| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243520
Identifier: 21243520
GI number: 21243520
Start: 3273206
End: 3273538
Strand: Direct
Name: 21243520
Synonym: XAC2793
Alternate gene names: NA
Gene position: 3273206-3273538 (Clockwise)
Preceding gene: 21243519
Following gene: 21243523
Centisome position: 63.24
GC content: 60.96
Gene sequence:
>333_bases ATGCCTAGGCTTGATGTCCCCAATCCACAGGACATTCCCATGCCTACCCTCCGCATGCGCATCACCGGCACCGACGACGA CGCGCGTGCCATTGCCAACCTGCTGCAAAGCATCGACGGCATCGAGCACGTGGAAGAAGTGGACGATCTGATGCCGCACC TGGACGACGAAGATTCCAGCTCGGCAGGCCTGTCGGACGACGAAGGTCCGGGCAGCCACGAGTTCGAAGTGGAAGCCGGC AATGAGGCCACCGCGCAGAAGGTCCGCGACGCGGTGCAAGAACTGGCACTGCAGCTGGACGTGTTTGTGGAATACGAAGT CGACGAAGGTTGA
Upstream 100 bases:
>100_bases AGGCCGCGCGTTGCATGCCGAGCCCCTCACAAGCCAGGCATGGCCGGCACAGCCCGCGTGACGCAAGCAACGCACACCAT CACCTCGTTTTGTCCTCGCG
Downstream 100 bases:
>100_bases GCCGGGCTCAGCCTACGTGCGGCCACAGTGCTGCATTGCTGGATCGCACGTGATGCCGTGATGCGTCCTGCTGCATTTGG GCATGCCGCCAAGCCTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MPRLDVPNPQDIPMPTLRMRITGTDDDARAIANLLQSIDGIEHVEEVDDLMPHLDDEDSSSAGLSDDEGPGSHEFEVEAG NEATAQKVRDAVQELALQLDVFVEYEVDEG
Sequences:
>Translated_110_residues MPRLDVPNPQDIPMPTLRMRITGTDDDARAIANLLQSIDGIEHVEEVDDLMPHLDDEDSSSAGLSDDEGPGSHEFEVEAG NEATAQKVRDAVQELALQLDVFVEYEVDEG >Mature_109_residues PRLDVPNPQDIPMPTLRMRITGTDDDARAIANLLQSIDGIEHVEEVDDLMPHLDDEDSSSAGLSDDEGPGSHEFEVEAGN EATAQKVRDAVQELALQLDVFVEYEVDEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12059; Mature: 11928
Theoretical pI: Translated: 3.67; Mature: 3.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLDVPNPQDIPMPTLRMRITGTDDDARAIANLLQSIDGIEHVEEVDDLMPHLDDEDSS CCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCC SAGLSDDEGPGSHEFEVEAGNEATAQKVRDAVQELALQLDVFVEYEVDEG CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEECCC >Mature Secondary Structure PRLDVPNPQDIPMPTLRMRITGTDDDARAIANLLQSIDGIEHVEEVDDLMPHLDDEDSS CCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCC SAGLSDDEGPGSHEFEVEAGNEATAQKVRDAVQELALQLDVFVEYEVDEG CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA