWRRLLVSGAVRLATLHRVLQPVMGWNGAHPYEFDFGGGRYGESGLDV
PERPRLKHAGRVTLESAVGELNGFDYFYGAGPGWQHRLQVEALLPPDASLRVARCVDGAHACPPDSSGGIADYRVLVQII
ADPDHPQHVQELATLGGRFEPGHFDLAEVNRLLARVRE

Sequences:

>Translated_198_residues
MTKAKKKSAQQALQSPAPLYQLHVALTGSAPPIWRRLLVSGAVRLATLHRVLQPVMGWNGAHPYEFDFGGGRYGESGLDV
PERPRLKHAGRVTLESAVGELNGFDYFYGAGPGWQHRLQVEALLPPDASLRVARCVDGAHACPPDSSGGIADYRVLVQII
ADPDHPQHVQELATLGGRFEPGHFDLAEVNRLLARVRE
>Mature_197_residues
TKAKKKSAQQALQSPAPLYQLHVALTGSAPPIWRRLLVSGAVRLATLHRVLQPVMGWNGAHPYEFDFGGGRYGESGLDVP
ERPRLKHAGRVTLESAVGELNGFDYFYGAGPGWQHRLQVEALLPPDASLRVARCVDGAHACPPDSSGGIADYRVLVQIIA
DPDHPQHVQELATLGGRFEPGHFDLAEVNRLLARVRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.rhizogenes plasmid pRia4B ORF-3 in virA region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012912 [H]

Pfam domain/function: PF07929 PRiA4_ORF3 [H]

EC number: NA

Molecular weight: Translated: 21594; Mature: 21463

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKAKKKSAQQALQSPAPLYQLHVALTGSAPPIWRRLLVSGAVRLATLHRVLQPVMGWNG
CCCHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AHPYEFDFGGGRYGESGLDVPERPRLKHAGRVTLESAVGELNGFDYFYGAGPGWQHRLQV
CCCCEECCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCEEECCCCCCCEEEEE
EALLPPDASLRVARCVDGAHACPPDSSGGIADYRVLVQIIADPDHPQHVQELATLGGRFE
EEECCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
PGHFDLAEVNRLLARVRE
CCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKAKKKSAQQALQSPAPLYQLHVALTGSAPPIWRRLLVSGAVRLATLHRVLQPVMGWNG
CCHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AHPYEFDFGGGRYGESGLDVPERPRLKHAGRVTLESAVGELNGFDYFYGAGPGWQHRLQV
CCCCEECCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCEEECCCCCCCEEEEE
EALLPPDASLRVARCVDGAHACPPDSSGGIADYRVLVQIIADPDHPQHVQELATLGGRFE
EEECCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
PGHFDLAEVNRLLARVRE
CCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]