| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243523
Identifier: 21243523
GI number: 21243523
Start: 3275101
End: 3277074
Strand: Direct
Name: 21243523
Synonym: XAC2796
Alternate gene names: NA
Gene position: 3275101-3277074 (Clockwise)
Preceding gene: 21243520
Following gene: 21243530
Centisome position: 63.28
GC content: 64.74
Gene sequence:
>1974_bases ATGGAGGGCGCGCAGAAGCCCGGTGCAAGCGGCACAAGCTGGTCCAGGCCTCGGCCGCGCCCGCCTGGCGGTGAGCGCCG TCGACTTATTGGCTGCCCTACACCAATGGCGGATGCGCCCGCGCGCGCAGATGCCTATGCTGGCGGTTTGATTCCACCAG GACCCACGATGCGTCAACGCCTGCTTGTCCTCGCCCTGCTCACCGGCCTCACCGCCTGCCAGCAACAGCCCCAATCGCCG CGCGCCGATGCAACCGCGCCTGCCGCCAACCAAGCACAGACCCCAGATGCGCGCTTTGCCGCATTATCCAAGCAGGCCCT GGACACCTGGATGCAGCTGTCGCCGGTGACCGCCACCCAGACCGGCGACCACCGCTTCGATGCGCAGATCGACGACCTGA GCGCCGGCGGCCGTCAGCGCAGCGTGGACGCGGGCAAGAAGCTGCTGGCCACCCTGGATGCGATCGAGGTAGCCAAGCTC TCGCGCGAGAACCAGGTGGATGCGGTCATTCTGCGCAACCAACTGCAATCGGAGATCTGGAACACCGAGGTGCTGCAAAG CTGGGCCTGGGACCCGCAGGTCTACAACGGCCTGGCCGGCAGCGCGCTGTACAGCCTGATGGCGCGCGAATTCGCGCCGC TGCCCGAGCGCCTGACCGCGGCCACCCAGCGCATGGAAAAGATCCCGAGCATCTTTGCGCAGGCACGCGAGAACCTGGAT CCGGCGCGCGTGCCGAAGATCCATGCCGAAACGGTGGCCAAGCAGAACAAGGGCATCCTGAGCATCGTCGACAGCTTCAT CGCCCCCAACATCAGCCAGCTTGGCCCGATCGAGGCGGCGCGTGCGCAGGCGGCCATCGACAACCTGCGCAAGGCAGTGG CCGAGCAGCAGACCTGGCTGGACACCGTGCTGGTGCCCAATGCCAAGGGCGACTTCCGCATCGGTGCCGAAAAATACGAC CAGAAGTTGAAATTCGCGCTGCTGTCGTCGCTGTCGCGTGCCGATATCAAACAGCGTGCCGAATCCGAGCTCAAGCGCGT GCGTAGCGACATGTACCGGATCGCGCGCACCGTGCTCAAGGACACGCCCGGCGCGCCCAAGTTGCCCGAATCGCCCAACG ACGACCAGCAGCAGGCGGCGATCGAAGCGGCCCTGGAACTGGCGTATGCCGACAAGCCGGCGCGCGACAAGGTGGTGGAC GCGGCCAAGGCGGCGCTGGCCCAATCGACCGAATTCGTGCGACAGAAGGATTTGATGACGCTGCCCGATTCGCCGGTGGA CATCATCCTGATGCCGGAATTCCAGCGTGGCGTGGCGGTTGCGTATTGCGATTCGCCCGGCCCGCTCGACAAGAACCTGA AGACGTTCTACGCGGTGTCGCCGATTCCCGACGACTGGAACGACAAACAGGTCGATTCGTTCCTGCGCGAATACAACACC CGCATGATCCAGCTGCTCAGCATCCATGAGGGCACGCCGGGGCACTACCTGGAAGGCTGGCATTCGGCCAAGTTCCCCTC CACGCTGCGCGCGGTGCTGCGTTCGGGCATGTTCGCCGAAGGCTGGGCGGTATACACCGAGCGCATGATGCAGGAGCAAG GCTACCTGGATAACGACCCGCTGTTCCATCTGGTGCAGCTCAAGTTCTACCTGCGCACCATTGCCAATGCCATTCTCGAC CAGGGCGTGCATGTGGACGGCTGGGATCGCGACAGGGCGATGCACCTGATGACCCACGACACCTTCCAGCAGGAAAGCGA AGCCTCAGGCAAGTGGGTGCGTGCGCAGCTCTCCTCCGCGCAGCTCCCGACCTACTTCGTCGGCGTGCAGGAACATCTGG ACACGCGCAAGGCGGTACAGGACAAGCTCGGCGAGACGTTCAACCTGAAGGCCTATCACGACAAGATGCTGTCGTACGGC GCCCCGCCGGTACGCTTCGCCCGCGAGCTGATGCTGGATCAGCCGATCGAGTGA
Upstream 100 bases:
>100_bases CGCCCGCAAGGTGCACCCGTCGTGTGCCCCGGGCGATCGCGCCACTGCACGGCTGGCAGGATCGGAGCGGCCACCCACAC GTGAGGCTCTGTCAGGGAAC
Downstream 100 bases:
>100_bases TTGGTCCTGCTCCCGCGCGCGGGAGAAGGTGCCCGCAGGGGCGGATGAGGGGGCGCCTGGCGAAGGTGTGACCGCCTGCG ATGTCAAACGCGTCGCTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 657; Mature: 657
Protein sequence:
>657_residues MEGAQKPGASGTSWSRPRPRPPGGERRRLIGCPTPMADAPARADAYAGGLIPPGPTMRQRLLVLALLTGLTACQQQPQSP RADATAPAANQAQTPDARFAALSKQALDTWMQLSPVTATQTGDHRFDAQIDDLSAGGRQRSVDAGKKLLATLDAIEVAKL SRENQVDAVILRNQLQSEIWNTEVLQSWAWDPQVYNGLAGSALYSLMAREFAPLPERLTAATQRMEKIPSIFAQARENLD PARVPKIHAETVAKQNKGILSIVDSFIAPNISQLGPIEAARAQAAIDNLRKAVAEQQTWLDTVLVPNAKGDFRIGAEKYD QKLKFALLSSLSRADIKQRAESELKRVRSDMYRIARTVLKDTPGAPKLPESPNDDQQQAAIEAALELAYADKPARDKVVD AAKAALAQSTEFVRQKDLMTLPDSPVDIILMPEFQRGVAVAYCDSPGPLDKNLKTFYAVSPIPDDWNDKQVDSFLREYNT RMIQLLSIHEGTPGHYLEGWHSAKFPSTLRAVLRSGMFAEGWAVYTERMMQEQGYLDNDPLFHLVQLKFYLRTIANAILD QGVHVDGWDRDRAMHLMTHDTFQQESEASGKWVRAQLSSAQLPTYFVGVQEHLDTRKAVQDKLGETFNLKAYHDKMLSYG APPVRFARELMLDQPIE
Sequences:
>Translated_657_residues MEGAQKPGASGTSWSRPRPRPPGGERRRLIGCPTPMADAPARADAYAGGLIPPGPTMRQRLLVLALLTGLTACQQQPQSP RADATAPAANQAQTPDARFAALSKQALDTWMQLSPVTATQTGDHRFDAQIDDLSAGGRQRSVDAGKKLLATLDAIEVAKL SRENQVDAVILRNQLQSEIWNTEVLQSWAWDPQVYNGLAGSALYSLMAREFAPLPERLTAATQRMEKIPSIFAQARENLD PARVPKIHAETVAKQNKGILSIVDSFIAPNISQLGPIEAARAQAAIDNLRKAVAEQQTWLDTVLVPNAKGDFRIGAEKYD QKLKFALLSSLSRADIKQRAESELKRVRSDMYRIARTVLKDTPGAPKLPESPNDDQQQAAIEAALELAYADKPARDKVVD AAKAALAQSTEFVRQKDLMTLPDSPVDIILMPEFQRGVAVAYCDSPGPLDKNLKTFYAVSPIPDDWNDKQVDSFLREYNT RMIQLLSIHEGTPGHYLEGWHSAKFPSTLRAVLRSGMFAEGWAVYTERMMQEQGYLDNDPLFHLVQLKFYLRTIANAILD QGVHVDGWDRDRAMHLMTHDTFQQESEASGKWVRAQLSSAQLPTYFVGVQEHLDTRKAVQDKLGETFNLKAYHDKMLSYG APPVRFARELMLDQPIE >Mature_657_residues MEGAQKPGASGTSWSRPRPRPPGGERRRLIGCPTPMADAPARADAYAGGLIPPGPTMRQRLLVLALLTGLTACQQQPQSP RADATAPAANQAQTPDARFAALSKQALDTWMQLSPVTATQTGDHRFDAQIDDLSAGGRQRSVDAGKKLLATLDAIEVAKL SRENQVDAVILRNQLQSEIWNTEVLQSWAWDPQVYNGLAGSALYSLMAREFAPLPERLTAATQRMEKIPSIFAQARENLD PARVPKIHAETVAKQNKGILSIVDSFIAPNISQLGPIEAARAQAAIDNLRKAVAEQQTWLDTVLVPNAKGDFRIGAEKYD QKLKFALLSSLSRADIKQRAESELKRVRSDMYRIARTVLKDTPGAPKLPESPNDDQQQAAIEAALELAYADKPARDKVVD AAKAALAQSTEFVRQKDLMTLPDSPVDIILMPEFQRGVAVAYCDSPGPLDKNLKTFYAVSPIPDDWNDKQVDSFLREYNT RMIQLLSIHEGTPGHYLEGWHSAKFPSTLRAVLRSGMFAEGWAVYTERMMQEQGYLDNDPLFHLVQLKFYLRTIANAILD QGVHVDGWDRDRAMHLMTHDTFQQESEASGKWVRAQLSSAQLPTYFVGVQEHLDTRKAVQDKLGETFNLKAYHDKMLSYG APPVRFARELMLDQPIE
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72850; Mature: 72850
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGAQKPGASGTSWSRPRPRPPGGERRRLIGCPTPMADAPARADAYAGGLIPPGPTMRQR CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHHH LLVLALLTGLTACQQQPQSPRADATAPAANQAQTPDARFAALSKQALDTWMQLSPVTATQ HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECC TGDHRFDAQIDDLSAGGRQRSVDAGKKLLATLDAIEVAKLSRENQVDAVILRNQLQSEIW CCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC NTEVLQSWAWDPQVYNGLAGSALYSLMAREFAPLPERLTAATQRMEKIPSIFAQARENLD CHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PARVPKIHAETVAKQNKGILSIVDSFIAPNISQLGPIEAARAQAAIDNLRKAVAEQQTWL HHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH DTVLVPNAKGDFRIGAEKYDQKLKFALLSSLSRADIKQRAESELKRVRSDMYRIARTVLK HHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTPGAPKLPESPNDDQQQAAIEAALELAYADKPARDKVVDAAKAALAQSTEFVRQKDLMT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC LPDSPVDIILMPEFQRGVAVAYCDSPGPLDKNLKTFYAVSPIPDDWNDKQVDSFLREYNT CCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH RMIQLLSIHEGTPGHYLEGWHSAKFPSTLRAVLRSGMFAEGWAVYTERMMQEQGYLDNDP HHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCH LFHLVQLKFYLRTIANAILDQGVHVDGWDRDRAMHLMTHDTFQQESEASGKWVRAQLSSA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCC QLPTYFVGVQEHLDTRKAVQDKLGETFNLKAYHDKMLSYGAPPVRFARELMLDQPIE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MEGAQKPGASGTSWSRPRPRPPGGERRRLIGCPTPMADAPARADAYAGGLIPPGPTMRQR CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHHH LLVLALLTGLTACQQQPQSPRADATAPAANQAQTPDARFAALSKQALDTWMQLSPVTATQ HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECC TGDHRFDAQIDDLSAGGRQRSVDAGKKLLATLDAIEVAKLSRENQVDAVILRNQLQSEIW CCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC NTEVLQSWAWDPQVYNGLAGSALYSLMAREFAPLPERLTAATQRMEKIPSIFAQARENLD CHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PARVPKIHAETVAKQNKGILSIVDSFIAPNISQLGPIEAARAQAAIDNLRKAVAEQQTWL HHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH DTVLVPNAKGDFRIGAEKYDQKLKFALLSSLSRADIKQRAESELKRVRSDMYRIARTVLK HHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTPGAPKLPESPNDDQQQAAIEAALELAYADKPARDKVVDAAKAALAQSTEFVRQKDLMT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC LPDSPVDIILMPEFQRGVAVAYCDSPGPLDKNLKTFYAVSPIPDDWNDKQVDSFLREYNT CCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH RMIQLLSIHEGTPGHYLEGWHSAKFPSTLRAVLRSGMFAEGWAVYTERMMQEQGYLDNDP HHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCH LFHLVQLKFYLRTIANAILDQGVHVDGWDRDRAMHLMTHDTFQQESEASGKWVRAQLSSA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCC QLPTYFVGVQEHLDTRKAVQDKLGETFNLKAYHDKMLSYGAPPVRFARELMLDQPIE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA